mRNA_L-elsbetiae_contig10221.269.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10221.269.1 vs. uniprot
Match: D8LMF2_ECTSI (Similar to Isochorismate Synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF2_ECTSI) HSP 1 Score: 158 bits (399), Expect = 6.130e-43 Identity = 74/92 (80.43%), Postives = 85/92 (92.39%), Query Frame = 1 Query: 1 LLCARRGLLVVGGLVGPEERADARHLAATLGWPVYADVTSGLRRWAATVGLGVGRLEQLLQDDAVKDSLAPDAILQVGSPLISKRVQKFIAE 276 LLCARRG+L+VG L+GPEERAD RHLA TL WPVYADVTSGLR W+A +GLGVGRL+QLLQDDAVK+++APDA+LQVGSPL SKRVQKFI+E Sbjct: 1147 LLCARRGILIVGSLIGPEERADVRHLAVTLRWPVYADVTSGLRCWSAEMGLGVGRLDQLLQDDAVKEAIAPDAVLQVGSPLTSKRVQKFISE 1238
BLAST of mRNA_L-elsbetiae_contig10221.269.1 vs. uniprot
Match: A0A6H5JV35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV35_9PHAE) HSP 1 Score: 103 bits (256), Expect = 1.210e-23 Identity = 49/59 (83.05%), Postives = 57/59 (96.61%), Query Frame = 1 Query: 100 VYADVTSGLRRWAATVGLGVGRLEQLLQDDAVKDSLAPDAILQVGSPLISKRVQKFIAE 276 VYADVTSGLR W+A +GLGVGRL+QLLQDDAVK+++APDA+LQVGSPLISKRVQKFI+E Sbjct: 908 VYADVTSGLRCWSAEMGLGVGRLDQLLQDDAVKEAIAPDAVLQVGSPLISKRVQKFISE 966
BLAST of mRNA_L-elsbetiae_contig10221.269.1 vs. uniprot
Match: A0A4D9D2W1_9STRA (MR_MLE domain-containing protein n=6 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2W1_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 2.420e-16 Identity = 44/87 (50.57%), Postives = 56/87 (64.37%), Query Frame = 1 Query: 10 ARRGLLVVGGLVGPEERADARHLAATLGWPVYADVTSGLRRWAATVGLGVGRLEQLLQDDAVKDSLAPDAILQVGSPLISKRVQKFI 270 A+RGLLV+G L +RA R LA L WP++AD+ SGLR A L V E LL D + +L PD ILQ+GSPL+SKR+ KF+ Sbjct: 773 AQRGLLVIGRLPQRRDRAHVRWLAQGLRWPIFADMGSGLRCDPALKHLLVAPYESLLADPLISSALDPDVILQIGSPLVSKRLPKFM 859
BLAST of mRNA_L-elsbetiae_contig10221.269.1 vs. uniprot
Match: A0A8J5XVK9_DIALT (MR_MLE domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XVK9_DIALT) HSP 1 Score: 78.2 bits (191), Expect = 7.460e-15 Identity = 41/89 (46.07%), Postives = 53/89 (59.55%), Query Frame = 1 Query: 10 ARRGLLVVGGLVGPEERADARHLAATLGWPVYADVTSGLRRWAATVGLGVGRLEQLLQDDAVKDSLAPDAILQVGSPLISKRVQKFIAE 276 ARRGLLV L +R LAA L WP+YAD+TSGLR A+ L +G L+Q L + V LAPD ++Q G+ +ISKR + E Sbjct: 848 ARRGLLVAASLPCAADREAVAQLAAWLQWPLYADLTSGLRLGCASASLVLGSLDQSLHSEIVARGLAPDVVVQFGTRIISKRAAALLGE 936
BLAST of mRNA_L-elsbetiae_contig10221.269.1 vs. uniprot
Match: A0A3C1KYI8_9DELT (2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (Fragment) n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A3C1KYI8_9DELT) HSP 1 Score: 76.3 bits (186), Expect = 3.170e-14 Identity = 41/89 (46.07%), Postives = 56/89 (62.92%), Query Frame = 1 Query: 1 LLCARRGLLVVGGLVGPEERADARHLAATLGWPVYADVTSGLRRWAATVGLGVGRLEQLLQDDAVKDSLAPDAILQVGSPLISKRVQKF 267 L A+RG+L++GGL E RA A LA TLGWPV+AD+TSGLR G +G L+ L S PD +L+VG ++S+RVQ++ Sbjct: 236 LALAQRGMLLIGGLDDDEGRAKAHELAMTLGWPVWADITSGLR--GTLDGAHLGLLDAALSGSDGLWSETPDVVLRVGGTIVSERVQRW 322
BLAST of mRNA_L-elsbetiae_contig10221.269.1 vs. uniprot
Match: A0A2E7ZPT8_9DELT (2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2E7ZPT8_9DELT) HSP 1 Score: 76.3 bits (186), Expect = 3.370e-14 Identity = 41/89 (46.07%), Postives = 56/89 (62.92%), Query Frame = 1 Query: 1 LLCARRGLLVVGGLVGPEERADARHLAATLGWPVYADVTSGLRRWAATVGLGVGRLEQLLQDDAVKDSLAPDAILQVGSPLISKRVQKF 267 L A+RG+L++GGL E RA A LA TLGWPV+AD+TSGLR G +G L+ L S PD +L+VG ++S+RVQ++ Sbjct: 237 LALAQRGMLLIGGLDDDEGRAKAHELAMTLGWPVWADITSGLR--GTLDGAHLGLLDAALSGSDGLWSETPDVVLRVGGTIVSERVQRW 323
BLAST of mRNA_L-elsbetiae_contig10221.269.1 vs. uniprot
Match: UPI0003B37C42 (2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase n=1 Tax=Salisaeta longa TaxID=503170 RepID=UPI0003B37C42) HSP 1 Score: 74.3 bits (181), Expect = 1.600e-13 Identity = 39/86 (45.35%), Postives = 57/86 (66.28%), Query Frame = 1 Query: 16 RGLLVVGGLVGPEERADARHLAATLGWPVYADVTSGLRRWAATVGLGVGRLEQLLQDDAVKDSLAPDAILQVGSPLISKRVQKFIA 273 RGL+V G L ++RA A+ +AA LGWP+ ADVTSGLR A L + +QLL DA + AP+A+L +G +SKR+++++A Sbjct: 238 RGLVVAGRLDTADDRAAAQRMAAHLGWPLVADVTSGLRT-GAVEALRIAYADQLLAADAFANRHAPEAVLHLGGRAVSKRLRQYLA 322
BLAST of mRNA_L-elsbetiae_contig10221.269.1 vs. uniprot
Match: A0A830HGP7_9CHLO (MR_MLE domain-containing protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HGP7_9CHLO) HSP 1 Score: 70.1 bits (170), Expect = 5.170e-12 Identity = 39/89 (43.82%), Postives = 54/89 (60.67%), Query Frame = 1 Query: 16 RGLLVVGGLVGPEERADARHLAATLGWPVYADVTSGLRRWAATVGLGVGRLEQLL----QDDAVKDSLAPDAILQVGSPLISKRVQKFI 270 RGL+V G +G EE A LAA LGWP+ AD +SGLR A + L+Q L +D + D++ PDA++Q+G+P SKRVQ + Sbjct: 869 RGLVVAGACLGAEEAVGAAKLAAELGWPLVADASSGLRVGGAGAA-PLAALDQALLACEKDATLWDAVMPDAVVQIGAPPTSKRVQSML 956
BLAST of mRNA_L-elsbetiae_contig10221.269.1 vs. uniprot
Match: A0A1V5PXN4_9ACTN (Elongation factor 4 n=1 Tax=Actinobacteria bacterium ADurb.Bin346 TaxID=1852788 RepID=A0A1V5PXN4_9ACTN) HSP 1 Score: 67.4 bits (163), Expect = 4.390e-11 Identity = 33/86 (38.37%), Postives = 50/86 (58.14%), Query Frame = 1 Query: 19 GLLVVGGLVGPEERADARHLAATLGWPVYADVTSGLRRWAATVGLGVGRLEQLLQDDAVKDSLAPDAILQVGSPLISKRVQKFIAE 276 G++ VG L+ E+R LGWPVYAD+TSGLR + + +Q L D AV + AP A++ +G P+ SKR +F+++ Sbjct: 233 GIISVGRLLCDEDRHAVAEFCLKLGWPVYADITSGLRLGGIGTNI-IKHFDQQLLDTAVNKAAAPSAVIHIGGPVTSKRYCQFLSQ 317
BLAST of mRNA_L-elsbetiae_contig10221.269.1 vs. uniprot
Match: A0A847GBH8_9BACT (2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Candidatus Hydrogenedens sp. TaxID=2654184 RepID=A0A847GBH8_9BACT) HSP 1 Score: 65.5 bits (158), Expect = 2.070e-10 Identity = 38/92 (41.30%), Postives = 51/92 (55.43%), Query Frame = 1 Query: 1 LLCARRGLLVVGGLVGPEERADARHLAATLGWPVYADVTSGLRRWAATVGLGV-GRLEQLLQDDAVKDSLAPDAILQVGSPLISKRVQKFIA 273 L +RGLLV G L G + A LA TLGWPV AD+TSGLR T G V +Q+L A + + PD +L +G SKR+ + ++ Sbjct: 220 LAAVKRGLLVAGELRGAAQTAAVAELAKTLGWPVCADITSGLR--LGTDGAPVLAHYDQMLLSPAFRGAFTPDFVLHLGGAFTSKRLLEHLS 309 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10221.269.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10221.269.1 >prot_L-elsbetiae_contig10221.269.1 ID=prot_L-elsbetiae_contig10221.269.1|Name=mRNA_L-elsbetiae_contig10221.269.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=92bp LLCARRGLLVVGGLVGPEERADARHLAATLGWPVYADVTSGLRRWAATVGback to top mRNA from alignment at L-elsbetiae_contig10221:2058..4471- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10221.269.1 ID=mRNA_L-elsbetiae_contig10221.269.1|Name=mRNA_L-elsbetiae_contig10221.269.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2414bp|location=Sequence derived from alignment at L-elsbetiae_contig10221:2058..4471- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10221:2058..4471- >mRNA_L-elsbetiae_contig10221.269.1 ID=mRNA_L-elsbetiae_contig10221.269.1|Name=mRNA_L-elsbetiae_contig10221.269.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=552bp|location=Sequence derived from alignment at L-elsbetiae_contig10221:2058..4471- (Laminarionema elsbetiae ELsaHSoW15)back to top |