prot_L-elsbetiae_contig1281.2260.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1281.2260.1
Unique Nameprot_L-elsbetiae_contig1281.2260.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length349
Homology
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BLAST of mRNA_L-elsbetiae_contig1281.2260.1 vs. uniprot
Match: D7FPP5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPP5_ECTSI)

HSP 1 Score: 522 bits (1345), Expect = 6.180e-184
Identity = 261/349 (74.79%), Postives = 303/349 (86.82%), Query Frame = 0 
Query:    1 MRRLVDTPEAWETLDLRADVIGRRTMKSGRQSIMSRQPLFFLARSVVQQPRFSLLKTADCQGLNLGAMGSTPDLLLTLFDSCKHITTLNLRETYVEDEMLPQPDSAVEKVIAQHLPGLQNLALDIDASNQGLKVLLQGCTGLKSLHIGSRCNRRGDSISMYPNDLGMKVFTTIGAPCLETLSLVDKINIGAAGLRCLLDASACPRLKTLILVRTGRVNGHCLKAISSSMGRLSSLTLDQCPITPSAVMFLLEKCPELTNLVVSTQHGLVDNPRDGRPLLEFLLAQGPSKRSKIAIQHVAQRGAPPG-LPRWLMEDLTLCTAVAA--DKCIVIGPANTAEERIAPFIAGR 346
            M RL+DTP+AWETLDLRA VIGRRTMKSGRQSI+SRQPLFFLARSVVQQPRFSLLKT D QGLNLGAMGSTPDLL+TLF+SC+HITTLNL +TYVEDE LPQP  +VE VIAQHLPG+ +LAL++DASN+GL+VLL+GCT LKSLHIGSR N+ GDSISMYPNDLGMK FT +GAP LETL+LVDK+NIGAAGLRCLL+ SACPRL+TL LVRTGRVN HCLKAI+ +MGRL+SLTLDQCP+ PS V F+L+KCPELT++VVSTQHGL+  P+DGR LLE+LLAQGPS+ SKI +Q ++ RG+  G +P WL++D  LC  V       IVIGPA TA+ERIAPF+AGR
Sbjct:   33 MHRLLDTPDAWETLDLRAHVIGRRTMKSGRQSILSRQPLFFLARSVVQQPRFSLLKTVDMQGLNLGAMGSTPDLLVTLFESCRHITTLNLWKTYVEDERLPQPQFSVETVIAQHLPGVHHLALEVDASNRGLRVLLEGCTRLKSLHIGSRSNQAGDSISMYPNDLGMKAFTAVGAPYLETLTLVDKVNIGAAGLRCLLNPSACPRLRTLTLVRTGRVNDHCLKAIAPAMGRLTSLTLDQCPVKPSTVQFILDKCPELTSMVVSTQHGLLQQPQDGRALLEYLLAQGPSRLSKIEVQRLSARGSVLGNVPYWLVQDPGLCATVLEWISPRIVIGPAETADERIAPFMAGR 381
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BLAST of mRNA_L-elsbetiae_contig1281.2260.1 vs. uniprot
Match: A0A6H5LCS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCS2_9PHAE)

HSP 1 Score: 516 bits (1328), Expect = 4.330e-178
Identity = 258/349 (73.93%), Postives = 299/349 (85.67%), Query Frame = 0 
Query:    1 MRRLVDTPEAWETLDLRADVIGRRTMKSGRQSIMSRQPLFFLARSVVQQPRFSLLKTADCQGLNLGAMGSTPDLLLTLFDSCKHITTLNLRETYVEDEMLPQPDSAVEKVIAQHLPGLQNLALDIDASNQGLKVLLQGCTGLKSLHIGSRCNRRGDSISMYPNDLGMKVFTTIGAPCLETLSLVDKINIGAAGLRCLLDASACPRLKTLILVRTGRVNGHCLKAISSSMGRLSSLTLDQCPITPSAVMFLLEKCPELTNLVVSTQHGLVDNPRDGRPLLEFLLAQGPSKRSKIAIQHVAQRGAPPG-LPRWLMEDLTLCTAVAA--DKCIVIGPANTAEERIAPFIAGR 346
            MRRL+D+P+AWETLDLRA +IGRRTMKSGRQSI+SRQPLFFLARSVVQQPRFSLLKT D QGLNLGAMGSTPDLL+TLF+SC+HITTLNL +TYVEDE LPQP  +VE VIAQHLPG+++LAL++D SN+GLKVLL+GCT LKSLHIGSR NR GDSISMYPNDLGMK FTT+GAP LETL+LVDK NIGAAGLRCLLD SACPRL+ L LVRTGRVN HCLKAI+ +MGRL+SLTLDQC + PS V F+L+KCPELT++VVSTQHGL+  P+ GR LLE+LLAQGPSK SKI +Q ++ RG+  G +P WL++D  LC  V       IV+GPA T +ERIAPF+ GR
Sbjct:  251 MRRLLDSPDAWETLDLRAHIIGRRTMKSGRQSILSRQPLFFLARSVVQQPRFSLLKTVDMQGLNLGAMGSTPDLLVTLFESCRHITTLNLWKTYVEDERLPQPQFSVETVIAQHLPGVRHLALEVDDSNRGLKVLLEGCTRLKSLHIGSRSNRAGDSISMYPNDLGMKAFTTVGAPYLETLTLVDKFNIGAAGLRCLLDPSACPRLRKLTLVRTGRVNNHCLKAIAPAMGRLTSLTLDQCLVDPSTVQFILDKCPELTSIVVSTQHGLLQQPQGGRALLEYLLAQGPSKLSKIEVQRLSARGSVLGNVPHWLVQDPGLCATVLGWNSPRIVLGPAETVDERIAPFMVGR 599
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1281.2260.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FPP5_ECTSI6.180e-18474.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LCS2_9PHAE4.330e-17873.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..273
e-value: 1.1E-25
score: 92.2
NoneNo IPR availablePANTHERPTHR38926FAMILY NOT NAMEDcoord: 65..153
coord: 176..263
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 61..268

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1281contigL-elsbetiae_contig1281:8986..11830 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1281.2260.1mRNA_L-elsbetiae_contig1281.2260.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1281 8428..12726 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1281.2260.1 ID=prot_L-elsbetiae_contig1281.2260.1|Name=mRNA_L-elsbetiae_contig1281.2260.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=349bp
MRRLVDTPEAWETLDLRADVIGRRTMKSGRQSIMSRQPLFFLARSVVQQP
RFSLLKTADCQGLNLGAMGSTPDLLLTLFDSCKHITTLNLRETYVEDEML
PQPDSAVEKVIAQHLPGLQNLALDIDASNQGLKVLLQGCTGLKSLHIGSR
CNRRGDSISMYPNDLGMKVFTTIGAPCLETLSLVDKINIGAAGLRCLLDA
SACPRLKTLILVRTGRVNGHCLKAISSSMGRLSSLTLDQCPITPSAVMFL
LEKCPELTNLVVSTQHGLVDNPRDGRPLLEFLLAQGPSKRSKIAIQHVAQ
RGAPPGLPRWLMEDLTLCTAVAADKCIVIGPANTAEERIAPFIAGRHV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf