prot_L-elsbetiae_contig12843.2278.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12843.2278.1
Unique Nameprot_L-elsbetiae_contig12843.2278.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length267
Homology
BLAST of mRNA_L-elsbetiae_contig12843.2278.1 vs. uniprot
Match: D7G0L3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0L3_ECTSI)

HSP 1 Score: 337 bits (864), Expect = 2.160e-110
Identity = 186/277 (67.15%), Postives = 207/277 (74.73%), Query Frame = 0
Query:    1 VHICKAETLPGVLSDFWNLASEMAQEKYSAMAGDREYAGHALFVVARCDLLRDYGMMRHLDKVLDFCSGGCSDFGRTVTLQHYHPDFVLPPSQTRSAD-----DPNSKGLARFINFSRSPYPIFGLTASSGSPVRPSPLELRSDKIARLRLDLELVYNSVAGRSTDDNVDSHGSPHGTIPSSPEEIQDNTLDWLFSLPSSSAPGGTTARSLGEGTDLEQG--GQEGXXXXXXXXXXXESKEGGQSAFATHGTSS---LTSSYEGGLVTSGVNTPEKV 267
            VHICKAETLP VLS+FW+LAS MAQEKYSAMAGDR+YA HALFV  RC LL+DY MMRHLDKVLDFCSGGCSDFGRTVTLQHYHPDFVLPPSQTRS+      D N+KGL+RF+NFSR+PYP FGLTA++GS VR  P+E ++DKI  LRLDLELVYNSVAGRSTDD VDSHGSPHGTIPSSPEE+QD  LDWL+SLP    P     +   EG+  E+G  G E         XXX                    LTSSYEGGLVTSG+N+PEKV
Sbjct:  149 VHICKAETLPEVLSEFWSLASMMAQEKYSAMAGDRDYAAHALFVAPRCALLKDYAMMRHLDKVLDFCSGGCSDFGRTVTLQHYHPDFVLPPSQTRSSSXXXXVDDNNKGLSRFVNFSRAPYPTFGLTAAAGSLVRSEPIE-KTDKIGHLRLDLELVYNSVAGRSTDDCVDSHGSPHGTIPSSPEEVQDKALDWLYSLP----PALQAGQEGAEGSVEERGAAGDEAVSTAAIVNXXXXXXXXXXXXXXXXXXXXXXXLTSSYEGGLVTSGLNSPEKV 420          
BLAST of mRNA_L-elsbetiae_contig12843.2278.1 vs. uniprot
Match: A0A6H5JGJ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGJ1_9PHAE)

HSP 1 Score: 295 bits (756), Expect = 2.220e-92
Identity = 179/307 (58.31%), Postives = 203/307 (66.12%), Query Frame = 0
Query:    1 VHICKAETLPGVLSDFWNLASEMAQEKYSAMAGDREYAGHALFVVARCDLLRDYGMMRHLD--------------------------------KVLDFCSGGCSDFGRTVTLQHYHPDFVLPPSQTRSAD-----DPNSKGLARFINFSRSPYPIFGLTASSGSPVRPSPLELRSDKIARLRLDLELVYNSVAGRSTDDNVDSHGSPHGTIPSSPEEIQDNTLDWLFSLPSSSAPGGTTARSLGEGTDLEQGGQEGXXXXXXXXXXXESKEGGQSAFATHGTSS---LTSSYEGGLVTSGVNTPEKV 267
            VHICKAETLP VLS+FW+LA+ MAQEKYSAMAGD +YA HALFV  RC LL++Y MMRHLD                                KVLDFCSGGCSDFGRTVTLQHYHPDFVLPPSQTRS+      D N+KGL+RF+NFSR+PYP FGLTA++GS VR  P+E ++DKI  LRLDLELVYNSVAGRSTDD VDS G   G IPSS EE+QD TLDWL+SLP +   G   A  +G   +    G E     XXXXXXX                    LTSSYEGGLVTSG+N+PEK+
Sbjct:  137 VHICKAETLPEVLSEFWSLAAMMAQEKYSAMAGDHDYAAHALFVAPRCALLKNYAMMRHLDPSLSEEIGTCFFIASSPEGLKAKTSRFVFARDKVLDFCSGGCSDFGRTVTLQHYHPDFVLPPSQTRSSSXXXXVDDNNKGLSRFVNFSRAPYPTFGLTAAAGSLVRSEPIE-KTDKIGHLRLDLELVYNSVAGRSTDDCVDSGGGGRGGIPSSLEEVQDKTLDWLYSLPPALRAGQEGA--VGGVEERGAAGDEAVSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTSSYEGGLVTSGLNSPEKL 440          
BLAST of mRNA_L-elsbetiae_contig12843.2278.1 vs. uniprot
Match: A0A7S2Y042_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y042_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.800e-6
Identity = 42/171 (24.56%), Postives = 76/171 (44.44%), Query Frame = 0
Query:    1 VHICKAETLPGVLSDFWNLASEMAQ--EKYSAMAGDREYAGHALFVVARCDLLRDYGMMRHLDKVLDFCSGGCSDFGRTVTLQHYHPDFVLPPSQTRSADDPNSKGLARFINFSRSPYPIFGLTASSGSPVRPSPLELRSD-------KIARLRLDLELVYNSVAGRSTDD 162
            V++  +ET+PGVL+DFW +AS   Q  +++ A AG++++     FV+ +   L D   M  L K +        DFG  + + H+HP      +Q                  S+SP+P   +T  + S  + + +   +        +I + R  +E +++  A  S  D
Sbjct:    7 VYVTASETIPGVLADFWRVASYGTQLVQRHEA-AGNKKFFKRIAFVIPQSKTLEDISSMHQLHKQIQIFKECADDFGLRMFVSHHHPKLYSTGNQAEL--------------LSQSPFPTLMITLKATSAQQFTTISKSAQNNQPDQSRIVQARAKIERLFSKPAAPSPTD 162          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12843.2278.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G0L3_ECTSI2.160e-11067.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JGJ1_9PHAE2.220e-9258.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2Y042_9STRA1.800e-624.56Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12843contigL-elsbetiae_contig12843:154..3365 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12843.2278.1mRNA_L-elsbetiae_contig12843.2278.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12843 154..3365 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12843.2278.1 ID=prot_L-elsbetiae_contig12843.2278.1|Name=mRNA_L-elsbetiae_contig12843.2278.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=267bp
VHICKAETLPGVLSDFWNLASEMAQEKYSAMAGDREYAGHALFVVARCDL
LRDYGMMRHLDKVLDFCSGGCSDFGRTVTLQHYHPDFVLPPSQTRSADDP
NSKGLARFINFSRSPYPIFGLTASSGSPVRPSPLELRSDKIARLRLDLEL
VYNSVAGRSTDDNVDSHGSPHGTIPSSPEEIQDNTLDWLFSLPSSSAPGG
TTARSLGEGTDLEQGGQEGGGGGGGASAGEESKEGGQSAFATHGTSSLTS
SYEGGLVTSGVNTPEKV
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