mRNA_L-elsbetiae_contig13188.2490.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13188.2490.1 vs. uniprot
Match: A0A6H5JTQ7_9PHAE (ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTQ7_9PHAE) HSP 1 Score: 444 bits (1141), Expect = 9.790e-149 Identity = 233/301 (77.41%), Postives = 244/301 (81.06%), Query Frame = 1 Query: 4 QRDFSTAMSNKDQEGFYRGTRRYVTILLAAAPLFALSRFVQGKLGLDWRRWLTEHLCGLYFGNRAFYALKIGYLSPGKTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGITHAVKRIDNPDQRIGEDISTFTRNCIDVVVVFVGALLKVGSFVGVLLSISPRLTAFVVVYSALGTLSTTALFGARLKHLIFEGAKREANFRFGLVRVREHAEEIAFYRGEKGEKEGIKRLLEKVVSNIHLRLWCDAQLAVFSNSFMWLTAVLPYLVVAERYFAGEMEFGVISQVRLGAR 906 QRDFSTAMSNKDQ+GFYRGTRRYV ILLAAAPLFALS+FVQGKLGLDWRRWLTEHLCGLYF NR+FYALKIGYLS KTT RGGI + V +DNPDQRIGEDISTFT+NCIDVVVVFVG++LKVGSFVGVLLSISPRLTAFVV YS GTLSTTALFGARLKHLIFEGAKREANFRFGLVRVREHAEEIAFYRGEKGEKE +K LLEKVV N HLRLWCDAQLAVFSNSFMWLTAVLPYLVVAERYFAGE+EFGVISQ + R Sbjct: 63 QRDFSTAMSNKDQDGFYRGTRRYVVILLAAAPLFALSKFVQGKLGLDWRRWLTEHLCGLYFQNRSFYALKIGYLSSSKTTASSPGTEGQQQDGAEGNGSAAAIWFGAREEEQQ-----RGGIDNPVSAVDNPDQRIGEDISTFTKNCIDVVVVFVGSVLKVGSFVGVLLSISPRLTAFVVAYSVAGTLSTTALFGARLKHLIFEGAKREANFRFGLVRVREHAEEIAFYRGEKGEKEVVKGLLEKVVGNTHLRLWCDAQLAVFSNSFMWLTAVLPYLVVAERYFAGEIEFGVISQTAMAFR 358
BLAST of mRNA_L-elsbetiae_contig13188.2490.1 vs. uniprot
Match: A0A2K1JHE7_PHYPA (Uncharacterized protein n=5 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JHE7_PHYPA) HSP 1 Score: 194 bits (492), Expect = 4.860e-54 Identity = 112/295 (37.97%), Postives = 163/295 (55.25%), Query Frame = 1 Query: 4 QRDFSTAMSNKDQEGFYRGTRRYVTILLAAAPLFALSRFVQGKLGLDWRRWLTEHLCGLYFGNRAFYALKIGYLSPGKTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGITHAVKRIDNPDQRIGEDISTFTRNCIDVVVVFVGALLKVGSFVGVLLSISPRLTAFVVVYSALGTLSTTALFGARLKHLIFEGAKREANFRFGLVRVREHAEEIAFYRGEKGEKEGIKRLLEKVVSNIHLRLWCDAQLAVFSNSFMWLTAVLPYLVVAERYFAGEMEFGVISQ 888 QRDFSTA+S+KD FYR RR+V I++ AAPL + +++Q L L+WR W++E+L YF NRA++ LK+ GK +DNPDQRI ED+ +F +N ++++ +F G L V F GVL +I+P L F+VVY+ GTL T FG RL L F+ +REA FR+ LVRVR++ E IAFY GE E K L +V N+ + + L++F+N + + ++P ++VA RYF+G+++FGVISQ Sbjct: 5 QRDFSTALSSKDVAEFYRAIRRFVMIVIFAAPLDSFYQYMQELLSLEWRAWMSEYLLSSYFSNRAYFDLKMD----GK--------------------------------------------------VDNPDQRICEDVYSFVKNSVEIIALFSGKFLSVIGFAGVLWTIAPELVYFLVVYATFGTLVTVKGFGGRLTSLKFKALQREAEFRYSLVRVRDNVESIAFYGGESHEAATTKDFLVSMVENVRELIVWNRHLSLFNNIYEFSMIIVPSIIVAPRYFSGQVQFGVISQ 245
BLAST of mRNA_L-elsbetiae_contig13188.2490.1 vs. uniprot
Match: A0A2R6WQG5_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WQG5_MARPO) HSP 1 Score: 193 bits (491), Expect = 2.330e-53 Identity = 114/296 (38.51%), Postives = 165/296 (55.74%), Query Frame = 1 Query: 4 QRDFSTAMSNKDQEGFYRGTRRYVTILLAAAPLFALSRFVQGKLGLDWRRWLTEHLCGLYFGNRAFYALKIGYLSPGKTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGITHAVKRIDNPDQRIGEDISTFTRNCIDVVVVFVGALLKVGSFVGVLLSISPRLTAFVVVYSALGTLSTTALFGARLKHLIFEGAKREANFRFGLVRVREHAEEIAFYRGEKGEKEGIKRLLEKVVSNIH-LRLWCDAQLAVFSNSFMWLTAVLPYLVVAERYFAGEMEFGVISQ 888 QRDFSTA+S K+ EGF+R R++ I++ A PLFA ++Q L L+WR WL++ L YF NRA++ LK+ GK +DNPDQRI ED ++F RN ++++ + L + +F GVL SI+P L F++ YS +GT T LFG +L L F+G +REA+FR+ LVR+R++AE IAFY GE E + IK +++N L LW L +FSN++ + V+P +++A RYFAGE+EFGVI+Q Sbjct: 74 QRDFSTAISEKNVEGFHRAVMRFIGIVIIATPLFATYHYLQDLLALEWRIWLSDLLLSNYFSNRAYFDLKM----EGK--------------------------------------------------LDNPDQRICEDAASFVRNSVEIIALIGSKFLNICAFTGVLWSIAPELVYFLLGYSVIGTYVTVRLFGKKLMQLQFQGLQREADFRYSLVRIRDNAESIAFYSGETHEAKTIKGFFSALIANSRDLILW-RRHLGLFSNAYEFSMLVVPSIIIAPRYFAGEVEFGVIAQ 314
BLAST of mRNA_L-elsbetiae_contig13188.2490.1 vs. uniprot
Match: A0A1Y1HP97_KLENI (ATP-binding cassette transporter n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HP97_KLENI) HSP 1 Score: 191 bits (486), Expect = 7.930e-53 Identity = 105/301 (34.88%), Postives = 160/301 (53.16%), Query Frame = 1 Query: 4 QRDFSTAMSNKDQEGFYRGTRRYVTILLAAAPLFALSRFVQGKLGLDWRRWLTEHLCGLYFGNRAFYALKIGYLSPGKTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGITHAVKRIDNPDQRIGEDISTFTRNCIDVVVVFVGALLKVGSFVGVLLSISPRLTAFVVVYSALGTLSTTALFGARLKHLIFEGAKREANFRFGLVRVREHAEEIAFYRGEKGEKEGIKRLLEKVVSNIHLRLWCDAQLAVFSNSFMWLTAVLPYLVVAERYFAGEMEFGVISQVRLGAR 906 QRDFSTA+S KDQ F++ R++ IL+ A PLFA+ +VQ L L+WR W+T L YF RAF+ LK+ +DNPDQRI +D+ F + +VV +L +F GVL S+SP L F++ YS +GTL +FG ++ HL +E R+A+FR+ +VRVRE+AE IAFYRGE+ E + + ++++ + R+ L++F N++ + T V+P +++A RYFAG++EFGV++Q + R Sbjct: 48 QRDFSTALSQKDQPAFWKAVSRFLGILVVATPLFAVYDYVQDLLALEWREWMTNLLVSNYFARRAFFDLKL------------------------------------------------------ENTLDNPDQRICDDVRNFVGGSVGLVVFTTNKILNSIAFTGVLWSVSPELVIFLLAYSIIGTLVALKIFGKKMVHLQYEALARQADFRYSMVRVRENAESIAFYRGEERELHSVSAFVRRMIAVLRHRIVWSRHLSLFGNAYEYATLVIPSVIIAPRYFAGQIEFGVVTQAGMAFR 294
BLAST of mRNA_L-elsbetiae_contig13188.2490.1 vs. uniprot
Match: K8EDS1_9CHLO (ABC transporter ATP-binding protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EDS1_9CHLO) HSP 1 Score: 191 bits (486), Expect = 1.850e-52 Identity = 110/295 (37.29%), Postives = 159/295 (53.90%), Query Frame = 1 Query: 4 QRDFSTAMSNKDQEGFYRGTRRYVTILLAAAPLFALSRFVQGKLGLDWRRWLTEHLCGLYFGNRAFYALKIGYLSPGKTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGITHAVKRIDNPDQRIGEDISTFTRNCIDVVVVFVGALLKVGSFVGVLLSISPRLTAFVVVYSALGTLSTTALFGARLKHLIFEGAKREANFRFGLVRVREHAEEIAFYRGEKGEKEGIKRLLEKVVSNIHLRLWCDAQLAVFSNSFMWLTAVLPYLVVAERYFAGEMEFGVISQ 888 QRD STA+SNKDQ+GFY +RY+ +++ AAPLFAL +V+ L WR+++TE + +Y + +Y+LK V +DNPDQRIGED+ F + + + V + + +F VL ISP+L F YS +GT TTA+FG +L HL FE K+EAN RF LVR+REHAE IA YRG K E + + R L++V+ ++ + L +F+N++ + T LPYL++A YF GE+EFGV++Q Sbjct: 67 QRDMSTALSNKDQDGFYNAIQRYIYVVVIAAPLFALYDYVKSLSALHWRKYMTEKMMTMYCEHDNYYSLKFNNSVIATANQNNEGSGDVQKEA-------------------------------TVTTLDNPDQRIGEDVRGFVHSMTTLTLAIVHKIFSMSAFFAVLYQISPKLLFFCFAYSMIGTYVTTAVFGGKLMHLHFEILKKEANMRFFLVRLREHAESIALYRGAKRELKTLLRTLQQVIKIQKEKIVWNRHLDLFTNAYEFATFCLPYLIIAPLYFKGEVEFGVVTQ 330
BLAST of mRNA_L-elsbetiae_contig13188.2490.1 vs. uniprot
Match: A0A1E5QTK5_9CHRO (ABC transporter ATP-binding protein n=1 Tax=Cyanobacterium sp. IPPAS B-1200 TaxID=1562720 RepID=A0A1E5QTK5_9CHRO) HSP 1 Score: 187 bits (475), Expect = 1.710e-51 Identity = 114/296 (38.51%), Postives = 162/296 (54.73%), Query Frame = 1 Query: 4 QRDFSTAMSNKDQEGFYRGTRRYVTILLAAAPLFALSRFVQGKLGLDWRRWLTEHLCGLYFGNRAFYALKIGYLSPGKTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGITHAVKRIDNPDQRIGEDISTFTRNCIDVVVVFVGALLKVGSFVGVLLSISPRLTAFVVVYSALGTLSTTALFGARLKHLIFEGAKREANFRFGLVRVREHAEEIAFYRGEKGEKEGIKRLLEKVVSNIH-LRLWCDAQLAVFSNSFMWLTAVLPYLVVAERYFAGEMEFGVISQ 888 Q + + ++ KD+ F+ R ++T+LL PLFA +VQ KLGL WR+WLTE+ G YF NR+FY L Y K IDNPDQRI EDI FT++ + ++V V ++L+V +F VL SIS +L F++VY+ GT+ TT +FG +L +L F K+EANFRFGLVRVRE++E IAFY+GEK E+ +K L V N + L +W + L +F N+F +L V+P +VVA +GE+E G +S+ Sbjct: 54 QGELISTLAAKDEAIFWSAVRSFLTVLLIYVPLFASFSYVQSKLGLYWRKWLTENFLGRYFANRSFYQLTAKY-----------------------------------------------------KEIDNPDQRISEDIRGFTQDSLLFLLVVVQSVLQVIAFSAVLWSISQQLVIFLLVYAIAGTIITTGVFGQKLINLNFAQLKKEANFRFGLVRVRENSESIAFYQGEKQEENHLKNLFNDVYQNFNSLIVWQELYLGLFVNTFEFLPYVIPAIVVAPSVLSGELEVGKVSE 296
BLAST of mRNA_L-elsbetiae_contig13188.2490.1 vs. uniprot
Match: A0A2K8WNI0_9CHRO (ABC-type transport system ATPase component YddA n=3 Tax=Cyanobacterium TaxID=102234 RepID=A0A2K8WNI0_9CHRO) HSP 1 Score: 186 bits (472), Expect = 4.650e-51 Identity = 113/296 (38.18%), Postives = 162/296 (54.73%), Query Frame = 1 Query: 4 QRDFSTAMSNKDQEGFYRGTRRYVTILLAAAPLFALSRFVQGKLGLDWRRWLTEHLCGLYFGNRAFYALKIGYLSPGKTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGITHAVKRIDNPDQRIGEDISTFTRNCIDVVVVFVGALLKVGSFVGVLLSISPRLTAFVVVYSALGTLSTTALFGARLKHLIFEGAKREANFRFGLVRVREHAEEIAFYRGEKGEKEGIKRLLEKVVSNIH-LRLWCDAQLAVFSNSFMWLTAVLPYLVVAERYFAGEMEFGVISQ 888 Q + + ++ KD+ F+ R ++T+L+ PLFA +VQ KLGL WR+WLTE+ G YF NR+FY L Y K IDNPDQRI EDI FT++ + ++V V ++L+V +F VL SIS +L F++VY+ GT+ TT +FG +L +L F K+EANFRFGLVRVRE++E IAFY+GEK E+ +K L V N + L +W + L +F N+F +L V+P +VVA +GE+E G +S+ Sbjct: 54 QGELISTLAAKDEALFWSAVRSFLTVLVIYVPLFASFSYVQSKLGLYWRKWLTENFLGRYFANRSFYQLTAKY-----------------------------------------------------KEIDNPDQRISEDIRGFTQDSLLFLLVVVQSVLQVIAFSAVLWSISQQLVIFLLVYAIAGTIITTGVFGQKLINLNFAQLKKEANFRFGLVRVRENSESIAFYQGEKQEENHLKNLFNDVYQNFNSLIVWQELYLGLFVNTFEFLPYVIPAIVVAPSVLSGELEVGKVSE 296
BLAST of mRNA_L-elsbetiae_contig13188.2490.1 vs. uniprot
Match: A0A813G6F7_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813G6F7_POLGL) HSP 1 Score: 187 bits (475), Expect = 8.480e-51 Identity = 116/301 (38.54%), Postives = 155/301 (51.50%), Query Frame = 1 Query: 4 QRDFSTAMSNKDQEGFYRGTRRYVTILLAAAPLFALSRFVQGKLGLDWRRWLTEHLCGLYFGNRAFYALKIGYLSPGKTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGITHAVKRIDNPDQRIGEDISTFTRNCIDVVVVFVGALLKVGSFVGVLLSISPRLTAFVVVYSALGTLSTTALFGARLKHLIFEGAKREANFRFGLVRVREHAEEIAFYRGEKGEKEGIKRLLEKVVSNIHLRLWCDAQLAVFSNSFMWLTAVLPYLVVAERYFAGEMEFGVISQVRLGAR 906 QR F+TA+SNKD GF+ G YV IL+ PLFAL+ FV+G+ W+ +L + L YF +R FY L + P T R +DNPDQR+ +DI T + ++ VG + + SF VL SISP L AF V+Y+A ++ T ALF RL+HLI +G ++A+ RF LVRVR+HAEEIAF G+ E I + + + + L +A L F N F ++T VLPY+ VA YFAGEMEFGVISQ R Sbjct: 74 QRSFTTALSNKDVPGFWAGITEYVYILVVCCPLFALTTFVEGRFATQWQVYLCQQLTDRYFSHRTFYTLTLQ--QPPSTRNQEEGQEAQVEKSPHSASN-------------------RSKDEAGRVEVDNPDQRLTDDIETVASQSVRLMTTVVGKVANIISFSYVLYSISPPLLAFAVMYAAGASVLTDALFTQRLQHLITKGISQDADLRFRLVRVRQHAEEIAFLGGDVAENRVISDIFRERIQTKNSELLLNAFLGTFQNYFSYMTVVLPYIAVAAHYFAGEMEFGVISQTATSFR 353
BLAST of mRNA_L-elsbetiae_contig13188.2490.1 vs. uniprot
Match: A0A846DS08_9CYAN (ABC transporter ATP-binding protein (Fragment) n=1 Tax=Moorena sp. SIO2B7 TaxID=2607823 RepID=A0A846DS08_9CYAN) HSP 1 Score: 173 bits (439), Expect = 1.440e-48 Identity = 101/293 (34.47%), Postives = 159/293 (54.27%), Query Frame = 1 Query: 19 TAMSNKDQEGFYRGTRRYVTILLAAAPLFALSRFVQGKLGLDWRRWLTEHLCGLYFGNRAFYALKIGYLSPGKTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGITHAVKRIDNPDQRIGEDISTFTRNCIDVVVVFVGALLKVGSFVGVLLSISPRLTAFVVVYSALGTLSTTALFGARLKHLIFEGAKREANFRFGLVRVREHAEEIAFYRGEKGEKEGIKRLLEKVVSNIHLRL-WCDAQLAVFSNSFMWLTAVLPYLVVAERYFAGEMEFGVISQVR 894 +A+S KD+ F+ ++ +L+ PLFA +++ KLGL WRRWLT H G YF NR+FY L G ++A IDNPDQRI EDI +F++ + +++ +G++L+V +F GVL IS L F+V+Y+ GT+ TT FG RL L F+ K+EANFRFGLVR+RE+AE IAFY+GE E + + +V N +L + W + L +F+N++ ++ ++P +++A F+G+ E G +++ + Sbjct: 58 SALSAKDEPRFWEAVGVFLGVLIVYVPLFAGYGYLRDKLGLFWRRWLTNHFLGQYFSNRSFYDL---------------------------------------------------GNSNA--EIDNPDQRISEDIRSFSQESLRFLLIIIGSILQVIAFSGVLWGISKPLVIFLVIYAFGGTIITTGFFGRRLVKLNFDQLKKEANFRFGLVRIRENAESIAFYQGENQESKRVSNRFTEVFRNFNLLIVWQELYLGLFTNTYEFMLYIIPAVILAPSVFSGDFEVGKVTEAQ 297
BLAST of mRNA_L-elsbetiae_contig13188.2490.1 vs. uniprot
Match: A0A8J4GS58_9CHLO (Uncharacterized protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4GS58_9CHLO) HSP 1 Score: 181 bits (458), Expect = 6.230e-48 Identity = 126/295 (42.71%), Postives = 172/295 (58.31%), Query Frame = 1 Query: 4 QRDFSTAMSNKDQEGFYRGTRRYVTILLAAAPLFALSRFVQGKLGLDWRRWLTEHLCGLYFGNRAFYALKIGYLSPGKTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGITHAVKRIDNPDQRIGEDISTFTRNCIDVVVVFVGALLKVGSFVGVLLSISPRLTAFVVVYSALGTLSTTALFGARLKHLIFEGAKREANFRFGLVRVREHAEEIAFYRGEKGEKEGIKRLLEKVVSNIHLRLWCDAQLAVFSNSFMWLTAVLPYLVVAERYFAGEMEFGVISQ 888 QRDFSTA+S KD GFY R++V I++ AAPLF+ + +V+ +L L WR +LT L YF NRAFY ++ G T XXXXXXXXXXXXX GGI DNPDQRI +D+ +F R+ + + + + +F GVL +S L F+ VY+A+GT TTA+FG L L + REA+ RF LVRVRE+AE IAFYRGE GE+ + L+ V++ R+ A ++++ + + T ++P L+ A RYFAGE+EFGVISQ Sbjct: 102 QRDFSTALSEKDVSGFYAAVRKFVVIIIIAAPLFSFNAWVEERLVLAWRAYLTRRLTRAYFANRAFYHIQ----QRGDTMAAGAIINPSSTAALTEAXXXXXXXXXXXXXSIGG-----GGI-------DNPDQRICDDVGSFVRSSVSLSLTVCRKIFSCVAFAGVLWGVSGSLVLFMFVYAAVGTFVTTAMFGRVLTSLFYRQLAREADLRFSLVRVRENAESIAFYRGEGGERVRVLSRLDAVLAVAADRIRWSALYDLWTSVYSYATILVPSLLTAPRYFAGEIEFGVISQ 380 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13188.2490.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13188.2490.1 >prot_L-elsbetiae_contig13188.2490.1 ID=prot_L-elsbetiae_contig13188.2490.1|Name=mRNA_L-elsbetiae_contig13188.2490.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=298bp MSNKDQEGFYRGTRRYVTILLAAAPLFALSRFVQGKLGLDWRRWLTEHLCback to top mRNA from alignment at L-elsbetiae_contig13188:298..3817- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13188.2490.1 ID=mRNA_L-elsbetiae_contig13188.2490.1|Name=mRNA_L-elsbetiae_contig13188.2490.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3520bp|location=Sequence derived from alignment at L-elsbetiae_contig13188:298..3817- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13188:298..3817- >mRNA_L-elsbetiae_contig13188.2490.1 ID=mRNA_L-elsbetiae_contig13188.2490.1|Name=mRNA_L-elsbetiae_contig13188.2490.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1788bp|location=Sequence derived from alignment at L-elsbetiae_contig13188:298..3817- (Laminarionema elsbetiae ELsaHSoW15)back to top |