prot_L-elsbetiae_contig12914.2317.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12914.2317.1
Unique Nameprot_L-elsbetiae_contig12914.2317.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length139
Homology
BLAST of mRNA_L-elsbetiae_contig12914.2317.1 vs. uniprot
Match: D8LDE8_ECTSI (RNA pseudouridylate synthase domain-containing protein (C-terminal) RNA pseudouridylate synthase dom n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE8_ECTSI)

HSP 1 Score: 180 bits (457), Expect = 5.420e-52
Identity = 88/99 (88.89%), Postives = 91/99 (91.92%), Query Frame = 0
Query:    1 MRSGCTIDGVRYRGMFVRVEGGGGKGREARNAWLTIECNEGKNRQIRKICKYLCLTVNRLNRIRYGPFSLGKFRAGGVAGVEIPKAFLRRLEEGTAGGS 99
            MRSGCTIDGVRY+GMFVRVEGGGGKGRE RNAWLTIEC EGKNRQIRKICKYLCLTVNRL R RYGPFSLGK RAGGVA VEIPKAF+RRLE+G  GGS
Sbjct:  282 MRSGCTIDGVRYKGMFVRVEGGGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVAAVEIPKAFMRRLEDG--GGS 378          
BLAST of mRNA_L-elsbetiae_contig12914.2317.1 vs. uniprot
Match: A0A6H5J790_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J790_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 6.470e-48
Identity = 83/113 (73.45%), Postives = 87/113 (76.99%), Query Frame = 0
Query:    1 MRSGCTIDGVRYRGMFVRVEGGGGKGREARNAWLTIECNEGKNRQIRKICKYLCLTVNRLNRIRYGPFSLGKFRAGGVAGVEIPKAFLRRLEEGTAGGSSRESGGGGVSGRRM 113
            MRSGCTIDGVRY+GMFVRVEGGGGKGRE RNAWLTIEC EGK      ICKYLCLTVNRL R  YGPFSLGK RAGGVA VEIPKAF+RRLE+G            G SGRR+
Sbjct:    1 MRSGCTIDGVRYKGMFVRVEGGGGKGREGRNAWLTIECTEGK------ICKYLCLTVNRLARTGYGPFSLGKVRAGGVAAVEIPKAFMRRLEDGGGSPGGAXXXXXGTSGRRL 107          
BLAST of mRNA_L-elsbetiae_contig12914.2317.1 vs. uniprot
Match: A0A2W5FQD0_9PROT (Pseudouridine synthase n=1 Tax=Micavibrio aeruginosavorus TaxID=349221 RepID=A0A2W5FQD0_9PROT)

HSP 1 Score: 79.3 bits (194), Expect = 3.300e-15
Identity = 42/90 (46.67%), Postives = 57/90 (63.33%), Query Frame = 0
Query:    1 MRSGCTIDGVRYRGMFVRVEGGGGKGREARNAWLTIECNEGKNRQIRKICKYLCLTVNRLNRIRYGPFSLGKFRAGGVAGVEIPKAFLRR 90
            +R G TIDG+RY  M VR+E    K + + N WL +   EGKNR+IRK+ + + LTVNRL R+ YGPF LGK   G +  +EI    +R+
Sbjct:  161 VRRGITIDGIRYGPMEVRLE----KEQTSANTWLIVSLTEGKNREIRKVLEAVGLTVNRLIRLSYGPFKLGKLGRGEI--IEIRPDMVRK 244          
BLAST of mRNA_L-elsbetiae_contig12914.2317.1 vs. uniprot
Match: A0A433JEJ1_9PROT (Pseudouridine synthase n=1 Tax=Azospirillum doebereinerae TaxID=92933 RepID=A0A433JEJ1_9PROT)

HSP 1 Score: 80.1 bits (196), Expect = 7.680e-15
Identity = 44/92 (47.83%), Postives = 56/92 (60.87%), Query Frame = 0
Query:    1 MRSGCTIDGVRY---RGMFVRVEGGGGKGREARNAWLTIECNEGKNRQIRKICKYLCLTVNRLNRIRYGPFSLGKFRAGGVAGVEIPKAFLR 89
            +  G TI+GV+Y     +  RV+G        RNAWLT+   EGKNR+IRK+ + L L VNRL R+ YGPF LGK   GGV   E+PK  +R
Sbjct:  165 LAKGPTIEGVKYGPIEALLDRVQG--------RNAWLTVSLKEGKNREIRKVMESLGLQVNRLIRVAYGPFQLGKLEEGGVE--EVPKRVVR 246          
BLAST of mRNA_L-elsbetiae_contig12914.2317.1 vs. uniprot
Match: A0A2U1VBY2_9PROT (Pseudouridine synthase n=2 Tax=Azospirillum sp. TSO35-2 TaxID=716796 RepID=A0A2U1VBY2_9PROT)

HSP 1 Score: 79.3 bits (194), Expect = 1.430e-14
Identity = 43/92 (46.74%), Postives = 55/92 (59.78%), Query Frame = 0
Query:    1 MRSGCTIDGVRY---RGMFVRVEGGGGKGREARNAWLTIECNEGKNRQIRKICKYLCLTVNRLNRIRYGPFSLGKFRAGGVAGVEIPKAFLR 89
            +R G TIDGV+Y     +  R++G        RNAWLT+   EGKNR+IRK+ +   L VNRL R+ YGPF LGK   G V   E+PK  +R
Sbjct:  146 LRKGPTIDGVKYGPIEAVLDRIQG--------RNAWLTVSLKEGKNREIRKVMEAFGLQVNRLIRVAYGPFQLGKLEEGAVE--EVPKRVVR 227          
BLAST of mRNA_L-elsbetiae_contig12914.2317.1 vs. uniprot
Match: A0A3M0C2Q2_9PROT (Pseudouridine synthase n=2 Tax=Eilatimonas milleporae TaxID=911205 RepID=A0A3M0C2Q2_9PROT)

HSP 1 Score: 78.6 bits (192), Expect = 1.440e-14
Identity = 40/89 (44.94%), Postives = 57/89 (64.04%), Query Frame = 0
Query:    1 MRSGCTIDGVRYRGMFVRVEGGGGKGREARNAWLTIECNEGKNRQIRKICKYLCLTVNRLNRIRYGPFSLGKFRAGGVAGVEIPKAFLR 89
            ++ G TIDG  Y  +   +E    +G    NAWLT+   EGKNR++R++ ++L L+VNRL R+ YGPFSLG   AGG A  ++P+  LR
Sbjct:  172 LKDGITIDGTHYGAIDAALETAQKQG--GANAWLTVAIREGKNREVRRVMEHLGLSVNRLIRVDYGPFSLGSLPAGGTA--QVPEKQLR 256          
BLAST of mRNA_L-elsbetiae_contig12914.2317.1 vs. uniprot
Match: A0A431VFR7_9PROT (Pseudouridine synthase n=1 Tax=Azospirillum griseum TaxID=2496639 RepID=A0A431VFR7_9PROT)

HSP 1 Score: 79.0 bits (193), Expect = 1.990e-14
Identity = 43/92 (46.74%), Postives = 55/92 (59.78%), Query Frame = 0
Query:    1 MRSGCTIDGVRY---RGMFVRVEGGGGKGREARNAWLTIECNEGKNRQIRKICKYLCLTVNRLNRIRYGPFSLGKFRAGGVAGVEIPKAFLR 89
            +  G TIDGV+Y     +  R++G        RNAWLT+   EGKNR+IRK+ + L L VNRL R+ YGPF LGK   G V   E+PK  +R
Sbjct:  165 LAKGPTIDGVKYGPIEAVLDRIQG--------RNAWLTVSLKEGKNREIRKVMESLGLVVNRLIRVAYGPFQLGKLEDGAVE--EVPKRIVR 246          
BLAST of mRNA_L-elsbetiae_contig12914.2317.1 vs. uniprot
Match: UPI001AE4FA8B (pseudouridine synthase n=1 Tax=Azospirillum soli TaxID=1304799 RepID=UPI001AE4FA8B)

HSP 1 Score: 78.2 bits (191), Expect = 2.950e-14
Identity = 42/92 (45.65%), Postives = 55/92 (59.78%), Query Frame = 0
Query:    1 MRSGCTIDGVRY---RGMFVRVEGGGGKGREARNAWLTIECNEGKNRQIRKICKYLCLTVNRLNRIRYGPFSLGKFRAGGVAGVEIPKAFLR 89
            +  G TIDG++Y     +  R++G        RNAWLT+   EGKNR+IRK+ + L L VNRL R+ YGPF LGK   G V   E+PK  +R
Sbjct:  165 LEKGPTIDGIKYGPIEAVLDRIQG--------RNAWLTVSLKEGKNREIRKVMEGLGLQVNRLIRVAYGPFQLGKLEEGAVE--EVPKRVVR 246          
BLAST of mRNA_L-elsbetiae_contig12914.2317.1 vs. uniprot
Match: A0A418W4N9_9PROT (Pseudouridine synthase n=1 Tax=Azospirillum cavernae TaxID=2320860 RepID=A0A418W4N9_9PROT)

HSP 1 Score: 78.2 bits (191), Expect = 3.870e-14
Identity = 42/92 (45.65%), Postives = 55/92 (59.78%), Query Frame = 0
Query:    1 MRSGCTIDGVRY---RGMFVRVEGGGGKGREARNAWLTIECNEGKNRQIRKICKYLCLTVNRLNRIRYGPFSLGKFRAGGVAGVEIPKAFLR 89
            +  G TIDGV+Y     +  R++G        RNAWLT+   EGKNR+IRK+ + + L VNRL R+ YGPF LGK    GV   E+PK  +R
Sbjct:  165 LAKGPTIDGVKYGPIEAVLDRIQG--------RNAWLTVALKEGKNREIRKVMEAMGLVVNRLIRVAYGPFQLGKLEESGVE--EVPKRIVR 246          
BLAST of mRNA_L-elsbetiae_contig12914.2317.1 vs. uniprot
Match: A0A2U9S5D5_9PROT (Pseudouridine synthase n=1 Tax=Azospirillum ramasamyi TaxID=682998 RepID=A0A2U9S5D5_9PROT)

HSP 1 Score: 77.8 bits (190), Expect = 4.680e-14
Identity = 43/92 (46.74%), Postives = 55/92 (59.78%), Query Frame = 0
Query:    1 MRSGCTIDGVRY---RGMFVRVEGGGGKGREARNAWLTIECNEGKNRQIRKICKYLCLTVNRLNRIRYGPFSLGKFRAGGVAGVEIPKAFLR 89
            +  G TI+GV+Y     +  RV+G        RNAWLT+   EGKNR+IRK+ + L L VNRL R+ YGPF LGK   G V   E+PK  +R
Sbjct:  165 LEKGPTIEGVKYGPIEAVLDRVQG--------RNAWLTVSLKEGKNREIRKVMESLGLQVNRLIRVAYGPFQLGKLEEGAVE--EVPKRVVR 246          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12914.2317.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDE8_ECTSI5.420e-5288.89RNA pseudouridylate synthase domain-containing pro... [more]
A0A6H5J790_9PHAE6.470e-4873.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2W5FQD0_9PROT3.300e-1546.67Pseudouridine synthase n=1 Tax=Micavibrio aerugino... [more]
A0A433JEJ1_9PROT7.680e-1547.83Pseudouridine synthase n=1 Tax=Azospirillum doeber... [more]
A0A2U1VBY2_9PROT1.430e-1446.74Pseudouridine synthase n=2 Tax=Azospirillum sp. TS... [more]
A0A3M0C2Q2_9PROT1.440e-1444.94Pseudouridine synthase n=2 Tax=Eilatimonas millepo... [more]
A0A431VFR7_9PROT1.990e-1446.74Pseudouridine synthase n=1 Tax=Azospirillum griseu... [more]
UPI001AE4FA8B2.950e-1445.65pseudouridine synthase n=1 Tax=Azospirillum soli T... [more]
A0A418W4N9_9PROT3.870e-1445.65Pseudouridine synthase n=1 Tax=Azospirillum cavern... [more]
A0A2U9S5D5_9PROT4.680e-1446.74Pseudouridine synthase n=1 Tax=Azospirillum ramasa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042092Pseudouridine synthase, RsuA/RluB/E/F, catalytic domainGENE3D3.30.70.1560coord: 1..71
e-value: 3.3E-11
score: 45.3
NoneNo IPR availablePANTHERPTHR21600RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 26..81
NoneNo IPR availablePANTHERPTHR21600:SF2RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 26..81
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 4..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12914contigL-elsbetiae_contig12914:320..4145 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12914.2317.1mRNA_L-elsbetiae_contig12914.2317.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12914 320..4169 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12914.2317.1 ID=prot_L-elsbetiae_contig12914.2317.1|Name=mRNA_L-elsbetiae_contig12914.2317.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=139bp
MRSGCTIDGVRYRGMFVRVEGGGGKGREARNAWLTIECNEGKNRQIRKIC
KYLCLTVNRLNRIRYGPFSLGKFRAGGVAGVEIPKAFLRRLEEGTAGGSS
RESGGGGVSGRRMARVEQGSAGMRRLAVCRRRSRGARL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042092PsdUridine_s_RsuA/RluB/E/F_cat
IPR020103PsdUridine_synth_cat_dom_sf