mRNA_L-elsbetiae_contig13251.2528.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13251.2528.1 vs. uniprot
Match: D8LB36_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB36_ECTSI) HSP 1 Score: 84.7 bits (208), Expect = 6.390e-16 Identity = 68/177 (38.42%), Postives = 88/177 (49.72%), Query Frame = 2 Query: 14 IMLTNAGVVDTGIALVRAAACCSEVAVKCLLQQLEREAFPTDLVRYVNFRDDSGCTAVFRSINFGAQIGGVRLPPSPTKVVRLLVDAGADTTSAVRAKDIAGIFQNFGTPLAHTNALLGEKKFEG*TR--QRSS*IRWKPSAGCFCV*RQRMPFLGCGPAAMSPLSPRLQGLQPRPP 538 ++LT+AGVVDTG AL+ AA V+V+ LLQ+ ++ A + YVN G T + SI P +++ RLLVDAGADTTS V D+ G TP + KK EG SS W+PSA C C +Q + LGCG A + P LQ Q PP Sbjct: 164 LLLTDAGVVDTGGALITAAHYGGVVSVEHLLQRQKQTA--AERKAYVNAPGLFGATPLLWSIQ--------ACRPCSSRIARLLVDAGADTTSTVTMADVQGFGLMAYTPKEIAIRRIRRKKVEGKEDIVATSSCAAWRPSAACCCKWKQFVRSLGCGLATIPPSLTLLQRAQAEPP 330
BLAST of mRNA_L-elsbetiae_contig13251.2528.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI) HSP 1 Score: 69.3 bits (168), Expect = 2.740e-10 Identity = 52/124 (41.94%), Postives = 69/124 (55.65%), Query Frame = 2 Query: 17 MLTNAGVVDTGIALVRAAACCSEVAVKCLLQQLEREAFPTDLVRYVNFRDDSGCTAVFRSINFGAQIGGVRLPPSPTKVVRLLVDAGADTTSAVRAKDIAGIFQNFGTPLAHTNALLGEKKFEG 388 +LT+AGVVDTG AL +A E +VK LLQ + P YVN RD +G T + SI + GV S +V RLLV+AGADTT+ +R + G+ TPL T +L +KK +G Sbjct: 221 LLTHAGVVDTGQALTISAGLGREASVKYLLQNHAKHYGPG---AYVNVRDRNGTTPLLSSI----YVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLKLTVHILQDKKVDG 337
BLAST of mRNA_L-elsbetiae_contig13251.2528.1 vs. uniprot
Match: D7FYA6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYA6_ECTSI) HSP 1 Score: 68.6 bits (166), Expect = 5.780e-10 Identity = 53/124 (42.74%), Postives = 69/124 (55.65%), Query Frame = 2 Query: 8 ITIMLTNAGVVDTGIALVRAAACCSEVAVKCLLQQLEREAFPTDLVRYVNFRDDSGCTAVFRSINFGAQIGGVRLPPSPTKVVRLLVDAGADTTSAVRAKDIAGIFQNFGTPLAHTNALLGEKK 379 I +ML +AGV+DTG L+ A SE +VK LLQQ + D YVN + G T V SI G L SP +V+RL +DAGADT S VR + G+ GTPLA+T LL +++ Sbjct: 367 IVVMLADAGVIDTGRVLIDATKFGSEASVKILLQQQRWKHM--DWNTYVNKKHPDGRTPVVCSI------GRALLSGSP-RVLRLFLDAGADTASTVRIANKEGVEVFSGTPLAYTTWLLRDQQ 481
BLAST of mRNA_L-elsbetiae_contig13251.2528.1 vs. uniprot
Match: D7G1Y3_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Y3_ECTSI) HSP 1 Score: 67.4 bits (163), Expect = 1.200e-9 Identity = 48/87 (55.17%), Postives = 52/87 (59.77%), Query Frame = 1 Query: 376 EIRGLDATEEQLNTLEAIRRLLLRVEAAHAVSWLWSSSHVSSVAKAAGVTTKTATTTPASSTQLALMLPILRRR--RRGALLEPLLR 630 E G D EEQL LEA+RRLLLRVEA HA SW+W SS SVA+ A A T P T+L L ILRRR RRG LL L R Sbjct: 288 ETEGKDDKEEQLGRLEAVRRLLLRVEAVHATSWVWPSSAAGSVAQDAAEVKAGAETEP---TRLTSTLQILRRRATRRGVLLRALSR 371
BLAST of mRNA_L-elsbetiae_contig13251.2528.1 vs. uniprot
Match: A0A6H5JL33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL33_9PHAE) HSP 1 Score: 66.2 bits (160), Expect = 3.100e-9 Identity = 55/127 (43.31%), Postives = 66/127 (51.97%), Query Frame = 2 Query: 17 MLTNAGVVDTGIALVRAAACCSEVAVKCLLQQLEREAFPTDLVRYVNFRDDS-GCTAVFRSINFGAQIGGVRLPPSPTKVVRLLVDAGADTTSAVRAKDIAGIFQNFGTPLAHTNALLGEKKFEG*T 394 +L +AGV+DTG AL+ AA E VK LLQQ + +L YVN D G T + SI+ G + G R P +VVRLLVDAGADT SAV K AG TP+ L E G T Sbjct: 239 VLADAGVMDTGEALITAAGRNDEAGVKLLLQQRHGTSAGGELYMYVNDTHDLVGRTPLLCSIDGG--MAGFRCSP---RVVRLLVDAGADTVSAVPLKGTAGQIGRSVTPIDFATCSLHENMDGGKT 360
BLAST of mRNA_L-elsbetiae_contig13251.2528.1 vs. uniprot
Match: A0A6H5KSA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA9_9PHAE) HSP 1 Score: 65.9 bits (159), Expect = 5.000e-9 Identity = 50/127 (39.37%), Postives = 65/127 (51.18%), Query Frame = 2 Query: 8 ITIMLTNAGVVDTGIALVRAAACCSEVAVKCLLQQLEREAFPTDLVRYVNFRDDSGCTAVFRSINFGAQIGGVRLPPSPTKVVRLLVDAGADTTSAVRAKDIAGIFQNFGTPLAHTNALLGEKKFEG 388 I +ML + G +DTG L+ AA SE VK LLQQ + D YVN + G T V I + G R V+RL +DAGADT S VR + G+ GTPLA+T LL +++ G Sbjct: 395 IVVMLADTGEIDTGRVLIDAAKFGSEALVKILLQQQRGKHMDWDT--YVNKKQPDGRTPVVCRIGRALRSGSPR-------VLRLFLDAGADTASTVRITNKEGVQLFRGTPLAYTTWLLRDQQARG 512
BLAST of mRNA_L-elsbetiae_contig13251.2528.1 vs. uniprot
Match: D8LSC5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC5_ECTSI) HSP 1 Score: 62.4 bits (150), Expect = 2.830e-8 Identity = 49/125 (39.20%), Postives = 67/125 (53.60%), Query Frame = 2 Query: 17 MLTNAGVVDT-GIALVRAAACCSEVAVKCLLQQLEREAFPTDLVRYVNFRDDSGCTAVFRSINFGAQIGGVRLPPSPTKVVRLLVDAGADTTSAVRAKDIAGIFQNFGTPLAHTNALLGEKKFEG 388 +LT AGV D G L+ A E +V+ LL+Q +E+ + Y N D SG T + SI + + ++VRLLVDAGADTTS VR ++ G + TPLA T +LL EK +G Sbjct: 10 ILTGAGVRDAMGYVLLGTAGLGREASVQFLLRQRRKES-EMSVHAYANSSDGSGMTPLSCSIEWCSS--------GNPRIVRLLVDAGADTTSTVRVTNLNGGVEYNDTPLAVTTSLLREKVVDG 125
BLAST of mRNA_L-elsbetiae_contig13251.2528.1 vs. uniprot
Match: D7FY91_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY91_ECTSI) HSP 1 Score: 62.4 bits (150), Expect = 7.040e-8 Identity = 54/131 (41.22%), Postives = 65/131 (49.62%), Query Frame = 2 Query: 2 VGITIMLTNAGVVDTGIALVRAAACCSEVAVKCLLQQLEREAFPTDLVRYVNFRDDSGCTAVFRSINFGAQIGGVRLPPSPTKVVRLLVDAGADTTSAVRAKDIAGIFQNFGTPLAHTNALLGEKKFEG*T 394 VGI ML +AGVVD G AL AAA E +VK LL+Q E + YVN + G T + +I G ++VRLLVDAGADTT+A R G T L LL EKK +G T Sbjct: 234 VGIVAMLAHAGVVDQGSALAAAAAQGYEASVKFLLRQHEGK-HSASRSAYVNKLNRFGLTPLLENITCGH---------CSARIVRLLVDAGADTTAAYRLTGKKGQAMAATTHLTAMGCLLLEKKAKGDT 354
BLAST of mRNA_L-elsbetiae_contig13251.2528.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 61.6 bits (148), Expect = 1.210e-7 Identity = 51/123 (41.46%), Postives = 63/123 (51.22%), Query Frame = 2 Query: 8 ITIMLTNAGVVDTGIALVRAAACCSEVAVKCLLQQLEREAFPTDLVRYVNFRDDSGCTAVFRSINFGAQIGGVRLPPSPTKVVRLLVDAGADTTSAVRAKDIAGIFQNFGTPLAHTNALLGEK 376 I ++LTNAGVVDTG+ALV AA E +K LL+Q R D YVN RD G T + I +VVRLLV+AGADTTS V ++ G TPL T + +K Sbjct: 235 IMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQA-RARKTMDEAAYVNTRDRGGVTPLLWGIQHYRP-----------RVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDK 345
BLAST of mRNA_L-elsbetiae_contig13251.2528.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI) HSP 1 Score: 60.5 bits (145), Expect = 3.000e-7 Identity = 54/127 (42.52%), Postives = 71/127 (55.91%), Query Frame = 2 Query: 14 IMLTNAGVVDTGIALVRAAACCSEVAVKCLLQQLEREAFPTDLVRYVN-FRDDSGCTAVFRSINFGAQIGGVRLPPSPTKVVRLLVDAGADTTSAVRAKDIAGIFQNFG-TPLAHTNALLGEKKFEG 388 ++L GVVDTG AL+ AA VAVK LL++ + +A YVN RD G T V +++ GA G + P K+VRLLVDAGA+TT AV I ++ TPLA T LL E + +G Sbjct: 234 VLLDAGGVVDTGPALILAAENGRAVAVKFLLRRRQADADA-----YVNGTRDPYGRTPVMCAVDVGA--GRLCSP----KIVRLLVDAGANTTRAVGVTRITPRWEKTSETPLAFTTRLLREGRVDG 349 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13251.2528.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13251.2528.1 >prot_L-elsbetiae_contig13251.2528.1 ID=prot_L-elsbetiae_contig13251.2528.1|Name=mRNA_L-elsbetiae_contig13251.2528.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=125bp MLTNAGVVDTGIALVRAAACCSEVAVKCLLQQLEREAFPTDLVRYVNFRDback to top mRNA from alignment at L-elsbetiae_contig13251:651..1280- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13251.2528.1 ID=mRNA_L-elsbetiae_contig13251.2528.1|Name=mRNA_L-elsbetiae_contig13251.2528.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=630bp|location=Sequence derived from alignment at L-elsbetiae_contig13251:651..1280- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13251:651..1280- >mRNA_L-elsbetiae_contig13251.2528.1 ID=mRNA_L-elsbetiae_contig13251.2528.1|Name=mRNA_L-elsbetiae_contig13251.2528.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=750bp|location=Sequence derived from alignment at L-elsbetiae_contig13251:651..1280- (Laminarionema elsbetiae ELsaHSoW15)back to top |