mRNA_L-elsbetiae_contig1324.2521.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1324.2521.1
Unique NamemRNA_L-elsbetiae_contig1324.2521.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1324.2521.1 vs. uniprot
Match: D8LM95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM95_ECTSI)

HSP 1 Score: 479 bits (1233), Expect = 2.430e-158
Identity = 285/521 (54.70%), Postives = 348/521 (66.79%), Query Frame = 1
Query:    1 MSFTEMMQQAIQIRTSTDAKLRVDFDSRPKFQQSSMFATQEVQDARRLPLKGRLAVCTAMKLRGNEQMRVSNYGEACEAYEQALAMFWYLENRNSSWKTSGIKDEDITEVNFHPACGVKALEDETGRDLKVALLLNIARAYSARSDYATSVKACDAALASNPSCAKALYLRGKALVTPASAGAFETEGALRDVSRAAELAPGDSLIRGFLAKLRAEKARQKEADRATFAGMFGRGSVCDPEAETSKTRRLHAPTHGDGKAERGVRRSPGVETGSEAPNSNDXXXXXXXDASXXXXXXXXXXXXXXXXADERRAREMRRDVEKKVELLKGMVREFDEEGRDEEADQYRERLAAIEEILSEHDRQEQERVAGLRKSRAEADWRNPSEAMLERAEEEEYDLGDPAVVSFLVKMQEGHRAKV--EAPGKEAEERDDWTAEIWKGAILCMTRPEVTALLKEDLGFDPRP-DTSLRELRNLAVCKLLGEQPS----AERTGNASSTKGDEGPERKRADWKISAAISF 1542
            MSFTEMMQQAI IRTSTDA LRVDFD+RPKFQQ+SMFAT++V  AR LPL+ R+  CT++KL GNE+MR     +AC+ YEQALAMFWYL+N N +WKTS IKDEDI EVNF    G     +E  RDL VALLLNIARAYSA++DY TS +AC AAL  NP  AKALYLRGKALV PASAGAFET+ A+RDVSRAA+LAP DSLI+ F+AKL+ EKA+QKE DRATFAGMFGRG++CDP  E   +R LHAPTHG+            V  GS+A            D S                  +    E RR VE++VE LK M R+ DEEG +EEA+QYRER AAIEE+LS                  E DWRNPSEAML+RA EEEYDL +PAVVSFLVKMQE HR K+  +   ++ +++D+W++ +W+GAILCM+R EVT+ L ++LG D RP DT L  LR LA  ++LG +PS    A   G       ++G +R    W+   A ++
Sbjct:    1 MSFTEMMQQAISIRTSTDANLRVDFDARPKFQQASMFATKKVLAARDLPLEERVGECTSLKLEGNEEMRNGCPDKACQLYEQALAMFWYLKNHNINWKTSEIKDEDIEEVNFWLGRGSDKSTEEI-RDLNVALLLNIARAYSAQNDYTTSARACSAALTLNPCSAKALYLRGKALVAPASAGAFETDAAIRDVSRAAKLAPSDSLIKAFMAKLKTEKAKQKETDRATFAGMFGRGNICDPGGEAEASR-LHAPTHGN------------VSAGSDALRGKPDRAAGKHDLSMEHGQADAGNATRSAGGGD--PLETRRHVEERVEYLKDMARKCDEEGLEEEAEQYRERFAAIEELLSXXXXXXXXXXXXXXXXXXEMDWRNPSEAMLKRAREEEYDLSNPAVVSFLVKMQEMHRRKLTTQQGPEDDDDQDNWSSNVWEGAILCMSRAEVTSFLTKELGVDARPADTPLETLRLLAASRVLG-RPSLGEGASSPGRQKPAANEKGSKRTVWPWQRGKAKAY 504          
BLAST of mRNA_L-elsbetiae_contig1324.2521.1 vs. uniprot
Match: A0A485L1P3_9STRA (Aste57867_14707 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L1P3_9STRA)

HSP 1 Score: 145 bits (365), Expect = 3.610e-33
Identity = 94/255 (36.86%), Postives = 144/255 (56.47%), Query Frame = 1
Query:    7 FTEMMQQAIQIRTSTDAKLRVDFDSRPKFQQSSMFATQEVQDARRLPLKGRLAVCTAMKLRGNEQMRVSNYGEACEAYEQALAMFWYLENRNSSWKTSGIKDEDI--TEVNFHPACGVKALEDETGRDLKVALLLNIARAYSARS--------------DYATSVKACDAALASNPSCAKALYLRGKALVTPASAGAFETEGALRDVSRAAELAPGDSLIRGFLAKLRAEKARQKEADRATFAGMFGRGSVCDPE 723
            F  +M +A++++ +  A LR  +DS P++ Q SMF  + +  AR  P + R+ + + +K+ GN+     N+ EA   YE+ALA+F Y EN +  WK  GI+D+DI   +     A G  AL+      LKV+L LNI+ A    S              ++A ++ AC  AL  +P+ AKA Y R +AL+TP S+GA E E AL D+ +A +  P +   +    +LR E+ +Q++ D+ATF+GMF RGSV D E
Sbjct:    8 FGNLMAEAVKLKGAQQATLRPIWDSWPQYFQHSMFMQEPILAAREKPFEERMQLASEIKVEGNKHFSDKNFEEAVAQYEKALAIFKYCENSDPEWKKKGIRDDDIHVVDAKADDAAGQHALDA-----LKVSLYLNISGASWKISFVHGPVTVSKIKIKEFALAIAACSDALEIDPTNAKAFYRRAQALITPMSSGAVEFEKALVDLEQACQHDPDNVECKKLYRRLREEQVKQRKLDKATFSGMFTRGSVVDDE 257          
BLAST of mRNA_L-elsbetiae_contig1324.2521.1 vs. uniprot
Match: A0A1W0A6P0_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6P0_9STRA)

HSP 1 Score: 142 bits (359), Expect = 1.750e-32
Identity = 86/239 (35.98%), Postives = 136/239 (56.90%), Query Frame = 1
Query:    7 FTEMMQQAIQIRTSTDAKLRVDFDSRPKFQQSSMFATQEVQDARRLPLKGRLAVCTAMKLRGNEQMRVSNYGEACEAYEQALAMFWYLENRNSSWKTSGIKDEDITEVNFHPACGVKALEDETGRDLKVALLLNIARAYSARSDYATSVKACDAALASNPSCAKALYLRGKALVTPASAGAFETEGALRDVSRAAELAPGDSLIRGFLAKLRAEKARQKEADRATFAGMFGRGSVCDPE 723
            F  +M +A++++ +  A+LR  +DS P++ Q SMF T+ +   R      R+     +K +GN+      Y EA   YE ALA+F Y EN +  WK  GI D+DI  ++  P     A +  T   L V+L LNI+      +++  ++ AC+ A+  +P+C+KA + R +AL+TP S+GA E E AL D+  A +  P +  IR    +LR E+ +Q++ D+ATF+GMF RGS+   E
Sbjct:    8 FGNLMAEAVKLKGAQQAQLRPLWDSWPQYFQHSMFMTEPIVSFREKSFDERIEAANEIKTKGNDFFMEKQYEEAVGQYEMALAIFKYCENTDPGWKKKGIHDDDIKVIHTTPDNEQDAKQLTT---LMVSLYLNISVCKMRLNEFPIAIAACNDAIKIDPTCSKAYFRRSQALITPLSSGATEFENALHDLEFALKYDPDNLEIRKLYRRLREEEIKQRKLDKATFSGMFDRGSIVPNE 243          
BLAST of mRNA_L-elsbetiae_contig1324.2521.1 vs. uniprot
Match: L1JV40_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JV40_GUITC)

HSP 1 Score: 133 bits (335), Expect = 3.310e-30
Identity = 88/242 (36.36%), Postives = 140/242 (57.85%), Query Frame = 1
Query:    7 FTEMMQQAIQIRTSTDAKLRVDFDSRPKFQQSSMFATQEVQDARRLPLKGRLAVCTAMKLRGNEQMRVSNYGEACEAYEQALAMFWYLE--NRNSSWKTSG--IKDEDITEVNFHPACGVKALEDETGRDL---KVALLLNIARAYSARSDYATSVKACDAALASNPSCAKALYLRGKALVTPASAGAFETEGALRDVSRAAELAPGDSLIRGFLAKLRAEKARQKEADRATFAGMFGRGSV 711
            F  +MQQA+ ++T      R  +D  P F QSS++  ++++D R LP +GRL    +MK  GN   +   +  A   YE++L++F YLE    +  WKT+G  ++DE    V+     GV + ++E    +   K +  LNIA     ++++   V+ACDAAL  +P   KA Y R  A +TPAS+GA E + AL+D+ +A E+ P +  ++  L +LR + A+QK  D+ATF+GMF RG++
Sbjct:    3 FGRLMQQAVAMKTEMMKSDRRKYDRLPSFLQSSIYHMEKLKDTRSLPFQGRLEAAESMKEEGNLLFKEEKFDMANIKYEESLSVFKYLEVLEGHEDWKTNGKGLRDEIYRIVDED---GVSSGQEEMIEAISRHKQSCYLNIAACAMKQNNWQNCVRACDAALELDPQSVKAFYRRALARITPASSGAHEQDLALQDLEQAYEIDPTNVKVKAKLLELRKQIAKQKHNDKATFSGMFDRGTI 241          
BLAST of mRNA_L-elsbetiae_contig1324.2521.1 vs. uniprot
Match: A0A835ZDQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDQ4_9STRA)

HSP 1 Score: 134 bits (337), Expect = 1.660e-29
Identity = 148/553 (26.76%), Postives = 236/553 (42.68%), Query Frame = 1
Query:    4 SFTEMMQQAIQIRTSTDAKLRVDFDSRPKFQQSSMFATQEVQDARRLPLKGRLAVCTAMKLRGNEQMRVSNYGEACEAYEQALAMFWYLENRNSSWKTSGIKDEDITEVN---------------FHPACGVKALEDETGRDLKVALLLNIARAYSARSDYATSVKACDAALASNPSCAKALYLRGKALVTPASAGAFETEGALRDVSRAAELAPGDSLIRGFLAKLRAEKARQKEADRATFAGMFGRGSVCDPEAETSKTRRLHAPTHGDGKAERGVRRSPGVETGSEAPNSNDXXXXXXXDASXXXXXXXXXXXXXXXXADERRAREMRRDVEKKVELLKGMVREFDEEGRDEEADQYRERLAAIEEILSEHDRQEQERVAGLRKSRAEA-----DWRNPSEAMLERAEEEEYDLGDPAVVSFLVKMQEGHRAK---VEAPGKEAEERDDWTAEIWKGAILCMTRPEVTALLKEDLGFDPRPDTSLRELRNLAVCKLLGEQPSAERTGNASSTKGDEGPERKRAD-----WKISAAISFLLFLFKAYQMGL 1578
            SF  ++Q+A+++RTSTDA LR  FD  P F QS++FA   V   R+LP++ RL    A+K  GN  ++   + EA  +YEQAL+   Y+ NR++ W   GI+DED+T V+                 P   V         ++ VA  LNIA AY  R  +A +V AC  A+ ++P+ AKA + R +A +  A AGA   + A+ D++RAA L                 +A  +  +R  F+G+FG G V    AE     R+ A   G G          G+ T                                            RRD++  +E L+  + E   EG +++A    E L  +  +L++   ++         +         DWRN +  M+  A+E   DL + AVV ++++++ G        +AP  + +     TA      +L + RP+  +L ++      R  +  R  R L   +          +G A  T+    P   RA      WK+SAA      L++ Y++GL
Sbjct:    6 SFHNIIQEAVKLRTSTDAPLRSWFDGLPVFLQSTLFAPDAVLAIRQLPMQERLKAAAALKDVGNVHLKEQRHEEAASSYEQALSCVVYVSNRHADWTKRGIRDEDLTLVDCDGDPEHADDLRRVALSPDATVVHTYLPAATEVVVACYLNIALAYGRRGRHAAAVAACTRAIHTHPTSAKAHFRRAQARLASAGAGAHALDLAVADLARAAALGXXXXXXXXXXXXXX-XRAALRRRERGAFSGLFGWGEVVVGTAE-----RVGAKDAG-GAXXXXXXXXXGIRT--------------------------------------------RRDLQGAIEQLEKELEEATREGAEDKAAVIAETLDNMRGVLAQAVAEQXXXXXXRAPNHGSVGQQRPDWRNATPEMIADAKEHGIDLTNAAVVDYILQLERGEDVPDDTCDAPPAKVQ----LTAPNNASEVLTLRRPK--SLTRQCAA---RRSSLTRAARWLRFSRNAQGSSGGGSSGAAHGTQVAWPPIPARASQQAHSWKLSAAFVAASVLWRLYRLGL 498          
BLAST of mRNA_L-elsbetiae_contig1324.2521.1 vs. uniprot
Match: A0A7S1AJS7_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AJS7_NOCSC)

HSP 1 Score: 117 bits (292), Expect = 6.840e-24
Identity = 111/451 (24.61%), Postives = 207/451 (45.90%), Query Frame = 1
Query:   16 MMQQAIQIRTSTDAKLRVDFDSRPKFQQSSMFATQ--EVQDARRLPLKGRLAVCTAMKLRGNEQMRVSNYGEACEAYEQALAMFWYLENRNSSWKTS--GIKDEDITEVNFHPACGVKALEDETGRDLKVALLLNIARAYSARSDYATSVKACDAALASNPSCAKALYLRGKALVTPASAGAFETEGALRDVSRAAELAPGDSLIRGFLAKLRAEKARQKEADRATFAGMFGRGSVCDPEAETSKTRRLHAPTHGDGKAERGVRRSPGVETGSEAPNSNDXXXXXXXDASXXXXXXXXXXXXXXXXADERRAREMRRDVEKKVELLKGMVREFDEEGRDEEADQYRERLAAIEEILSEHDRQEQERVAGLRKSRAEADWRNPSEAMLERAEEEEYDLGDPAVVSFLVKMQEGHRAKVEA----PGKEAEERDDWTA---EIWKGAILCMTR 1335
            ++Q+A++++++   + R  +++ P F Q ++F  +  E +  R+LP   R+ V   +K  GN+  + +N+ +A   YE+A ++F+Y  ++++ W+ +  GI D+++  V+     G    E E    L+VA  LN+A                      +P   KALY R KA + P  + A++T+ A++D+++A  L P D+ IR  LA+LR E++ Q+  DR TF GMF RG + D      K +    P+ G+   E+G       +         D       DA                        E+ RD              +   G++++A +  ER+   ++ L + D++++++  GL       DW NP+  M++ A++   DL +P V + L++++       E     PG+     ++W     EI  GA +  +R
Sbjct:   39 ILQEAVKLKSAQIGQKRKTYETWPYFVQHTLFHGEKDEFKAWRKLPFDERMEVAERLKAEGNDLFKQNNFMDAINKYEEAPSVFYYCYSKDAGWRKNNKGIDDDELVLVDD---TGQIPEEVEKVNQLRVACCLNLAAXXXXXXXXXXXXXXXXXXXXXDPKNIKALYRRAKARIQPTGSTAYDTDCAIKDLTKATALDPNDTTIREMLARLRVERSEQRAKDRDTFTGMFERGEIYD------KLKPRLIPSEGEVAEEKGEGXXXXXD------GEEDSLEKRIADA------------------------ELLRDA-------------YMSNGKEDQAKELNERIQQSKKYLKDRDKKQEQQERGLTGH----DWSNPTPEMIDDAKKSGIDLNNPEVRAELMRLEREGLPSDEGDGSQPGQGQVVEEEWPTLPPEIKDGAPVPWSR 433          
BLAST of mRNA_L-elsbetiae_contig1324.2521.1 vs. uniprot
Match: K0RHA0_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RHA0_THAOC)

HSP 1 Score: 112 bits (279), Expect = 2.000e-22
Identity = 81/238 (34.03%), Postives = 123/238 (51.68%), Query Frame = 1
Query:   16 MMQQAIQIRTSTDAKLRVDFDSRPKFQQSSMFATQ-EVQDARRLPLKGRLAVCTAMKLRGNEQMRVSNYGEACEAYEQALAMFWYLENRNSSWKTSGIKDEDITEVNFHPACGVKALEDETGRDLKVALLLNIARAYSARSDYATSVKACDAALASNPSC-----AKALYLRGKALVTPASAGAFETEGALRDVSRAAELAPGDSLIRGFLAKLRAEKARQKEADRATFAGMFGRGSV 711
            M+++A +++    +  R  FDS P   QS+++     V++ARR P   +LAV  A+K  GN       +G+A + YEQAL++F YLEN+N+SW+TSGIKDEDI E      CG    +     +  V    N A A      +  +++A ++A+           AKALYLR KA +   + G  E   A  D+  + E  P ++  +  LA+L      Q + D+ TF G+F RG V
Sbjct:   22 MIERAAKLKMLQSSGERRRFDSFPATLQSTLYDDDVRVENARRAPFLDKLAVARAIKDDGNSSFGQQRFGDALKLYEQALSIFHYLENKNTSWRTSGIKDEDIVERRHD--CGNDEDQKAQLSEFMVVCYNNCALAALKLGRHQHALQAAESAVEMTAGVVSSRSAKALYLRAKARLEDKTCGHEEQSLARSDLLASIECDPDNNAAKKMLAQLNKRSRAQTKQDKETFGGLFDRGEV 257          
BLAST of mRNA_L-elsbetiae_contig1324.2521.1 vs. uniprot
Match: C1N8R9_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N8R9_MICPC)

HSP 1 Score: 72.0 bits (175), Expect = 1.640e-9
Identity = 71/247 (28.74%), Postives = 115/247 (46.56%), Query Frame = 1
Query:    4 SFTEMMQQAIQIRTSTDAKLRVDFDSRPKFQQSSMFATQE---VQDARRLPLKGRLAVCTAMKLRGNEQMRVSNYGEACEAYEQALAMF--WYLENRNSSWKTSGIKDEDITEVNFHPACGVKALEDETGRDLKVALLLNIARAYSARSDYATS-----------VKACDAALASNPSCAKALYLRGKALVTPASAGAFETEGALRDVSRAAELAPGDSLIRGFLAKLRAEKARQKEADRATFAGMF 696
            SF +++Q+A +++T+     R ++++ P F +++M   ++   V   +   ++ ++   T  K RGNE      Y +A   Y +A+A+F  W  E   +       KD++ T              D   R    ++LLN A A  A+ D A             V  C   L  + +C KA Y R  AL +  S+ A E   A++D++RAA LAP D+L+R  L K R+E   Q   DR T+ G F
Sbjct:   33 SFNDILQKAAEMKTAQLKDKRREWEASPDFMKNTMAYDKDDTLVALRKDGTVREKIDHATPAKARGNELYAEGLYEDAMSEYTKAIAVFRYWNRETVGNEQNLVCFKDDETTTPT-----------DPAARAFVSSVLLN-ASACMAKIDAARDPDTPPTHVDGIVWTCTEVLNIDDACVKAYYRRAIALASAGSSVALEK--AVKDLARAARLAPSDALVRDALRKHRSEYDAQCAKDRKTYGGAF 265          
BLAST of mRNA_L-elsbetiae_contig1324.2521.1 vs. uniprot
Match: A0A7S2UXQ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXQ6_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 5.300e-9
Identity = 46/143 (32.17%), Postives = 72/143 (50.35%), Query Frame = 1
Query:    7 FTEMMQQAIQIRTSTDAKLRVDFDSRPKFQQSSMFATQEVQDARRLPLKGRLAVCTAMKLRGNEQMRVSN------------YGEACEA---YEQALAMFWYLENRNSSWKTSGIKDEDITEVNFHPACGVKALEDETGRDLK 390
            F+E+M QA++++T++ A LR  FD  PK+ Q+SMFAT E+   R  P   RL      K + +  +                +G+  +A   YE ALA+F +LEN    WK  GI DE +    +H   G  + E++  + L+
Sbjct:   20 FSEVMNQAVKLKTASHAPLRSRFDGYPKWLQNSMFATDEMLADREKPFAERLKAAWDRKDKADALLLEVEGKPVPLGAPGGVHGQTLDAQNTYEAALAVFEWLENTQPGWKKKGIYDEHL---EYHKFSGDSSAEEDQVKALQ 159          
BLAST of mRNA_L-elsbetiae_contig1324.2521.1 vs. uniprot
Match: A0A7R9U5M5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5M5_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 9.950e-9
Identity = 36/89 (40.45%), Postives = 49/89 (55.06%), Query Frame = 1
Query:   73 FDSRPKFQQSSMFATQEVQDARRLPLKGRLAVCTAMKLRGNEQMRVSNYGEACEA-YEQALAMFWYLENRNSSWKTSGIKDEDITEVNF 336
            +D  P+F Q+SMF + E+QD R      RL V T +K  GNE  R +     C   YE ALA+F Y+EN    WK + I D+D+   +F
Sbjct:    3 YDGLPRFAQNSMFGSSELQDKRSGTFAERLEVATRLKEEGNELFRSAGGPLECAMKYENALAIFRYIENTRPDWKKNCIDDDDMIYHDF 91          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1324.2521.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LM95_ECTSI2.430e-15854.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A485L1P3_9STRA3.610e-3336.86Aste57867_14707 protein n=1 Tax=Aphanomyces stella... [more]
A0A1W0A6P0_9STRA1.750e-3235.98Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
L1JV40_GUITC3.310e-3036.36Uncharacterized protein (Fragment) n=1 Tax=Guillar... [more]
A0A835ZDQ4_9STRA1.660e-2926.76Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1AJS7_NOCSC6.840e-2424.61Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
K0RHA0_THAOC2.000e-2234.03Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
C1N8R9_MICPC1.640e-928.74Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
A0A7S2UXQ6_9STRA5.300e-932.17Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7R9U5M5_9STRA9.950e-940.45Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1324contigL-elsbetiae_contig1324:13648..24820 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score484.6
Seed ortholog evalue7.7e-134
Seed eggNOG ortholog2880.D8LM95
Hectar predicted targeting categoryother localisation
EggNOG OGs2E1RR@1,2S91S@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionFKBP and TPR domain protein
Ec32 orthologEc-05_001980.1
Exons15
Model size2374
Cds size2037
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1324.2521.1prot_L-elsbetiae_contig1324.2521.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1324 13648..24483 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815502.2285278-CDS-L-elsbetiae_contig1324:13647..136741622815502.2285278-CDS-L-elsbetiae_contig1324:13647..13674Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1324 13648..13674 +
1691682929.386361-CDS-L-elsbetiae_contig1324:13647..136741691682929.386361-CDS-L-elsbetiae_contig1324:13647..13674Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1324 13648..13674 +
1622815502.2455654-CDS-L-elsbetiae_contig1324:14612..147081622815502.2455654-CDS-L-elsbetiae_contig1324:14612..14708Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1324 14613..14708 +
1691682929.3960342-CDS-L-elsbetiae_contig1324:14612..147081691682929.3960342-CDS-L-elsbetiae_contig1324:14612..14708Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1324 14613..14708 +
1622815502.2639647-CDS-L-elsbetiae_contig1324:15268..153911622815502.2639647-CDS-L-elsbetiae_contig1324:15268..15391Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1324 15269..15391 +
1691682929.4066327-CDS-L-elsbetiae_contig1324:15268..153911691682929.4066327-CDS-L-elsbetiae_contig1324:15268..15391Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1324 15269..15391 +
1622815502.2764456-CDS-L-elsbetiae_contig1324:15796..159271622815502.2764456-CDS-L-elsbetiae_contig1324:15796..15927Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1324 15797..15927 +
1691682929.415016-CDS-L-elsbetiae_contig1324:15796..159271691682929.415016-CDS-L-elsbetiae_contig1324:15796..15927Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1324 15797..15927 +
1622815502.2890937-CDS-L-elsbetiae_contig1324:16421..166161622815502.2890937-CDS-L-elsbetiae_contig1324:16421..16616Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1324 16422..16616 +
1691682929.4231577-CDS-L-elsbetiae_contig1324:16421..166161691682929.4231577-CDS-L-elsbetiae_contig1324:16421..16616Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1324 16422..16616 +
1622815502.2998595-CDS-L-elsbetiae_contig1324:17615..177651622815502.2998595-CDS-L-elsbetiae_contig1324:17615..17765Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1324 17616..17765 +
1691682929.4310062-CDS-L-elsbetiae_contig1324:17615..177651691682929.4310062-CDS-L-elsbetiae_contig1324:17615..17765Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1324 17616..17765 +
1622815502.311399-CDS-L-elsbetiae_contig1324:18354..186431622815502.311399-CDS-L-elsbetiae_contig1324:18354..18643Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1324 18355..18643 +
1691682929.4389005-CDS-L-elsbetiae_contig1324:18354..186431691682929.4389005-CDS-L-elsbetiae_contig1324:18354..18643Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1324 18355..18643 +
1622815502.3222091-CDS-L-elsbetiae_contig1324:19172..193281622815502.3222091-CDS-L-elsbetiae_contig1324:19172..19328Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1324 19173..19328 +
1691682929.4467604-CDS-L-elsbetiae_contig1324:19172..193281691682929.4467604-CDS-L-elsbetiae_contig1324:19172..19328Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1324 19173..19328 +
1622815502.3327048-CDS-L-elsbetiae_contig1324:20136..202421622815502.3327048-CDS-L-elsbetiae_contig1324:20136..20242Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1324 20137..20242 +
1691682929.4549425-CDS-L-elsbetiae_contig1324:20136..202421691682929.4549425-CDS-L-elsbetiae_contig1324:20136..20242Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1324 20137..20242 +
1622815502.3420684-CDS-L-elsbetiae_contig1324:20532..205431622815502.3420684-CDS-L-elsbetiae_contig1324:20532..20543Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1324 20533..20543 +
1691682929.462477-CDS-L-elsbetiae_contig1324:20532..205431691682929.462477-CDS-L-elsbetiae_contig1324:20532..20543Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1324 20533..20543 +
1622815502.3515537-CDS-L-elsbetiae_contig1324:20876..209261622815502.3515537-CDS-L-elsbetiae_contig1324:20876..20926Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1324 20877..20926 +
1691682929.4701102-CDS-L-elsbetiae_contig1324:20876..209261691682929.4701102-CDS-L-elsbetiae_contig1324:20876..20926Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1324 20877..20926 +
1622815502.3611107-CDS-L-elsbetiae_contig1324:21380..214741622815502.3611107-CDS-L-elsbetiae_contig1324:21380..21474Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1324 21381..21474 +
1691682929.479648-CDS-L-elsbetiae_contig1324:21380..214741691682929.479648-CDS-L-elsbetiae_contig1324:21380..21474Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1324 21381..21474 +
1622815502.3710206-CDS-L-elsbetiae_contig1324:22312..223901622815502.3710206-CDS-L-elsbetiae_contig1324:22312..22390Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1324 22313..22390 +
1691682929.490672-CDS-L-elsbetiae_contig1324:22312..223901691682929.490672-CDS-L-elsbetiae_contig1324:22312..22390Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1324 22313..22390 +
1622815502.3804214-CDS-L-elsbetiae_contig1324:23158..232251622815502.3804214-CDS-L-elsbetiae_contig1324:23158..23225Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1324 23159..23225 +
1691682929.5016534-CDS-L-elsbetiae_contig1324:23158..232251691682929.5016534-CDS-L-elsbetiae_contig1324:23158..23225Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1324 23159..23225 +
1622815502.3897035-CDS-L-elsbetiae_contig1324:24019..244831622815502.3897035-CDS-L-elsbetiae_contig1324:24019..24483Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1324 24020..24483 +
1691682929.510405-CDS-L-elsbetiae_contig1324:24019..244831691682929.510405-CDS-L-elsbetiae_contig1324:24019..24483Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1324 24020..24483 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815502.4011705-UTR-L-elsbetiae_contig1324:24483..248201622815502.4011705-UTR-L-elsbetiae_contig1324:24483..24820Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1324 24484..24820 +
1691682929.519229-UTR-L-elsbetiae_contig1324:24483..248201691682929.519229-UTR-L-elsbetiae_contig1324:24483..24820Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1324 24484..24820 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1324.2521.1

>prot_L-elsbetiae_contig1324.2521.1 ID=prot_L-elsbetiae_contig1324.2521.1|Name=mRNA_L-elsbetiae_contig1324.2521.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=679bp
MSFTEMMQQAIQIRTSTDAKLRVDFDSRPKFQQSSMFATQEVQDARRLPL
KGRLAVCTAMKLRGNEQMRVSNYGEACEAYEQALAMFWYLENRNSSWKTS
GIKDEDITEVNFHPACGVKALEDETGRDLKVALLLNIARAYSARSDYATS
VKACDAALASNPSCAKALYLRGKALVTPASAGAFETEGALRDVSRAAELA
PGDSLIRGFLAKLRAEKARQKEADRATFAGMFGRGSVCDPEAETSKTRRL
HAPTHGDGKAERGVRRSPGVETGSEAPNSNDNDNDNGNDASDGGDGASGG
SKKRSGGADERRAREMRRDVEKKVELLKGMVREFDEEGRDEEADQYRERL
AAIEEILSEHDRQEQERVAGLRKSRAEADWRNPSEAMLERAEEEEYDLGD
PAVVSFLVKMQEGHRAKVEAPGKEAEERDDWTAEIWKGAILCMTRPEVTA
LLKEDLGFDPRPDTSLRELRNLAVCKLLGEQPSAERTGNASSTKGDEGPE
RKRADWKISAAISFLLFLFKAYQMGLWKWLLTGGSPPAGPVGPPGFVSPM
TDNENRVNRATGAARGRARGRRGWERRPYSSGVDADDARSARNTAGGGDV
GGSSLAAQVLASATQAVAAAPSEESLGGWFDSSADGACIAGEESGKHAVK
PTAEDDFEFLAAKWDGEEQDGGHDAGLG*
back to top

mRNA from alignment at L-elsbetiae_contig1324:13648..24820+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1324.2521.1 ID=mRNA_L-elsbetiae_contig1324.2521.1|Name=mRNA_L-elsbetiae_contig1324.2521.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=11173bp|location=Sequence derived from alignment at L-elsbetiae_contig1324:13648..24820+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCTTTCACGGAAATGATGCAGCAGGTGAGCGTGTGTCTGCTAAATTC AACATATATCTTGGAGTATGAAAGATCTTGGAGGCTTGTCCAAGATACAC CTTGGATCACACTGCTGGTGAACTGAAAGAGAACCAAGCCCTCAGGACTC TACGGTGTTTTTCCCTGCTGTTGTGATCCTCCGAAAAAAGTATGGGAGCA CAAGTACGGCGGGAAGCTGCGTACATGGTCCAATCCGTCTCGAAGCGCCT GCAATGAAAGGGACTGCTGCCATAAGCTTTTGTAGATTTATCGGTGTGTA CCCAAGTACCTCTGAACGGCGCCGTGTTTCGCAAGTTTCGTTGATTCTGG AAGTAATACCCAAAGAGAACATGCTGGAAGGCCATGCCAAGTGGTACAAT TCGGGGGATGGATAAGCTCCCGGGAAGCCTCATCCAAAGATGGGTTCTGT ACGTAGACTACTGCTGCTATTCCTGGAGAACACAGCCACTGCTGTGTGCG TTGATTCGGTTTGGTCGCCCTGATAGTCTAGACAGCTATCTTCTAGATAC GTACATAAATATGTAGATAGCACATATCTACATGCTGAAGGTTAGCCGGA TATCTATACTTCTGTTCAACACGGTTATCCTCGATTGTCCCTAAGCACCT ATGGTACGAGATGATTTAACGCAATCACGACGAGCTATATATCTGGTCTA TAGTCTATCACGGGTAGCTGTTTCGGATCTTCCGCATTTCCATCCGATTC CTGCGCTCAGATATCTATGTATCAGACAGATATCAGATATCTCATCTAGA CTAGACTTGGTATATTTATACATCTATCGAATGGTGCAGACAAAACGCGG TACCTACCGCTGGAAATTCCGGCGCGTCATTGGACACCACCAAAGCCCTC GCCCATTAACCAGCACCCATCCAACCTCAAGCCCCTCACCCGTAACCCAC CCACCGAATCTACAGGCCATACAGATCCGAACGAGCACGGACGCGAAGCT TAGAGTGGACTTCGACTCTCGGCCCAAATTCCAGCAGAGTTCAATGTTCG CGACCCAAGAGGTGCGATCAATCTCTCGCAGAAATTAGGCATAGTTTAGG ACCGCGACATGCCCGGCCATCAGAGTTGACCCCTTGCGATACTCTTTTTG ACATAGGTGACAGCTCTCGAAGCTGGGATAGTCACGGGGACGAAATGCCG ATATGTGCGCAGGTGCAGTGGGGTGGGGGTCTACCTTTGATGCGCTGAAG ATTCTGTGTTCACGTACCTAACGACCAAACCGATAGATCTAATATTTACA TGTAGTCTACATAGACTATCGGCATCTTTCATTTTTCTTGTGAGTGCGAC GGCTCTGCCGCGTGTGTATCATCATCAGACCTGGTGGTGGTAGCACACTA TACCACCACACCGCAAGTTGTCCACCCCTATATTCGACACTTATCGGGGA ATGGTGCGTCTCCACACTTGTATGTATGCGTAGATTATGTGTTGGACCAA TGGCTGCAAGGGTCAGGTGTGCACCATACACCCACCGTCCACAGCGTACA AAACCCAGTGTTTCATATTTAACGTACATTTCTGCGGCTGAAGTCTTACC GGTTGGTTGGCGACGCTTCAGGTGCAAGACGCTCGACGTCTTCCTCTAAA AGGGAGGCTGGCGGTGTGCACAGCGATGAAGCTCAGAGGCAATGAACAGA TGCGCGTCAGCAACTATGGCGAGGCGTGCGAAGCATACGAGCAGGTGAGC TTCGCGTTGGTGGGCAGCGCAGGGCGAGAGGGACCTTGTGTATGTTTGTA CATAAAAAGCGTTGGAAAAAGTACGATGGACGCAATTGCAACAGCGACAT CACACCACTGATTGTGACATCGTATTCCGGTGCAAGCTGGTTGCGTAGTG CCTCGGCGTCTTAACCGAATCTGAAATATCCGCTCGTGTGGCGTGGCTTG ATTGCGCCCCCTAAATACATACTTCGTACATAAAATGCCCGGAAACTTGG TTGGTCTACATTACACCAATCACCTCACGCAGGAGGCATTCAGCCTGGGC TGAAAGCGCCGACAGCGCGTTCTGGGCTGAAATTTGTGGACGCCCGTATT GAGAAATCATTTTTTTTCTGCCTTCGTGGGGCGCACGCAAATCGTCCAGG CGCTCGCGATGTTCTGGTACTTGGAAAACCGCAACAGCAGTTGGAAGACG AGTGGGATCAAGGACGAAGACATCACAGAAGTGAACTTTCACCCAGCGTG TGGGGTGAAAGCGTTAGAAGACGAGACAGGGTAAGACATAGTCTATGTGC TTAGAAACCATAACTAGATAGATATGTAGAAAGATATACAGTACTGCCAT CTACAGCCTGTCGAGAATACCGTGGCTGCTACTAATGCTGTAGGTGGTGT TTTTTTATCCTATTGTCCGGTATCCACCTTTGAGTTGGATACGGTGTCAG TATGACCCTATTTATCCCTCTAGATGTGCTAGCCTGTTGCTACTCACGAA AAAGAAAAACGGGTTTGTTGCGTTCAGCAAATGTTGTCTCCTTGTCCCAC GCGCGAACTACGATAGTTCTGACTCTGGCGCGCACGCCAAGGCAACGTGG TCAGAACTCCCGCACAGCTACCAATACTACTCTAGCTAGCCAACCCACTC AACGCCAAAACACGAGATGCATCTCCAGAACTAAACAACCGATTCGGTGC ACCCGCTTCAGCTCCCAAGGCATCCGCAGCCGTTGTTCCTAAAGCCTCGC GCCAATTTGTCGTATTGCGCCCAGCAGGGATCTGAAGGTGGCGCTTCTTC TAAACATCGCGCGGGCGTACTCCGCCCGGAGCGACTACGCGACCTCCGTC AAGGCGTGCGACGCCGCCCTGGCATCGAACCCTTCCTGTGCCAAGGCATT GTACCTGCGGGGAAAGGCCCTTGTGACCCCGGCCTCGGCGGGGGCGTTCG AGACCGAGGGGGCACTCCGGTGAGTGCAAGCGTTTCGAAGCATCGTGTTC GATGTCGCCACCCGCACTGCACTGCAGGATGGATGGGTGTTGAGTATGGG AACTATGCACACATGTTAACCCAGGAACGGGTGTAGTCATCATATTGCTG GCTCTGCGCAGTGAGCACGGGGCGGACCCCGCTCTCTCTCCCAGGGGCCC ACTCGTACCCCCGCTCCACACGATATCCTACCTACACGCGTAGCCCCCGG AGGAGACGCATGTATCTATCGGACTCAGATCCAAAGCACCACGAACGAAC ATGTCGAACTTTTGCAGTCGATGGTTTAGGAATGCATCCACCACGCACTC CTATCTTCCACTTGGCGACGGGGATGACGATATGCTATCTGGATATGTAG TGTCTCTCAAATCGCGTGCATCCACCACGCACTCCTATCTTCCATTTGGC GACGGGGATGACGATATGCTATCTGGATATGTAGTGTCTCTCAAGTCGCG TGCCCCCCAAGTCGCGTGCTCTACCCCGAGGAGGAACGTTTGGAGACGGA GAGGAGCTAGCCAGCCCCGCTTTGTGCAACAGACCTGAGTCTTCGTTGGC TCCGAAACAGCGCGAAAACTACGGGGGGCGAGGGAAACGGGGTTCGGTCT GCCGCGAGGAAACCTTTTCTCCCGGGTGCGCCACCGCCTTCGTCTCGCGC CAGCAAGCGGCCGTCGTGTGGGCCTCAAAAGCAAAAGCACTATTGTGCGG GGCCCCGTTTTTCTCCTGCGCAGCGGTCTTCGGGACGACCCCCCCCCCCC CCCCCTTGCTCCTTTATGTAGATACCATCAGGTTGTGGTCGCTCAAGCTC TTCGGACGGCGTATCTTTGTGCGTAATGTGTGCTACATACACGCCTGCAG CTTAGTGTGTGCTACATACAAACGTGCAGCTGCTACAAAGAAGGCGTGAC GCCTGAAGAACCCCCCCTTGCGCGCTCAACATCTTCTCGGCTGTTTGCTG TTGGCATCGAGCTGGCAGGGACGTCTCGCGAGCCGCTGAGCTCGCCCCAG GCGACAGCCTCATCAGGGGGTTCTTGGCGAAGCTGAGGGCCGAGAAGGCC AGGCAGAAAGAGGCAGACCGAGCCACCTTTGCCGGCATGTTCGGCAGGGG GAGTGTCTGCGACCCAGAGTAAGAGCCGTTCAGGAAGTGTGTGCGACCCA GGAGTAAGAGCTGTTCAGGAATTGTTCGCGACCCGGGAGTAAGAATTGTT CAGGAAGTGTCTGCGACCCAGGAGTAGGAAATCCTCAGCAAAAGTCGTCT GCGACCCAGAGCAAGAACTGCTCATGAAGGGGCGGGGGTTGATGCGTGGC GTTTCCGATGTCTGGGTTGCCACCGCGGTGGGTTTCGCTCATCGTTACAC ACGAGTACTTTTAGGAGCACTTAACAAGAACAAATGGGCTCTCTTCGTGT TCGAGTTAGGTTTCTAAGCTTATTTGTGCTCAAAGGACGACGAGGTCTTT CAAGTATCCGCTGCGCACTTTTTTTCGTTGCACGCATTGCTGCTGATGAA GGGGGTTTCGGGGAAACGAGAGAGCTGCCAGTTCTTCAGGGCATATTTAG CATCGTGAAGGTGGGGTAGCTGGTTCCGAGGGAGGCTTTATCCTATCTGT AACGACGATCGCCGAGGGTGGCTCGACAGTCTGACTGGAGTAGCCAAGTT GACAACACTTCCACCCTCTGAGCCACTGTTGCTCGCGCAATCCCAACACC TGCACAGGGCGGAAACATCGAAGACCAGACGCCTCCACGCGCCGACTCAC GGCGACGGAAAGGCGGAAAGAGGCGTGCGCCGCAGCCCGGGGGTGGAGAC CGGCAGTGAAGCACCCAACAGCAACGACAACGACAACGACAACGGAAACG ACGCCAGCGATGGCGGCGACGGTGCCTCCGGCGGCAGCAAAAAAAGAAGC GGCGGCGCGGACGAGAGGAGGGCGCGTGAGATGCGCCGAGACGTGGAGAA GAAGGTGGAATTGTTGAAGGGCATGGTTCGGGAGTTCGACGAAGAGGTAT GCATGCATTGGACGCTACTGTCGCCATCCGCGTCACGTACGTACGGCTGG ATCGTTGTTTTTTGCCCGCCGTCTCGGGTATGAACGACGCTGGAGCACGA AGATGTCAGGCTAACACTCCTACTTCGTACATATAACTTTCGACTCAGCA TGGGAATGTACCACCGTTGACACAAGGTACCGCACCCCCTGGACAGATTT CCAAAGCTCGATTCCTCCCCAGCGAGAAGAGTGCCAGTGTCCAAAGAGGG TGGCGTTGGAAAGATCTAGTCGACGGCTGTCCGAAAAACGTGTCGTTTGG TGCTGGCACCCTCTTTGTAACGGGAGTAATGGAGATCTAAAAGTCGGTCC AGAAGGGGTGTGGTATCTTGTGTCACCTACAACAATTGGCCTCTTCGTTT GCCACCCAGTGGGTTTGGAGAGGTTTGATTGGCGTGGAATGGTTGGTATA GACGCAAATGGCTAATGTCGCGTGAAAAACACAACCACCCAAAACACCAC CAATCAATGCGGACGGGTCATGCAGGGTCGAGACGAAGAGGCCGACCAGT ACCGAGAGCGCCTTGCGGCCATCGAGGAAATCCTGTCGGAGCACGACAGA CAGGAGCAGGAGCGCGTGGCCGGTCTGCGGAAGTCTCGCGCCGAAGCGGA CTGGCGTAACCCCTCGGAGGCCATGCTCGAGGTGGGGTGCTCTTTTTTCT GTTCACGCAGGCACAACACCTGTATCTAGTTGATTGACTTGGACGGCGAC TCCGTGAGGGCCATGGGGGTCGGGGACGATGTTGAGAGATTCAGGCTCGG GATAAGGGAACGGTGCCGGGCCGGGGGGGGGGGGGTAACTAGATGGGGAG TGCTGAACCCTGCTCGCAATAAAAACATCATAGGCAGGCACCGCAGGAGG GGCCCTCCTGTGTGACCCCGGTTGGGTCGTCTAGCTACTCGTAGTGGAGG AAGGGGGCCAGTGGGGCAGGCGACGAATATCTAAGCGAATAAGCCAATAA TGGGAGGAAAAAAACAAAAACGTAGCGCCGCTGGTTGGACAGAGTGGTCG TCAAGGTGGGCCGGATGGAACAAAACGTCCTAAGAACGAAAACCTAGCCG ATTGTTGCGATGGACCAAAGACCAACGATGCTTCAGGATACAGCAATTGG CTTGAGTTTAACAGTGATCGATTGGGCTTTGATTTCTTCGAAACACGCGA ACCGGTTTTCGACTACATATTTGACATAGGTTGCTGACGTTTTTTCTCGC TCCCGTTTGTTGAAGTCCCGATGACGAATGGGCGGGAGCGAGGCGGAAGC TTTTGATGCATCTGTACAGGCCACCCTTTGAGTGTCTGGTCCCGAAGCAC GTCGCGCCCCTCCACTTCTTCACTTGCGACCACCCATCCATGCGTACCCG AGCAGAATCGAGTAAATCACCCCCACGAGTTGTTTCCATGCTAATCTCTG TCCAATGCACTCGCACGCTTGCCGTATTTTGACCGCCAGAGGGCGGAGGA AGAGGAGTACGACCTGGGCGACCCGGCGGTGGTTAGCTTCCTCGTCAAGA TGCAGGAGGGCCACCGCGCCAAGGTCGAGGCGCCGGGAAAGGAAGGTCGC CCACACGGCGGCGGCGGCGGCCGCGGCGGCGGCGGCGGCAGCAGCGGTGG CGGCAGCGGTGGCGGCAGCAGCCGCGGTGGCGGTGGGAGCGGCGGTGGCG GCAGCAGCAGCGGTGATGGTGGGAGCGGCACTGGCAGTTGCACCAGCGGC GACGGCCCTGAAGACAGCTGGGACAGCGACACCGCGGACCGAGATGGCGG CTTGTCGGGATGGGATGTTGATCAGGTGTGTGCGCTGGCCCTCCTTTCTC TGTGCGTTGGTTGCGCTTGTAAAGTACCTATCCAGCTGAAGAGCGCGTCA TGTTGAGGGTCCTGAGGGTCCTGTACGTAGGCAATTGGTGTTCTCATATT GCAACAACAACAACAACAACAAGGGGAAGATACACAGTAGTAGTAGATAG TAAAACAAATGCAGTCTTCTATACCACTGCCCATGTTTTGGCCTGGTGTC TTGCGCGTTGCCGAGACTGGACCGCGAAACGCGTTGTGGTGGTTGCAGAA CGTCTTTTCAACTATGTATGTACCTCATACACGTACTGCTGTACTGTGTA TCCACCCACGATTGATTTTGCAAGTTCGGATCTTGCGACGTATTTTGCAC GTCGACCGGGACTGTCAACACATACACAGGATGACTGGACTGCAGAGATT TGGAAGGGCGCCATCCTCTGCATGACCCGGTAAGTACGCTGCAGCCAACA GTGAGAGTACGCGCCGGCTCGATCTGCTTGTGCTGGGGCCTCGGGCAAGG TTTCTTCAGCCTTGCCGGGGTACTGTGTTGACGGAGTGATTTCCAAACCC GGCCATATTCGAATGCACATTTTCTCTTCCACTTGCCCTGTGCGGCGGCT TGCGCGTCTCGGATGCTGAAGGGGCTGGATCCAGGGAGGAGAACGCGTTT GCACGGAGATGATAGGAACAGCAGTAGTGTGCGGGTCTTGCTACGGCCGG GCAGCAAGAATGGCACGAAAATCAAAATACCAGTGATGCACGTTGCAGAC CTAAAATTCCAGTCAGGCTCCAGCCTTTGTGCCTTTGTCTTCGTTTCACT GAACATCGCGGTGGCCGGCAAAGCACAACAACCTTAGCATGCGCTTCGAA TGCCTCTTGTGCTGTGACCGGTTGCATGCTTAGGCCCGAGGTTACTGCAT TGCTGAAGGAAGACTTAGGGTTCGACCCGCGGCCGGACACGTCTCTGCGC GAGCTTCGAAATCTGGCCGTCTGTAAGGTGCGAGCTAGTTAGCTCGGGCA GGGGAGAGTATATATATATATGTATATATACCGCCGTATGACGCCACTTT GAGTCCCCACGGGGTGATCGCAAAGCAGAGGTTGGCACACGGTTTTATCG TGGGCTCCATTTCCCATTGATGTAGCTGCGACAGGGGGAGATACCAGGGT AGCCATTTTAGAAGTGAGTAGTATGCTGGCAGTGTCCTTCTTTTGCCGGT GGTGTCATCTCCTCTGTCTTGCCCCAAGGGGTACGGCTTTGTTCCGCAGA AGCACGCTTTGTCCCGCAGAAGCACGCACGGCGGAGTACGTGCGAGGCAG CGTTCCCGGTAGCTGTTGTTGCGCTGTTGCGGCTTGGCAACAAAACCAGA AAAAAACAAGAAAAGAGCGAACGCGTAACACCGGTGTTGGTTTGTGTCGC GGCTTGCCGCAACAGAACAAAACAGGGCGCACAGATTTCTCCGTGTAGGT GAAAAACAAGGTTGCGGCAGCATATCTGCGCCGAAGGCACCGAAAAGTTT TTGATACTCTTTTTTGATACAATCGAGCGCCTTTTGCGGTAAAAAGTGAT TTTTTCCGGTGGAAAATACGCATACATATGGAGTCTTGCATTTTTCGCTG CTGGCGGCCCTCCCGGGGGGGCGCGGGGGTCCTCCGGGGGCTCCTGCGGG GGATGTAGAGCCGCAACACATCTGTGACGTTCTGTTGCGCCAATCTGCGA TGGCCGCAGCAGAGGCTGGCCTATCGAGAAGACTGCATGCGAGGAGATAC CACCCGTTTGTGGGACCCACTCCGTCCAAATTTCTGTTTCGATGCTTGCC TTGTGTTTTCTGAAGCTCCTAGGGGAGCAACCTTCGGCCGAAAGAACAGG GAACGCCTCCTCGACCAAGGGTGACGAAGGGCCAGAGCGAAAGGTGCGGT GGAGGTGGTGGAGGTGATAGGGGGGCGGGCGTACTCGAAAAGTAAGCTGC TTAACAGTAGCGGCCTTCCCGATAAACAACAAACACAAAGCAGTAGTTTA GGTGTTGTTCTACGGAGCTGGGCTAGTATTACGTCACTATATGGAATACC GATGGAATCTCACGGGAGTCTCGTCTCCAATGTGGGTTAGGTTCCGTTTT TGATTAAGTGCTTTTCTTTCAAAAGGGAACATTTCAAGTGGAAAACACCA TACTTACATAGAATATTGTAACCTACGCCGCAAGATACCATCTGTCGCGG CGCTATCTGTTGCTCCAGAAGCACCCAATCCGCATATTCCTCGTTCTCTG TGGGTAAACTTAAACTCCGCTTCTAGGCATAAAAATGACCGTGCAGCGTC TTGCGAGAAGCGAAGCCCTTCCTGATTCTACAGTAGTAGTAGGAGAGCCG CACGCAAGAGTAAATTTGGCGCTGCTGTGAGACAGGCAGAGGCCTTCGTG GTTATTTTCGGAAAATCGAGAGGGGGTCACCGTCCCCGGCCCCGCCCCCC GCCTCCTCTCCCGGAGGCAGCAGCAACTCCTGAAGGAAATTATTCAAGCA GCCACTTTGATCCCAGCAGGGGTATCGCGGCGGTGCTTGGGGTAACAACA GTGCGGTCAATGTGCAGCCTCGCATCGGATGCAAACGGAACACGTGACGC CCCTCACATCACCGTTTTGTCGTCCACGAAAAAATGCATTGTTGTTTTTG TACCACAGCAGAGGGCTGATTGGAAAATCTCTGCGGCCATCAGTTTTCTC CTCTTCTTGTTCAAGGCTTACCAGATGGGTGAGAATCGGCATGGATGGCG TTCAACCTCGTCGCCTGGATAGTGGACGGAGTGATGCGATATATCGGCGT TCTCATCTTGCCATTTCATTTCTCTTTTGAGGGGTTGATTGTGGCCGCTA GACTATATCTATCAGCCCGAATTGGCGATGTCCTGAATTATCTTTCACAA ATTTGGCTTGTATGTTAAAAAAGAGACAATAATAGCTCGATACAGTAACC GTGCCGGGGGACCCGGGCGGTTTCATTTGCGCTTCTTAACGGCGGACAGA CTACTTGTTGATTCTGAGTTTTCTTATGGTGCTCACCCACATCAGTCCAC ATTACCTGTACTTCTAAATTCACCATTGATCACCAGCATACACGGCAGGC AGTAGTAGATTTATATCGCGAAACTACTTACTCCTATGTACGGACGAGCT GATATCAGTGTTTAGGATAGGCTCAGGATCAGACTTGGGCTGGGTGAGTG AAGGAAACCAATGTCCCCCAACACACTTACTCTAGTCTAGTAATTGTAGT AGACAGCCAGCCCCCTTTATCACAGCGAGCGGCCCATACCTCCTGTCGGC CTGCAACCTACAGTAATTTAGCGCCATCTCTTTGCCGCCCCTCCGCCATC AACACCAAAAGTCCGACTAAAAACACCTTCCGAAATAAGTACATTACCTG AACAGGCCCACCAATGGTGCATTGTAATCTCAACACAACCTCACGCCCCT GCAACGCTCGCTTACCGGCAACCTCGGTGCTGCTGTTGTTGCGGTCCGGA ATCATCGTTTCCGGTGATGAAGGTCTGTGGAAGTGGCTGCTAACCGGAGG AAGTCCTCCCGCTGGGCCGGTAGGCCCGCCAGGGTTTGTGTCTCCGATGA CGGATAATGAAAATCGTGTGAACCGAGCTACAGGAGCAGCTAGGGGAAGA GCAAGAGGGCGACGAGGATGGGAGCGGCGCCCGTACTCGTCGGGTGTCGA CGCCGATGACGCCAGGAGTGCGAGAAACACTGCCGGTGGTGGTGATGTTG GCGGAAGTAGCTTAGCCGCGCAAGTGCTTGCCTCGGCTACACAAGCCGTG GCTGCAGCTCCTTCAGAAGAGAGTCTTGGAGGCTGGTTTGACAGTAGTGC CGATGGTGCTTGCATAGCAGGGGAAGAGAGTGGGAAACACGCAGTGAAGC CTACGGCGGAGGACGACTTCGAATTTCTAGCTGCAAAATGGGATGGGGAA GAACAAGACGGTGGGCACGACGCTGGATTAGGTTGACAGGGACAAAAGAT AGGTAGACCAGTAGACCAATGGCAATGATTGAGAAGGTTCGTCAATAGGG TGGCATCTAAACGTCGCAATCTTCGATGGTGTATTGACATTCTATCTAGG GCAGGATCCATCTATGGATGGACCAAAAAGTAAGAAATTTTCGATTTTGA TCGGACGCACGCAGCACGGGACACCCATCAACGAGGATTGCTGAATAGCG AATGAATACGCTCTGCATTCGATTCTTTTTTTTTCGTCGTAGGTGGACAT GTTTGATTCTTGTCGCCTTAGAAGTCGCGCCCGAAACTTCTCTTCGGCTG GAAAGATGGAACCTACATCTTAG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1324:13648..24820+

>mRNA_L-elsbetiae_contig1324.2521.1 ID=mRNA_L-elsbetiae_contig1324.2521.1|Name=mRNA_L-elsbetiae_contig1324.2521.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4074bp|location=Sequence derived from alignment at L-elsbetiae_contig1324:13648..24820+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCTTTCACGGAAATGATGCAGCAGATGTCTTTCACGGAAATGATGCA
GCAGGCCATACAGATCCGAACGAGCACGGACGCGAAGCTTAGAGTGGACT
TCGACTCTCGGCCCAAATTCCAGCAGAGTTCAATGTTCGCGACCCAAGAG
GCCATACAGATCCGAACGAGCACGGACGCGAAGCTTAGAGTGGACTTCGA
CTCTCGGCCCAAATTCCAGCAGAGTTCAATGTTCGCGACCCAAGAGGTGC
AAGACGCTCGACGTCTTCCTCTAAAAGGGAGGCTGGCGGTGTGCACAGCG
ATGAAGCTCAGAGGCAATGAACAGATGCGCGTCAGCAACTATGGCGAGGC
GTGCGAAGCATACGAGCAGGTGCAAGACGCTCGACGTCTTCCTCTAAAAG
GGAGGCTGGCGGTGTGCACAGCGATGAAGCTCAGAGGCAATGAACAGATG
CGCGTCAGCAACTATGGCGAGGCGTGCGAAGCATACGAGCAGGCGCTCGC
GATGTTCTGGTACTTGGAAAACCGCAACAGCAGTTGGAAGACGAGTGGGA
TCAAGGACGAAGACATCACAGAAGTGAACTTTCACCCAGCGTGTGGGGTG
AAAGCGTTAGAAGACGAGACAGGGCGCTCGCGATGTTCTGGTACTTGGAA
AACCGCAACAGCAGTTGGAAGACGAGTGGGATCAAGGACGAAGACATCAC
AGAAGTGAACTTTCACCCAGCGTGTGGGGTGAAAGCGTTAGAAGACGAGA
CAGGCAGGGATCTGAAGGTGGCGCTTCTTCTAAACATCGCGCGGGCGTAC
TCCGCCCGGAGCGACTACGCGACCTCCGTCAAGGCGTGCGACGCCGCCCT
GGCATCGAACCCTTCCTGTGCCAAGGCATTGTACCTGCGGGGAAAGGCCC
TTGTGACCCCGGCCTCGGCGGGGGCGTTCGAGACCGAGGGGGCACTCCGC
AGGGATCTGAAGGTGGCGCTTCTTCTAAACATCGCGCGGGCGTACTCCGC
CCGGAGCGACTACGCGACCTCCGTCAAGGCGTGCGACGCCGCCCTGGCAT
CGAACCCTTCCTGTGCCAAGGCATTGTACCTGCGGGGAAAGGCCCTTGTG
ACCCCGGCCTCGGCGGGGGCGTTCGAGACCGAGGGGGCACTCCGGGACGT
CTCGCGAGCCGCTGAGCTCGCCCCAGGCGACAGCCTCATCAGGGGGTTCT
TGGCGAAGCTGAGGGCCGAGAAGGCCAGGCAGAAAGAGGCAGACCGAGCC
ACCTTTGCCGGCATGTTCGGCAGGGGGAGTGTCTGCGACCCAGAGGACGT
CTCGCGAGCCGCTGAGCTCGCCCCAGGCGACAGCCTCATCAGGGGGTTCT
TGGCGAAGCTGAGGGCCGAGAAGGCCAGGCAGAAAGAGGCAGACCGAGCC
ACCTTTGCCGGCATGTTCGGCAGGGGGAGTGTCTGCGACCCAGAGGCGGA
AACATCGAAGACCAGACGCCTCCACGCGCCGACTCACGGCGACGGAAAGG
CGGAAAGAGGCGTGCGCCGCAGCCCGGGGGTGGAGACCGGCAGTGAAGCA
CCCAACAGCAACGACAACGACAACGACAACGGAAACGACGCCAGCGATGG
CGGCGACGGTGCCTCCGGCGGCAGCAAAAAAAGAAGCGGCGGCGCGGACG
AGAGGAGGGCGCGTGAGATGCGCCGAGACGTGGAGAAGAAGGTGGAATTG
TTGAAGGGCATGGTTCGGGAGTTCGACGAAGAGGGCGGAAACATCGAAGA
CCAGACGCCTCCACGCGCCGACTCACGGCGACGGAAAGGCGGAAAGAGGC
GTGCGCCGCAGCCCGGGGGTGGAGACCGGCAGTGAAGCACCCAACAGCAA
CGACAACGACAACGACAACGGAAACGACGCCAGCGATGGCGGCGACGGTG
CCTCCGGCGGCAGCAAAAAAAGAAGCGGCGGCGCGGACGAGAGGAGGGCG
CGTGAGATGCGCCGAGACGTGGAGAAGAAGGTGGAATTGTTGAAGGGCAT
GGTTCGGGAGTTCGACGAAGAGGGTCGAGACGAAGAGGCCGACCAGTACC
GAGAGCGCCTTGCGGCCATCGAGGAAATCCTGTCGGAGCACGACAGACAG
GAGCAGGAGCGCGTGGCCGGTCTGCGGAAGTCTCGCGCCGAAGCGGACTG
GCGTAACCCCTCGGAGGCCATGCTCGAGGGTCGAGACGAAGAGGCCGACC
AGTACCGAGAGCGCCTTGCGGCCATCGAGGAAATCCTGTCGGAGCACGAC
AGACAGGAGCAGGAGCGCGTGGCCGGTCTGCGGAAGTCTCGCGCCGAAGC
GGACTGGCGTAACCCCTCGGAGGCCATGCTCGAGAGGGCGGAGGAAGAGG
AGTACGACCTGGGCGACCCGGCGGTGGTTAGCTTCCTCGTCAAGATGCAG
GAGGGCCACCGCGCCAAGGTCGAGGCGCCGGGAAAGGAAGAGGGCGGAGG
AAGAGGAGTACGACCTGGGCGACCCGGCGGTGGTTAGCTTCCTCGTCAAG
ATGCAGGAGGGCCACCGCGCCAAGGTCGAGGCGCCGGGAAAGGAAGCTGA
AGAGCGCCTGAAGAGCGCGATGACTGGACTGCAGAGATTTGGAAGGGCGC
CATCCTCTGCATGACCCGGATGACTGGACTGCAGAGATTTGGAAGGGCGC
CATCCTCTGCATGACCCGGCCCGAGGTTACTGCATTGCTGAAGGAAGACT
TAGGGTTCGACCCGCGGCCGGACACGTCTCTGCGCGAGCTTCGAAATCTG
GCCGTCTGTAAGGCCCGAGGTTACTGCATTGCTGAAGGAAGACTTAGGGT
TCGACCCGCGGCCGGACACGTCTCTGCGCGAGCTTCGAAATCTGGCCGTC
TGTAAGCTCCTAGGGGAGCAACCTTCGGCCGAAAGAACAGGGAACGCCTC
CTCGACCAAGGGTGACGAAGGGCCAGAGCGAAAGCTCCTAGGGGAGCAAC
CTTCGGCCGAAAGAACAGGGAACGCCTCCTCGACCAAGGGTGACGAAGGG
CCAGAGCGAAAGAGGGCTGATTGGAAAATCTCTGCGGCCATCAGTTTTCT
CCTCTTCTTGTTCAAGGCTTACCAGATGGAGGGCTGATTGGAAAATCTCT
GCGGCCATCAGTTTTCTCCTCTTCTTGTTCAAGGCTTACCAGATGGGTCT
GTGGAAGTGGCTGCTAACCGGAGGAAGTCCTCCCGCTGGGCCGGTAGGCC
CGCCAGGGTTTGTGTCTCCGATGACGGATAATGAAAATCGTGTGAACCGA
GCTACAGGAGCAGCTAGGGGAAGAGCAAGAGGGCGACGAGGATGGGAGCG
GCGCCCGTACTCGTCGGGTGTCGACGCCGATGACGCCAGGAGTGCGAGAA
ACACTGCCGGTGGTGGTGATGTTGGCGGAAGTAGCTTAGCCGCGCAAGTG
CTTGCCTCGGCTACACAAGCCGTGGCTGCAGCTCCTTCAGAAGAGAGTCT
TGGAGGCTGGTTTGACAGTAGTGCCGATGGTGCTTGCATAGCAGGGGAAG
AGAGTGGGAAACACGCAGTGAAGCCTACGGCGGAGGACGACTTCGAATTT
CTAGCTGCAAAATGGGATGGGGAAGAACAAGACGGTGGGCACGACGCTGG
ATTAGGTTGAGTCTGTGGAAGTGGCTGCTAACCGGAGGAAGTCCTCCCGC
TGGGCCGGTAGGCCCGCCAGGGTTTGTGTCTCCGATGACGGATAATGAAA
ATCGTGTGAACCGAGCTACAGGAGCAGCTAGGGGAAGAGCAAGAGGGCGA
CGAGGATGGGAGCGGCGCCCGTACTCGTCGGGTGTCGACGCCGATGACGC
CAGGAGTGCGAGAAACACTGCCGGTGGTGGTGATGTTGGCGGAAGTAGCT
TAGCCGCGCAAGTGCTTGCCTCGGCTACACAAGCCGTGGCTGCAGCTCCT
TCAGAAGAGAGTCTTGGAGGCTGGTTTGACAGTAGTGCCGATGGTGCTTG
CATAGCAGGGGAAGAGAGTGGGAAACACGCAGTGAAGCCTACGGCGGAGG
ACGACTTCGAATTTCTAGCTGCAAAATGGGATGGGGAAGAACAAGACGGT
GGGCACGACGCTGGATTAGGTTGA
back to top