prot_L-elsbetiae_contig12880.2293.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12880.2293.1
Unique Nameprot_L-elsbetiae_contig12880.2293.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length192
Homology
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BLAST of mRNA_L-elsbetiae_contig12880.2293.1 vs. uniprot
Match: D8LKX3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKX3_ECTSI)

HSP 1 Score: 253 bits (645), Expect = 1.400e-82
Identity = 131/185 (70.81%), Postives = 151/185 (81.62%), Query Frame = 0 
Query:    2 FSADEGGRLPLLASVYLSAPLSLADLFGAITFMVKRAEVLRLDLQHEETHGGRPRPGPPSPIXXXXXXQSLTDSFRRLYDTFLLLALAFSVLEALMFRLGRRRIAANAERWRRSRGIGXXXXXXXXFLSTGALESLLDEEDVKRAGWEDWRGETVEQSLLMEQRYEQLRRTNIEKNEGLLEHTRG 186
            FSADEGGRLPLL +VYLSAPLSLADL   +TF+VKR+EVLRLDL+HE++ GGRP PGPPSP+      +S  DSFRRLYD FL +ALAFSVLEALMFRLG RRIAANAER RR++G G         +    +ESLLDEEDV+R GWEDWRG+TV+Q L+MEQRYEQLRR+N+EKNEGLLEHTRG
Sbjct:   39 FSADEGGRLPLLGAVYLSAPLSLADLIAGVTFIVKRSEVLRLDLEHEQSRGGRPHPGPPSPVPGGDDPESQADSFRRLYDAFLCMALAFSVLEALMFRLGSRRIAANAERHRRAQGFGES------LVYGSGMESLLDEEDVRRNGWEDWRGDTVQQGLMMEQRYEQLRRSNLEKNEGLLEHTRG 217
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12880.2293.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKX3_ECTSI1.400e-8270.81Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 102..191
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..81
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 82..101
NoneNo IPR availableTMHMMTMhelixcoord: 79..101
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12880contigL-elsbetiae_contig12880:104..2604 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12880.2293.1mRNA_L-elsbetiae_contig12880.2293.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12880 104..2604 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12880.2293.1 ID=prot_L-elsbetiae_contig12880.2293.1|Name=mRNA_L-elsbetiae_contig12880.2293.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=192bp
QFSADEGGRLPLLASVYLSAPLSLADLFGAITFMVKRAEVLRLDLQHEET
HGGRPRPGPPSPIPAPESPQSLTDSFRRLYDTFLLLALAFSVLEALMFRL
GRRRIAANAERWRRSRGIGGGGGGGGGFLSTGALESLLDEEDVKRAGWED
WRGETVEQSLLMEQRYEQLRRTNIEKNEGLLEHTRGGNNSL*
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