prot_L-elsbetiae_contig12952.2339.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12952.2339.1
Unique Nameprot_L-elsbetiae_contig12952.2339.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length140
Homology
BLAST of mRNA_L-elsbetiae_contig12952.2339.1 vs. uniprot
Match: D8LQ11_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ11_ECTSI)

HSP 1 Score: 254 bits (649), Expect = 4.760e-81
Identity = 122/139 (87.77%), Postives = 132/139 (94.96%), Query Frame = 0
Query:    1 MACPQGTRGAVDLASFRCDPELSALLAAKGVWETLRARLAQAEDLEGFVAELTDVLEKVLRACPKQEPPPAEFYSRLVEEIDAVGWSHLASMDSLLTSVQLREKDAAGREHVFAVSLPSDYPHSPPICSVDLPTTLDLR 139
            MACPQG RG VDLASFRCDPELSALL A+GVW+TLRARLAQ ED+EGF+AELTDVLEKVLR+CPKQ+PPPAEFYSRLV EIDAVGWSHL SMDSLLTSVQLRE+DAAGREHVFA+SLPS+YPHSPPICSVDLPT L+LR
Sbjct:   30 MACPQGRRGIVDLASFRCDPELSALLEARGVWDTLRARLAQTEDVEGFMAELTDVLEKVLRSCPKQDPPPAEFYSRLVSEIDAVGWSHLVSMDSLLTSVQLRERDAAGREHVFAISLPSNYPHSPPICSVDLPTHLNLR 168          
BLAST of mRNA_L-elsbetiae_contig12952.2339.1 vs. uniprot
Match: A0A835YLD4_9STRA (WD-repeat region-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLD4_9STRA)

HSP 1 Score: 138 bits (348), Expect = 1.250e-36
Identity = 68/131 (51.91%), Postives = 84/131 (64.12%), Query Frame = 0
Query:    9 GAVDLASFRCDPELSALLAAKGVWETLRARLAQAEDLEGFVAELTDVLEKVLRACPKQEPPPAEFYSRLVEEIDAVGWSHLASMDSLLTSVQLREKDAAGREHVFAVSLPSDYPHSPPICSVDLPTTLDLR 139
            G VD  +F CD ELS +L + G    LR RLAQ  D   FVAEL DVL+++LRA P+  P PA +YSRLV EID VGW HL ++   L+ +QLR  DAAGR HV  V++P DYP + P C  DLP    L+
Sbjct:   49 GQVDAEAFACDAELSQILTSAGALPALRLRLAQTPDPASFVAELQDVLQRLLRAAPQSAPAPAAYYSRLVAEIDKVGWEHLVTISERLSHLQLRVSDAAGRHHVIGVTMPPDYPRTAPTCVADLPAPFALQ 179          
BLAST of mRNA_L-elsbetiae_contig12952.2339.1 vs. uniprot
Match: L8HG57_ACACA (Fanconi anemia, complementation group L family protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HG57_ACACA)

HSP 1 Score: 96.7 bits (239), Expect = 4.630e-21
Identity = 61/146 (41.78%), Postives = 74/146 (50.68%), Query Frame = 0
Query:    4 PQGTRGAVDLAS-FRCDPELSALLAAKGVWETLRARLAQAEDLEGFVAELTDVLEKVLRACPKQE---------PPPAEFYSRLVEEIDAVGWSHLASMDSLLTSVQLREKDAAGREHVFAVSLPSDYPHSPPICSVDLPTTLDLR 139
            P+GT    D A+  RC P L   LA       LR RLA++ D   F+ E+ DVL K                  P    FYSR+V EIDAVGWS L S +  LT + LR  D AGREH   V L  D+P + P+C+ DLP  L LR
Sbjct:   25 PRGTERMGDAAARVRCSPALRRRLAPHRA--ALRHRLAESNDAHSFLVEVADVLSKTTXXXXXXXXXVRSGGVPPRGGGFYSRVVAEIDAVGWSKLVSANDSLTRLSLRTTDEAGREHRLEVELMPDHPRTAPVCTTDLPQALALR 168          
BLAST of mRNA_L-elsbetiae_contig12952.2339.1 vs. uniprot
Match: A0A0M0K234_9EUKA (E3 ubiquitin-protein ligase fancl-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K234_9EUKA)

HSP 1 Score: 95.9 bits (237), Expect = 8.470e-21
Identity = 52/127 (40.94%), Postives = 77/127 (60.63%), Query Frame = 0
Query:   14 ASFRCDPELSALLAAKGVWETLRARLAQ-AEDLEGFVAELTDVLEKVLRACPKQEPPPAEFYSRLVEEIDAVGWSHLASMDSLLTSVQLREKDAAGREHVFAVSLPSDYPHSPPICSVDLPTTLDLR 139
            A F   P L  LL  +G  E +  RL + ++D+ GF+AEL +++E+++R  P    PPA FY  +V ++DAVGW+ + S+ + L  ++L   D AGR H   + LP+DYPHSPP   V LP+   LR
Sbjct:   38 ARFEACPRLRQLL--EGQSEAVDQRLRRNSDDVAGFLAELGELVERLVRVEPPAALPPAAFYELIVRDLDAVGWNLVQSVSAALDELELLVVDGAGRGHTLGLVLPADYPHSPPKTRVSLPSPFALR 162          
BLAST of mRNA_L-elsbetiae_contig12952.2339.1 vs. uniprot
Match: A0A6J2V969_CHACN (E3 ubiquitin-protein ligase FANCL n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2V969_CHACN)

HSP 1 Score: 92.0 bits (227), Expect = 2.410e-19
Identity = 49/126 (38.89%), Postives = 76/126 (60.32%), Query Frame = 0
Query:   14 ASFRCDPELSALLAAKGVWETLRARLAQAEDLEGFVAELTDVLEKVLRACPK-QEPPPAEFYSRLVEEIDAVGWSHLASMDSLLTSVQLREKDAAGREHVFAVSLPSDYPHSPPICSVDLPTTLDL 138
            A+F C  EL  LL  +G  + ++ RL Q+ DL  F+ EL  V E  L+  P+ Q  PP ++YSRL+ E++A+GW  L  +D+   +++L+ +D++GR+H   V L  +YP   P CS DLP  L +
Sbjct:   49 ATFHCCWELRRLL--RGYQQIVKQRLHQSPDLVSFILELKAVTEVALKHRPECQTIPPPQYYSRLITEMEALGWDKLLFIDTEFRTLKLKGEDSSGRQHAITVHLKPEYPAEAPECSADLPVPLTI 172          
BLAST of mRNA_L-elsbetiae_contig12952.2339.1 vs. uniprot
Match: UPI00188991F3 (E3 ubiquitin-protein ligase FANCL isoform X3 n=2 Tax=Pungitius pungitius TaxID=134920 RepID=UPI00188991F3)

HSP 1 Score: 90.9 bits (224), Expect = 5.660e-19
Identity = 48/126 (38.10%), Postives = 75/126 (59.52%), Query Frame = 0
Query:   14 ASFRCDPELSALLAAKGVWETLRARLAQAEDLEGFVAELTDVLEKVLRACPKQEP-PPAEFYSRLVEEIDAVGWSHLASMDSLLTSVQLREKDAAGREHVFAVSLPSDYPHSPPICSVDLPTTLDL 138
            A   C  +L  LL  +G    ++ RL Q+ DL  FV EL  VLE  L++CP++   PP ++Y+RL+ E++ +GW  L  +D+    ++L+ +D++GR+HV  V L + +P   P CS DLP  L L
Sbjct:   48 ARLHCCWQLKHLL--QGYEHIVKQRLQQSADLVTFVLELKTVLEVCLKSCPERRSIPPPQYYTRLISEMETLGWGRLLFIDTEFRMLRLKAEDSSGRQHVLTVKLRAKHPAEAPECSADLPVPLAL 171          
BLAST of mRNA_L-elsbetiae_contig12952.2339.1 vs. uniprot
Match: V9L8N8_CALMI (E3 ubiquitin-protein ligase FANCL-like protein (Fragment) n=1 Tax=Callorhinchus milii TaxID=7868 RepID=V9L8N8_CALMI)

HSP 1 Score: 89.7 bits (221), Expect = 6.420e-19
Identity = 45/121 (37.19%), Postives = 69/121 (57.02%), Query Frame = 0
Query:   14 ASFRCDPELSALLAAKGVWETLRARLAQAEDLEGFVAELTDVLEKVLR-ACPKQEPPPAEFYSRLVEEIDAVGWSHLASMDSLLTSVQLREKDAAGREHVFAVSLPSDYPHSPPICSVDLP 133
            A  +C  +L  +L  +G    ++ RL  + DL  F+ E   VLE  LR       PPP ++Y++L++EI+ +GW  LA MD    +++L+ +D+ GREH+ A+ L S YP  PP C  D P
Sbjct:   50 ARLQCSWQLKRVL--RGYQHVVKQRLQHSSDLVSFILEFKTVLEIALRNKLDLHAPPPPQYYTQLIKEIETLGWDKLAYMDPEFRTIKLKTEDSVGREHMIAIKLKSKYPAEPPDCLTDFP 168          
BLAST of mRNA_L-elsbetiae_contig12952.2339.1 vs. uniprot
Match: UPI00188946AC (E3 ubiquitin-protein ligase FANCL isoform X1 n=2 Tax=Pungitius pungitius TaxID=134920 RepID=UPI00188946AC)

HSP 1 Score: 90.9 bits (224), Expect = 7.380e-19
Identity = 48/126 (38.10%), Postives = 75/126 (59.52%), Query Frame = 0
Query:   14 ASFRCDPELSALLAAKGVWETLRARLAQAEDLEGFVAELTDVLEKVLRACPKQEP-PPAEFYSRLVEEIDAVGWSHLASMDSLLTSVQLREKDAAGREHVFAVSLPSDYPHSPPICSVDLPTTLDL 138
            A   C  +L  LL  +G    ++ RL Q+ DL  FV EL  VLE  L++CP++   PP ++Y+RL+ E++ +GW  L  +D+    ++L+ +D++GR+HV  V L + +P   P CS DLP  L L
Sbjct:   48 ARLHCCWQLKHLL--QGYEHIVKQRLQQSADLVTFVLELKTVLEVCLKSCPERRSIPPPQYYTRLISEMETLGWGRLLFIDTEFRMLRLKAEDSSGRQHVLTVKLRAKHPAEAPECSADLPVPLAL 171          
BLAST of mRNA_L-elsbetiae_contig12952.2339.1 vs. uniprot
Match: V9KWD5_CALMI (E3 ubiquitin-protein ligase FANCL (Fragment) n=3 Tax=Callorhinchus milii TaxID=7868 RepID=V9KWD5_CALMI)

HSP 1 Score: 89.7 bits (221), Expect = 1.310e-18
Identity = 45/121 (37.19%), Postives = 69/121 (57.02%), Query Frame = 0
Query:   14 ASFRCDPELSALLAAKGVWETLRARLAQAEDLEGFVAELTDVLEKVLR-ACPKQEPPPAEFYSRLVEEIDAVGWSHLASMDSLLTSVQLREKDAAGREHVFAVSLPSDYPHSPPICSVDLP 133
            A  +C  +L  +L  +G    ++ RL  + DL  F+ E   VLE  LR       PPP ++Y++L++EI+ +GW  LA MD    +++L+ +D+ GREH+ A+ L S YP  PP C  D P
Sbjct:   19 ARLQCSWQLKRVL--RGYQHVVKQRLQHSSDLVSFILEFKTVLEIALRNKLDLHAPPPPQYYTQLIKEIETLGWDKLAYMDPEFRTIKLKTEDSVGREHMIAIKLKSKYPAEPPDCLTDFP 137          
BLAST of mRNA_L-elsbetiae_contig12952.2339.1 vs. uniprot
Match: A0A2P6NXE8_9EUKA (E3 ubiquitin-protein ligase FANCL n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NXE8_9EUKA)

HSP 1 Score: 89.4 bits (220), Expect = 1.860e-18
Identity = 51/131 (38.93%), Postives = 79/131 (60.31%), Query Frame = 0
Query:    4 PQGTRGAVDLASFRCDPELSALLAAKGVWETLRARLAQAEDLEGFVAELTDVLEKVLRACPKQE-PPPAEFYSRLVEEIDAVGWSHLASMDSLLTSVQLREKDAAGREHVFAVSLPSDYPHSPPICSVDLP 133
            P G +   D A   C  ELS LL  KG+ +    RL Q+++L  F+ EL D+++ +L +  ++   PPAEFYSRL+ E+D +GW+ L  +D  LT++QL   D+  R H+  +++P +YP  PP  + DLP
Sbjct:   38 PNGPQNLKD-AELSCGEELSTLL--KGMEDK---RLNQSKNLTSFLMELKDLVQGLLISEEEKTFKPPAEFYSRLMMEMDTIGWNRLVHIDKTLTNIQLNTYDSRNRNHIVQLTIPKNYPSYPPQVTFDLP 162          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12952.2339.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ11_ECTSI4.760e-8187.77Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YLD4_9STRA1.250e-3651.91WD-repeat region-domain-containing protein n=1 Tax... [more]
L8HG57_ACACA4.630e-2141.78Fanconi anemia, complementation group L family pro... [more]
A0A0M0K234_9EUKA8.470e-2140.94E3 ubiquitin-protein ligase fancl-like protein n=1... [more]
A0A6J2V969_CHACN2.410e-1938.89E3 ubiquitin-protein ligase FANCL n=1 Tax=Chanos c... [more]
UPI00188991F35.660e-1938.10E3 ubiquitin-protein ligase FANCL isoform X3 n=2 T... [more]
V9L8N8_CALMI6.420e-1937.19E3 ubiquitin-protein ligase FANCL-like protein (Fr... [more]
UPI00188946AC7.380e-1938.10E3 ubiquitin-protein ligase FANCL isoform X1 n=2 T... [more]
V9KWD5_CALMI1.310e-1837.19E3 ubiquitin-protein ligase FANCL (Fragment) n=3 T... [more]
A0A2P6NXE8_9EUKA1.860e-1838.93E3 ubiquitin-protein ligase FANCL n=1 Tax=Planopro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 72..139
e-value: 9.8E-22
score: 79.0
IPR019162Fanconi anemia complex, subunit FancL, WD-repeat containing domainPFAMPF09765WD-3coord: 11..138
e-value: 2.5E-30
score: 105.8
IPR026848E3 ubiquitin-protein ligase FANCLPANTHERPTHR13206UBIQUITIN LIGASE PROTEIN PHF9 FANCONI ANEMIA GROUP L PROTEINcoord: 11..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12952contigL-elsbetiae_contig12952:935..4899 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12952.2339.1mRNA_L-elsbetiae_contig12952.2339.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12952 773..4921 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12952.2339.1 ID=prot_L-elsbetiae_contig12952.2339.1|Name=mRNA_L-elsbetiae_contig12952.2339.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=140bp
MACPQGTRGAVDLASFRCDPELSALLAAKGVWETLRARLAQAEDLEGFVA
ELTDVLEKVLRACPKQEPPPAEFYSRLVEEIDAVGWSHLASMDSLLTSVQ
LREKDAAGREHVFAVSLPSDYPHSPPICSVDLPTTLDLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR019162FancL_WD-rpt_cont_dom
IPR026848Fancl