prot_L-elsbetiae_contig128.2249.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig128.2249.1
Unique Nameprot_L-elsbetiae_contig128.2249.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length209
Homology
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BLAST of mRNA_L-elsbetiae_contig128.2249.1 vs. uniprot
Match: D8LB94_ECTSI (Similar to AHNAK nucleoprotein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB94_ECTSI)

HSP 1 Score: 62.8 bits (151), Expect = 6.880e-8
Identity = 29/40 (72.50%), Postives = 34/40 (85.00%), Query Frame = 0 
Query:   82 EVKKPKKGLFGSIFGGSKGKIEVPDTDVPGDMSVPDVSGS 121
            +V+KPKKGLFG +FG SKGKIEVPD DV  D S+P+VSGS
Sbjct:  846 DVQKPKKGLFGGLFGSSKGKIEVPDADVSADASLPNVSGS 885
[Close]
BLAST of mRNA_L-elsbetiae_contig128.2249.1 vs. uniprot
Match: A0A6H5K9M1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M1_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 1.030e-6
Identity = 29/40 (72.50%), Postives = 32/40 (80.00%), Query Frame = 0 
Query:   82 EVKKPKKGLFGSIFGGSKGKIEVPDTDVPGDMSVPDVSGS 121
            +V+KPKKGLFGSIFG SK  IEVPD DV  D S+P VSGS
Sbjct:  724 DVQKPKKGLFGSIFGSSKTNIEVPDADVSADASLPGVSGS 763
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig128.2249.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LB94_ECTSI6.880e-872.50Similar to AHNAK nucleoprotein n=1 Tax=Ectocarpus ... [more]
A0A6H5K9M1_9PHAE1.030e-672.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23348PERIAXIN/AHNAKcoord: 2..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig128contigL-elsbetiae_contig128:54065..55179 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig128.2249.1mRNA_L-elsbetiae_contig128.2249.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig128 54065..55180 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig128.2249.1 ID=prot_L-elsbetiae_contig128.2249.1|Name=mRNA_L-elsbetiae_contig128.2249.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=209bp
AGDVSVPSVDATLPTASVDMPSADVSGDLKGPDAPSVKMGEVDVPSVDAS
VDVPSVSGDVSLPSASVDVPSVDASVDVPSAEVKKPKKGLFGSIFGGSKG
KIEVPDTDVPGDMSVPDVSGSVPDVSASAPSVGGDVSVPSGSVDVPSVEM
SGDMPSTSVDIDMPSGSVDAPSVSVPAVEGKVPSVDLSGKAPEVPSVDCD
ISGDLPSAD
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