prot_L-elsbetiae_contig1281.2259.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1281.2259.1
Unique Nameprot_L-elsbetiae_contig1281.2259.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length230
Homology
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BLAST of mRNA_L-elsbetiae_contig1281.2259.1 vs. uniprot
Match: A0A6H5LCS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCS2_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 4.140e-9
Identity = 61/176 (34.66%), Postives = 87/176 (49.43%), Query Frame = 0 
Query:    4 ENETIGAARGRRNQRLERRDRT-GDRRSTTAFSNSGAVEELGRGVRRT-----RNQSRLSWQPSGGSVNSAAAAAIPSRGGPQGRAKNG----------------AASAASAPISHSTRKPRENRAPKKVPGIFGIPVGWNAEDFDYDDSEDETYTPTLSRSSLPTGGAGAPSTRC 157
            E+ET+GA+R RRN   E R RT G +   +A ++S A    GR  R +     RN +R              + A+ ++ G QGR ++G                + S        +  + ++ ++ +KVPGIFGIPV WN ED DYDDSEDE+YT     S  PT GA A + +C
Sbjct:   19 EDETVGASRRRRN---ETRTRTRGPQGGASANNSSAANGRSGRAARFSAARLPRNAARXXXXXXXXXXXXXXSGAVTTKEG-QGRCQSGXXXXXXXXXXXXXXXXSRSENDDGTPEAGERCKKRKSTRKVPGIFGIPVAWNVEDCDYDDSEDESYTQQSGGSGPPTVGATAFAAKC 190
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1281.2259.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LCS2_9PHAE4.140e-934.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1281contigL-elsbetiae_contig1281:7611..8300 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1281.2259.1mRNA_L-elsbetiae_contig1281.2259.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1281 7611..8300 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1281.2259.1 ID=prot_L-elsbetiae_contig1281.2259.1|Name=mRNA_L-elsbetiae_contig1281.2259.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=230bp
MFPENETIGAARGRRNQRLERRDRTGDRRSTTAFSNSGAVEELGRGVRRT
RNQSRLSWQPSGGSVNSAAAAAIPSRGGPQGRAKNGAASAASAPISHSTR
KPRENRAPKKVPGIFGIPVGWNAEDFDYDDSEDETYTPTLSRSSLPTGGA
GAPSTRCRSQPTTKYRTKCTHSRRLLSPPLTQHSGNPRGTLSACCCCCTA
PLEDQLLTPFMTLHPFRAVVFVLLCSSRNL
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