mRNA_L-elsbetiae_contig1324.2521.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1324.2521.1 vs. uniprot
Match: D8LM95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM95_ECTSI) HSP 1 Score: 479 bits (1233), Expect = 2.430e-158 Identity = 285/521 (54.70%), Postives = 348/521 (66.79%), Query Frame = 1 Query: 1 MSFTEMMQQAIQIRTSTDAKLRVDFDSRPKFQQSSMFATQEVQDARRLPLKGRLAVCTAMKLRGNEQMRVSNYGEACEAYEQALAMFWYLENRNSSWKTSGIKDEDITEVNFHPACGVKALEDETGRDLKVALLLNIARAYSARSDYATSVKACDAALASNPSCAKALYLRGKALVTPASAGAFETEGALRDVSRAAELAPGDSLIRGFLAKLRAEKARQKEADRATFAGMFGRGSVCDPEAETSKTRRLHAPTHGDGKAERGVRRSPGVETGSEAPNSNDXXXXXXXDASXXXXXXXXXXXXXXXXADERRAREMRRDVEKKVELLKGMVREFDEEGRDEEADQYRERLAAIEEILSEHDRQEQERVAGLRKSRAEADWRNPSEAMLERAEEEEYDLGDPAVVSFLVKMQEGHRAKV--EAPGKEAEERDDWTAEIWKGAILCMTRPEVTALLKEDLGFDPRP-DTSLRELRNLAVCKLLGEQPS----AERTGNASSTKGDEGPERKRADWKISAAISF 1542 MSFTEMMQQAI IRTSTDA LRVDFD+RPKFQQ+SMFAT++V AR LPL+ R+ CT++KL GNE+MR +AC+ YEQALAMFWYL+N N +WKTS IKDEDI EVNF G +E RDL VALLLNIARAYSA++DY TS +AC AAL NP AKALYLRGKALV PASAGAFET+ A+RDVSRAA+LAP DSLI+ F+AKL+ EKA+QKE DRATFAGMFGRG++CDP E +R LHAPTHG+ V GS+A D S + E RR VE++VE LK M R+ DEEG +EEA+QYRER AAIEE+LS E DWRNPSEAML+RA EEEYDL +PAVVSFLVKMQE HR K+ + ++ +++D+W++ +W+GAILCM+R EVT+ L ++LG D RP DT L LR LA ++LG +PS A G ++G +R W+ A ++ Sbjct: 1 MSFTEMMQQAISIRTSTDANLRVDFDARPKFQQASMFATKKVLAARDLPLEERVGECTSLKLEGNEEMRNGCPDKACQLYEQALAMFWYLKNHNINWKTSEIKDEDIEEVNFWLGRGSDKSTEEI-RDLNVALLLNIARAYSAQNDYTTSARACSAALTLNPCSAKALYLRGKALVAPASAGAFETDAAIRDVSRAAKLAPSDSLIKAFMAKLKTEKAKQKETDRATFAGMFGRGNICDPGGEAEASR-LHAPTHGN------------VSAGSDALRGKPDRAAGKHDLSMEHGQADAGNATRSAGGGD--PLETRRHVEERVEYLKDMARKCDEEGLEEEAEQYRERFAAIEELLSXXXXXXXXXXXXXXXXXXEMDWRNPSEAMLKRAREEEYDLSNPAVVSFLVKMQEMHRRKLTTQQGPEDDDDQDNWSSNVWEGAILCMSRAEVTSFLTKELGVDARPADTPLETLRLLAASRVLG-RPSLGEGASSPGRQKPAANEKGSKRTVWPWQRGKAKAY 504
BLAST of mRNA_L-elsbetiae_contig1324.2521.1 vs. uniprot
Match: A0A485L1P3_9STRA (Aste57867_14707 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L1P3_9STRA) HSP 1 Score: 145 bits (365), Expect = 3.610e-33 Identity = 94/255 (36.86%), Postives = 144/255 (56.47%), Query Frame = 1 Query: 7 FTEMMQQAIQIRTSTDAKLRVDFDSRPKFQQSSMFATQEVQDARRLPLKGRLAVCTAMKLRGNEQMRVSNYGEACEAYEQALAMFWYLENRNSSWKTSGIKDEDI--TEVNFHPACGVKALEDETGRDLKVALLLNIARAYSARS--------------DYATSVKACDAALASNPSCAKALYLRGKALVTPASAGAFETEGALRDVSRAAELAPGDSLIRGFLAKLRAEKARQKEADRATFAGMFGRGSVCDPE 723 F +M +A++++ + A LR +DS P++ Q SMF + + AR P + R+ + + +K+ GN+ N+ EA YE+ALA+F Y EN + WK GI+D+DI + A G AL+ LKV+L LNI+ A S ++A ++ AC AL +P+ AKA Y R +AL+TP S+GA E E AL D+ +A + P + + +LR E+ +Q++ D+ATF+GMF RGSV D E Sbjct: 8 FGNLMAEAVKLKGAQQATLRPIWDSWPQYFQHSMFMQEPILAAREKPFEERMQLASEIKVEGNKHFSDKNFEEAVAQYEKALAIFKYCENSDPEWKKKGIRDDDIHVVDAKADDAAGQHALDA-----LKVSLYLNISGASWKISFVHGPVTVSKIKIKEFALAIAACSDALEIDPTNAKAFYRRAQALITPMSSGAVEFEKALVDLEQACQHDPDNVECKKLYRRLREEQVKQRKLDKATFSGMFTRGSVVDDE 257
BLAST of mRNA_L-elsbetiae_contig1324.2521.1 vs. uniprot
Match: A0A1W0A6P0_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6P0_9STRA) HSP 1 Score: 142 bits (359), Expect = 1.750e-32 Identity = 86/239 (35.98%), Postives = 136/239 (56.90%), Query Frame = 1 Query: 7 FTEMMQQAIQIRTSTDAKLRVDFDSRPKFQQSSMFATQEVQDARRLPLKGRLAVCTAMKLRGNEQMRVSNYGEACEAYEQALAMFWYLENRNSSWKTSGIKDEDITEVNFHPACGVKALEDETGRDLKVALLLNIARAYSARSDYATSVKACDAALASNPSCAKALYLRGKALVTPASAGAFETEGALRDVSRAAELAPGDSLIRGFLAKLRAEKARQKEADRATFAGMFGRGSVCDPE 723 F +M +A++++ + A+LR +DS P++ Q SMF T+ + R R+ +K +GN+ Y EA YE ALA+F Y EN + WK GI D+DI ++ P A + T L V+L LNI+ +++ ++ AC+ A+ +P+C+KA + R +AL+TP S+GA E E AL D+ A + P + IR +LR E+ +Q++ D+ATF+GMF RGS+ E Sbjct: 8 FGNLMAEAVKLKGAQQAQLRPLWDSWPQYFQHSMFMTEPIVSFREKSFDERIEAANEIKTKGNDFFMEKQYEEAVGQYEMALAIFKYCENTDPGWKKKGIHDDDIKVIHTTPDNEQDAKQLTT---LMVSLYLNISVCKMRLNEFPIAIAACNDAIKIDPTCSKAYFRRSQALITPLSSGATEFENALHDLEFALKYDPDNLEIRKLYRRLREEEIKQRKLDKATFSGMFDRGSIVPNE 243
BLAST of mRNA_L-elsbetiae_contig1324.2521.1 vs. uniprot
Match: L1JV40_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JV40_GUITC) HSP 1 Score: 133 bits (335), Expect = 3.310e-30 Identity = 88/242 (36.36%), Postives = 140/242 (57.85%), Query Frame = 1 Query: 7 FTEMMQQAIQIRTSTDAKLRVDFDSRPKFQQSSMFATQEVQDARRLPLKGRLAVCTAMKLRGNEQMRVSNYGEACEAYEQALAMFWYLE--NRNSSWKTSG--IKDEDITEVNFHPACGVKALEDETGRDL---KVALLLNIARAYSARSDYATSVKACDAALASNPSCAKALYLRGKALVTPASAGAFETEGALRDVSRAAELAPGDSLIRGFLAKLRAEKARQKEADRATFAGMFGRGSV 711 F +MQQA+ ++T R +D P F QSS++ ++++D R LP +GRL +MK GN + + A YE++L++F YLE + WKT+G ++DE V+ GV + ++E + K + LNIA ++++ V+ACDAAL +P KA Y R A +TPAS+GA E + AL+D+ +A E+ P + ++ L +LR + A+QK D+ATF+GMF RG++ Sbjct: 3 FGRLMQQAVAMKTEMMKSDRRKYDRLPSFLQSSIYHMEKLKDTRSLPFQGRLEAAESMKEEGNLLFKEEKFDMANIKYEESLSVFKYLEVLEGHEDWKTNGKGLRDEIYRIVDED---GVSSGQEEMIEAISRHKQSCYLNIAACAMKQNNWQNCVRACDAALELDPQSVKAFYRRALARITPASSGAHEQDLALQDLEQAYEIDPTNVKVKAKLLELRKQIAKQKHNDKATFSGMFDRGTI 241
BLAST of mRNA_L-elsbetiae_contig1324.2521.1 vs. uniprot
Match: A0A835ZDQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDQ4_9STRA) HSP 1 Score: 134 bits (337), Expect = 1.660e-29 Identity = 148/553 (26.76%), Postives = 236/553 (42.68%), Query Frame = 1 Query: 4 SFTEMMQQAIQIRTSTDAKLRVDFDSRPKFQQSSMFATQEVQDARRLPLKGRLAVCTAMKLRGNEQMRVSNYGEACEAYEQALAMFWYLENRNSSWKTSGIKDEDITEVN---------------FHPACGVKALEDETGRDLKVALLLNIARAYSARSDYATSVKACDAALASNPSCAKALYLRGKALVTPASAGAFETEGALRDVSRAAELAPGDSLIRGFLAKLRAEKARQKEADRATFAGMFGRGSVCDPEAETSKTRRLHAPTHGDGKAERGVRRSPGVETGSEAPNSNDXXXXXXXDASXXXXXXXXXXXXXXXXADERRAREMRRDVEKKVELLKGMVREFDEEGRDEEADQYRERLAAIEEILSEHDRQEQERVAGLRKSRAEA-----DWRNPSEAMLERAEEEEYDLGDPAVVSFLVKMQEGHRAK---VEAPGKEAEERDDWTAEIWKGAILCMTRPEVTALLKEDLGFDPRPDTSLRELRNLAVCKLLGEQPSAERTGNASSTKGDEGPERKRAD-----WKISAAISFLLFLFKAYQMGL 1578 SF ++Q+A+++RTSTDA LR FD P F QS++FA V R+LP++ RL A+K GN ++ + EA +YEQAL+ Y+ NR++ W GI+DED+T V+ P V ++ VA LNIA AY R +A +V AC A+ ++P+ AKA + R +A + A AGA + A+ D++RAA L +A + +R F+G+FG G V AE R+ A G G G+ T RRD++ +E L+ + E EG +++A E L + +L++ ++ + DWRN + M+ A+E DL + AVV ++++++ G +AP + + TA +L + RP+ +L ++ R + R R L + +G A T+ P RA WK+SAA L++ Y++GL Sbjct: 6 SFHNIIQEAVKLRTSTDAPLRSWFDGLPVFLQSTLFAPDAVLAIRQLPMQERLKAAAALKDVGNVHLKEQRHEEAASSYEQALSCVVYVSNRHADWTKRGIRDEDLTLVDCDGDPEHADDLRRVALSPDATVVHTYLPAATEVVVACYLNIALAYGRRGRHAAAVAACTRAIHTHPTSAKAHFRRAQARLASAGAGAHALDLAVADLARAAALGXXXXXXXXXXXXXX-XRAALRRRERGAFSGLFGWGEVVVGTAE-----RVGAKDAG-GAXXXXXXXXXGIRT--------------------------------------------RRDLQGAIEQLEKELEEATREGAEDKAAVIAETLDNMRGVLAQAVAEQXXXXXXRAPNHGSVGQQRPDWRNATPEMIADAKEHGIDLTNAAVVDYILQLERGEDVPDDTCDAPPAKVQ----LTAPNNASEVLTLRRPK--SLTRQCAA---RRSSLTRAARWLRFSRNAQGSSGGGSSGAAHGTQVAWPPIPARASQQAHSWKLSAAFVAASVLWRLYRLGL 498
BLAST of mRNA_L-elsbetiae_contig1324.2521.1 vs. uniprot
Match: A0A7S1AJS7_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AJS7_NOCSC) HSP 1 Score: 117 bits (292), Expect = 6.840e-24 Identity = 111/451 (24.61%), Postives = 207/451 (45.90%), Query Frame = 1 Query: 16 MMQQAIQIRTSTDAKLRVDFDSRPKFQQSSMFATQ--EVQDARRLPLKGRLAVCTAMKLRGNEQMRVSNYGEACEAYEQALAMFWYLENRNSSWKTS--GIKDEDITEVNFHPACGVKALEDETGRDLKVALLLNIARAYSARSDYATSVKACDAALASNPSCAKALYLRGKALVTPASAGAFETEGALRDVSRAAELAPGDSLIRGFLAKLRAEKARQKEADRATFAGMFGRGSVCDPEAETSKTRRLHAPTHGDGKAERGVRRSPGVETGSEAPNSNDXXXXXXXDASXXXXXXXXXXXXXXXXADERRAREMRRDVEKKVELLKGMVREFDEEGRDEEADQYRERLAAIEEILSEHDRQEQERVAGLRKSRAEADWRNPSEAMLERAEEEEYDLGDPAVVSFLVKMQEGHRAKVEA----PGKEAEERDDWTA---EIWKGAILCMTR 1335 ++Q+A++++++ + R +++ P F Q ++F + E + R+LP R+ V +K GN+ + +N+ +A YE+A ++F+Y ++++ W+ + GI D+++ V+ G E E L+VA LN+A +P KALY R KA + P + A++T+ A++D+++A L P D+ IR LA+LR E++ Q+ DR TF GMF RG + D K + P+ G+ E+G + D DA E+ RD + G++++A + ER+ ++ L + D++++++ GL DW NP+ M++ A++ DL +P V + L++++ E PG+ ++W EI GA + +R Sbjct: 39 ILQEAVKLKSAQIGQKRKTYETWPYFVQHTLFHGEKDEFKAWRKLPFDERMEVAERLKAEGNDLFKQNNFMDAINKYEEAPSVFYYCYSKDAGWRKNNKGIDDDELVLVDD---TGQIPEEVEKVNQLRVACCLNLAAXXXXXXXXXXXXXXXXXXXXXDPKNIKALYRRAKARIQPTGSTAYDTDCAIKDLTKATALDPNDTTIREMLARLRVERSEQRAKDRDTFTGMFERGEIYD------KLKPRLIPSEGEVAEEKGEGXXXXXD------GEEDSLEKRIADA------------------------ELLRDA-------------YMSNGKEDQAKELNERIQQSKKYLKDRDKKQEQQERGLTGH----DWSNPTPEMIDDAKKSGIDLNNPEVRAELMRLEREGLPSDEGDGSQPGQGQVVEEEWPTLPPEIKDGAPVPWSR 433
BLAST of mRNA_L-elsbetiae_contig1324.2521.1 vs. uniprot
Match: K0RHA0_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RHA0_THAOC) HSP 1 Score: 112 bits (279), Expect = 2.000e-22 Identity = 81/238 (34.03%), Postives = 123/238 (51.68%), Query Frame = 1 Query: 16 MMQQAIQIRTSTDAKLRVDFDSRPKFQQSSMFATQ-EVQDARRLPLKGRLAVCTAMKLRGNEQMRVSNYGEACEAYEQALAMFWYLENRNSSWKTSGIKDEDITEVNFHPACGVKALEDETGRDLKVALLLNIARAYSARSDYATSVKACDAALASNPSC-----AKALYLRGKALVTPASAGAFETEGALRDVSRAAELAPGDSLIRGFLAKLRAEKARQKEADRATFAGMFGRGSV 711 M+++A +++ + R FDS P QS+++ V++ARR P +LAV A+K GN +G+A + YEQAL++F YLEN+N+SW+TSGIKDEDI E CG + + V N A A + +++A ++A+ AKALYLR KA + + G E A D+ + E P ++ + LA+L Q + D+ TF G+F RG V Sbjct: 22 MIERAAKLKMLQSSGERRRFDSFPATLQSTLYDDDVRVENARRAPFLDKLAVARAIKDDGNSSFGQQRFGDALKLYEQALSIFHYLENKNTSWRTSGIKDEDIVERRHD--CGNDEDQKAQLSEFMVVCYNNCALAALKLGRHQHALQAAESAVEMTAGVVSSRSAKALYLRAKARLEDKTCGHEEQSLARSDLLASIECDPDNNAAKKMLAQLNKRSRAQTKQDKETFGGLFDRGEV 257
BLAST of mRNA_L-elsbetiae_contig1324.2521.1 vs. uniprot
Match: C1N8R9_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N8R9_MICPC) HSP 1 Score: 72.0 bits (175), Expect = 1.640e-9 Identity = 71/247 (28.74%), Postives = 115/247 (46.56%), Query Frame = 1 Query: 4 SFTEMMQQAIQIRTSTDAKLRVDFDSRPKFQQSSMFATQE---VQDARRLPLKGRLAVCTAMKLRGNEQMRVSNYGEACEAYEQALAMF--WYLENRNSSWKTSGIKDEDITEVNFHPACGVKALEDETGRDLKVALLLNIARAYSARSDYATS-----------VKACDAALASNPSCAKALYLRGKALVTPASAGAFETEGALRDVSRAAELAPGDSLIRGFLAKLRAEKARQKEADRATFAGMF 696 SF +++Q+A +++T+ R ++++ P F +++M ++ V + ++ ++ T K RGNE Y +A Y +A+A+F W E + KD++ T D R ++LLN A A A+ D A V C L + +C KA Y R AL + S+ A E A++D++RAA LAP D+L+R L K R+E Q DR T+ G F Sbjct: 33 SFNDILQKAAEMKTAQLKDKRREWEASPDFMKNTMAYDKDDTLVALRKDGTVREKIDHATPAKARGNELYAEGLYEDAMSEYTKAIAVFRYWNRETVGNEQNLVCFKDDETTTPT-----------DPAARAFVSSVLLN-ASACMAKIDAARDPDTPPTHVDGIVWTCTEVLNIDDACVKAYYRRAIALASAGSSVALEK--AVKDLARAARLAPSDALVRDALRKHRSEYDAQCAKDRKTYGGAF 265
BLAST of mRNA_L-elsbetiae_contig1324.2521.1 vs. uniprot
Match: A0A7S2UXQ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXQ6_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 5.300e-9 Identity = 46/143 (32.17%), Postives = 72/143 (50.35%), Query Frame = 1 Query: 7 FTEMMQQAIQIRTSTDAKLRVDFDSRPKFQQSSMFATQEVQDARRLPLKGRLAVCTAMKLRGNEQMRVSN------------YGEACEA---YEQALAMFWYLENRNSSWKTSGIKDEDITEVNFHPACGVKALEDETGRDLK 390 F+E+M QA++++T++ A LR FD PK+ Q+SMFAT E+ R P RL K + + + +G+ +A YE ALA+F +LEN WK GI DE + +H G + E++ + L+ Sbjct: 20 FSEVMNQAVKLKTASHAPLRSRFDGYPKWLQNSMFATDEMLADREKPFAERLKAAWDRKDKADALLLEVEGKPVPLGAPGGVHGQTLDAQNTYEAALAVFEWLENTQPGWKKKGIYDEHL---EYHKFSGDSSAEEDQVKALQ 159
BLAST of mRNA_L-elsbetiae_contig1324.2521.1 vs. uniprot
Match: A0A7R9U5M5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5M5_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 9.950e-9 Identity = 36/89 (40.45%), Postives = 49/89 (55.06%), Query Frame = 1 Query: 73 FDSRPKFQQSSMFATQEVQDARRLPLKGRLAVCTAMKLRGNEQMRVSNYGEACEA-YEQALAMFWYLENRNSSWKTSGIKDEDITEVNF 336 +D P+F Q+SMF + E+QD R RL V T +K GNE R + C YE ALA+F Y+EN WK + I D+D+ +F Sbjct: 3 YDGLPRFAQNSMFGSSELQDKRSGTFAERLEVATRLKEEGNELFRSAGGPLECAMKYENALAIFRYIENTRPDWKKNCIDDDDMIYHDF 91 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1324.2521.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1324.2521.1 >prot_L-elsbetiae_contig1324.2521.1 ID=prot_L-elsbetiae_contig1324.2521.1|Name=mRNA_L-elsbetiae_contig1324.2521.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=679bp MSFTEMMQQAIQIRTSTDAKLRVDFDSRPKFQQSSMFATQEVQDARRLPLback to top mRNA from alignment at L-elsbetiae_contig1324:13648..24820+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1324.2521.1 ID=mRNA_L-elsbetiae_contig1324.2521.1|Name=mRNA_L-elsbetiae_contig1324.2521.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=11173bp|location=Sequence derived from alignment at L-elsbetiae_contig1324:13648..24820+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1324:13648..24820+ >mRNA_L-elsbetiae_contig1324.2521.1 ID=mRNA_L-elsbetiae_contig1324.2521.1|Name=mRNA_L-elsbetiae_contig1324.2521.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4074bp|location=Sequence derived from alignment at L-elsbetiae_contig1324:13648..24820+ (Laminarionema elsbetiae ELsaHSoW15)back to top |