prot_L-elsbetiae_contig1287.2287.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1287.2287.1
Unique Nameprot_L-elsbetiae_contig1287.2287.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length107
Homology
BLAST of mRNA_L-elsbetiae_contig1287.2287.1 vs. uniprot
Match: A0A6H5KEH2_9PHAE (RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEH2_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 2.250e-28
Identity = 57/98 (58.16%), Postives = 69/98 (70.41%), Query Frame = 0
Query:    1 MLRSCTPLQLDCFVALWHLHNPQTPVDLYAQPHRPSSHLPRSDALRLFPIGFSFWKDFGGGRVLQGQVYDYYHRWWRVRYSDQDWEELTRSELELLVR 98
            M RS TPLQLDCFVALWHL+ PQ          +P + L R+ AL +FPIGF+F K+  GG +LQGQVYDY   +WRVRY+D +WEEL+R ELE L R
Sbjct: 1784 MRRSFTPLQLDCFVALWHLYFPQLANASAPDSVKPRTPLSRAQALHVFPIGFTFQKELAGGILLQGQVYDYVSPYWRVRYTDGNWEELSRRELERLAR 1881          
BLAST of mRNA_L-elsbetiae_contig1287.2287.1 vs. uniprot
Match: A0A6H5JMP6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP6_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 1.690e-26
Identity = 56/96 (58.33%), Postives = 69/96 (71.88%), Query Frame = 0
Query:    1 MLRSCTPLQLDCFVALWHLHNPQTPVDLYAQPHRPSSHLPRSDALRLFPIGFSFWKDFGGGRVLQGQVYDYYHRWWRVRYSDQDWEELTRSELELL 96
            MLRS TPLQLD FVALWHL++PQ   DL     +P + L R++AL+LFPI F+  K+  GG  LQGQV+D+   +WRV YSDQ+WEEL R ELE L
Sbjct:  778 MLRSFTPLQLDGFVALWHLYHPQQANDLPPVSVKPRAPLSRAEALKLFPIDFTLRKELDGGVNLQGQVFDFLQPYWRVGYSDQNWEELARRELERL 873          
BLAST of mRNA_L-elsbetiae_contig1287.2287.1 vs. uniprot
Match: A0A6H5KBF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBF4_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 5.460e-13
Identity = 36/71 (50.70%), Postives = 48/71 (67.61%), Query Frame = 0
Query:   27 DLYAQPHRPSSHLPRSDALRLFPIGFSFWKDFGGGRVLQGQVYDYYHRWWRVRYSDQDWEELTRSELELLV 97
            DLY  P      L R  ++++   GF+  KDFGGG+ LQGQV+ +  R+WRVRYS+Q+WEELTR ELE  +
Sbjct: 1056 DLYTGPWTVEEVLQRGLSVQVKMQGFTSQKDFGGGQKLQGQVFGHRDRYWRVRYSNQNWEELTRQELERCL 1126          
BLAST of mRNA_L-elsbetiae_contig1287.2287.1 vs. uniprot
Match: A0A6H5K3V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3V4_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 1.260e-6
Identity = 38/103 (36.89%), Postives = 54/103 (52.43%), Query Frame = 0
Query:    4 SCTPLQLDCFVALWHLHN-----PQTPVDLYAQPHRPSSHLPRSDALRLFPIGFSFWKDF----GGGRVLQGQVYDYYHRWWRVRYSDQDWEELTRSELELLV 97
            S +PLQL  F AL   ++     P+ P  L    H  ++   R  AL+ FP+     ++     G   V +G+V D+Y  +WRV++SD DWEELTR EL   V
Sbjct: 2134 SFSPLQLGIFHALCEDYHGTDVAPRPPGALSRGEHEVAT---REAALKEFPLDTEVARELLDSDGNVVVSRGKVCDFYDPYWRVKFSDDDWEELTRRELRQGV 2233          
BLAST of mRNA_L-elsbetiae_contig1287.2287.1 vs. uniprot
Match: A0A6H5KNP4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNP4_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 5.910e-6
Identity = 38/96 (39.58%), Postives = 48/96 (50.00%), Query Frame = 0
Query:    4 SCTPLQLDCFVALWH-LHNPQTPVDLYAQPHRPSSHLP-RSDALRLFPIGFSFWK---DFGGGRVL-QGQVYDYYHRWWRVRYSDQDWEELTRSEL 93
            S +PLQLD F ALW   H           P R    +  R  AL+ FP+     K   D     +L +G+V D+Y  +WRV +SD DWEE TR EL
Sbjct: 1589 SFSPLQLDVFHALWEDYHGSDVAPRPPGAPTRGEREVATREAALQEFPLNTEVAKELRDKDDNIILSRGKVCDFYDPYWRVEFSDGDWEEFTRREL 1684          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1287.2287.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KEH2_9PHAE2.250e-2858.16RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp.... [more]
A0A6H5JMP6_9PHAE1.690e-2658.33Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KBF4_9PHAE5.460e-1350.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3V4_9PHAE1.260e-636.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNP4_9PHAE5.910e-639.58Integrase catalytic domain-containing protein n=1 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1287contigL-elsbetiae_contig1287:16760..17080 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1287.2287.1mRNA_L-elsbetiae_contig1287.2287.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1287 16760..17522 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1287.2287.1 ID=prot_L-elsbetiae_contig1287.2287.1|Name=mRNA_L-elsbetiae_contig1287.2287.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=107bp
MLRSCTPLQLDCFVALWHLHNPQTPVDLYAQPHRPSSHLPRSDALRLFPI
GFSFWKDFGGGRVLQGQVYDYYHRWWRVRYSDQDWEELTRSELELLVRRG
RPSGVE*
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