mRNA_L-elsbetiae_contig10.21.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10.21.1 vs. uniprot
Match: D1J794_ECTSI (ATP synthase subunit b, chloroplastic n=8 Tax=Ectocarpales TaxID=2877 RepID=D1J794_ECTSI) HSP 1 Score: 266 bits (681), Expect = 1.380e-89 Identity = 142/157 (90.45%), Postives = 152/157 (96.82%), Query Frame = 1 Query: 1 MFDNYSSVLIIGTEKTGGLFDFDGTLPVIALQFVIFMFVLNFILYTPLLDTIDERNIYISKSLSEATSILAKSNELNLKYEKKTSKARKAVALDLLTYQKLYKDILEEKMKSSEVFIDKFLTETTKNFEDNKETILKSFDTEIDSLSNQIMKKIMSS 471 MFDNY+S+LIIGTEKTGGLFDFDGTLPVIALQF+IFMF+LNFILYTPLLDTIDERNIYISKSLSEAT IL KSNELNLKYEKKTSKARKAVALDLLTYQ+LYK+ILEEKMKSSE FIDKFLTETTKNFE+NKE ILKSFDTEIDSLSN+IMKK++ S Sbjct: 1 MFDNYNSILIIGTEKTGGLFDFDGTLPVIALQFIIFMFLLNFILYTPLLDTIDERNIYISKSLSEATRILTKSNELNLKYEKKTSKARKAVALDLLTYQQLYKNILEEKMKSSEDFIDKFLTETTKNFEENKENILKSFDTEIDSLSNEIMKKMIKS 157
BLAST of mRNA_L-elsbetiae_contig10.21.1 vs. uniprot
Match: A0A1I9LVV6_9PHAE (ATP synthase subunit b, chloroplastic n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVV6_9PHAE) HSP 1 Score: 248 bits (633), Expect = 2.860e-82 Identity = 132/156 (84.62%), Postives = 145/156 (92.95%), Query Frame = 1 Query: 1 MFDNYSSVLIIGTEKTGGLFDFDGTLPVIALQFVIFMFVLNFILYTPLLDTIDERNIYISKSLSEATSILAKSNELNLKYEKKTSKARKAVALDLLTYQKLYKDILEEKMKSSEVFIDKFLTETTKNFEDNKETILKSFDTEIDSLSNQIMKKIMS 468 MFDNY+ +LII TEKTGGLFDFDGTLPVIA+QF+IFMF+LNFILYTPLLDTIDERNIYISKSLSEAT+IL K+N+LN+KYEKKTSKARKAVALDLL YQKLYKDILEEKMKSSE IDKFL ETTKNFE+NK ILKSFDTEI SLS QIMKK+++ Sbjct: 1 MFDNYNYILIISTEKTGGLFDFDGTLPVIAIQFIIFMFILNFILYTPLLDTIDERNIYISKSLSEATNILTKANKLNIKYEKKTSKARKAVALDLLIYQKLYKDILEEKMKSSESVIDKFLIETTKNFEENKGNILKSFDTEIYSLSKQIMKKLIT 156
BLAST of mRNA_L-elsbetiae_contig10.21.1 vs. uniprot
Match: A0A0S0GJT6_COSCS (ATP synthase CF0 B' chain subunit II n=27 Tax=Laminariales TaxID=2886 RepID=A0A0S0GJT6_COSCS) HSP 1 Score: 245 bits (625), Expect = 4.570e-81 Identity = 127/156 (81.41%), Postives = 145/156 (92.95%), Query Frame = 1 Query: 1 MFDNYSSVLIIGTEKTGGLFDFDGTLPVIALQFVIFMFVLNFILYTPLLDTIDERNIYISKSLSEATSILAKSNELNLKYEKKTSKARKAVALDLLTYQKLYKDILEEKMKSSEVFIDKFLTETTKNFEDNKETILKSFDTEIDSLSNQIMKKIMS 468 MF NY+S+LIIGTEKTGGLFDFDGTLP+IALQFVIFMF+LNFILYTPLLDTIDERN+YI KSL EATS+L KSN+LN+KYE KTSKARKA LDLLTYQKLYKDILEEKMKSS++FIDKFL ETT+NFE+NK++IL SFD EIDSLS+QIM K+++ Sbjct: 1 MFYNYNSILIIGTEKTGGLFDFDGTLPIIALQFVIFMFILNFILYTPLLDTIDERNLYIKKSLDEATSVLTKSNQLNVKYEAKTSKARKAAKLDLLTYQKLYKDILEEKMKSSQLFIDKFLIETTENFENNKDSILTSFDNEIDSLSSQIMTKLLT 156
BLAST of mRNA_L-elsbetiae_contig10.21.1 vs. uniprot
Match: A0A8F0F9X4_9PHAE (CF0 subunit II n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9X4_9PHAE) HSP 1 Score: 240 bits (612), Expect = 4.370e-79 Identity = 124/156 (79.49%), Postives = 140/156 (89.74%), Query Frame = 1 Query: 1 MFDNYSSVLIIGTEKTGGLFDFDGTLPVIALQFVIFMFVLNFILYTPLLDTIDERNIYISKSLSEATSILAKSNELNLKYEKKTSKARKAVALDLLTYQKLYKDILEEKMKSSEVFIDKFLTETTKNFEDNKETILKSFDTEIDSLSNQIMKKIMS 468 MF NY+S+LIIGTEKTGGLFDFDGTLPVI QFV+FMF+LNF+LYTPLLDTIDERN YI KSL +ATS+L KSNELN KYEKKTSKARKA +D+L YQKLYKDILEEKMKSS++FIDKFL ETT+NFE+NK+ IL SFD EIDSLSNQIM KI++ Sbjct: 1 MFHNYNSILIIGTEKTGGLFDFDGTLPVIVFQFVLFMFILNFVLYTPLLDTIDERNSYIKKSLDKATSVLIKSNELNKKYEKKTSKARKAAKMDILIYQKLYKDILEEKMKSSQIFIDKFLVETTENFENNKDNILTSFDNEIDSLSNQIMTKIVT 156
BLAST of mRNA_L-elsbetiae_contig10.21.1 vs. uniprot
Match: A0A8F0FAP4_9PHAE (CF0 subunit II n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAP4_9PHAE) HSP 1 Score: 239 bits (611), Expect = 6.210e-79 Identity = 124/156 (79.49%), Postives = 143/156 (91.67%), Query Frame = 1 Query: 1 MFDNYSSVLIIGTEKTGGLFDFDGTLPVIALQFVIFMFVLNFILYTPLLDTIDERNIYISKSLSEATSILAKSNELNLKYEKKTSKARKAVALDLLTYQKLYKDILEEKMKSSEVFIDKFLTETTKNFEDNKETILKSFDTEIDSLSNQIMKKIMS 468 MF NY+S+LIIGTEKTGGLFDFDGTLPVIA+QFV+FMF+LNFILYTPLLDTIDERNIYI SL EAT++LAKSN+LN KYEKK SKARKA LDL+TYQKLYKDIL+EKMKSS++FID FL ETTKNFE+NK+ IL SFD+EIDSLS+QI+ KI++ Sbjct: 1 MFYNYNSILIIGTEKTGGLFDFDGTLPVIAIQFVLFMFILNFILYTPLLDTIDERNIYIKTSLEEATNVLAKSNQLNTKYEKKASKARKAAKLDLITYQKLYKDILDEKMKSSQIFIDDFLVETTKNFENNKDNILVSFDSEIDSLSSQIITKILT 156
BLAST of mRNA_L-elsbetiae_contig10.21.1 vs. uniprot
Match: D1GJH9_FUCVE (ATP synthase CF0 B' chain subunit II n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJH9_FUCVE) HSP 1 Score: 219 bits (558), Expect = 7.340e-71 Identity = 114/156 (73.08%), Postives = 133/156 (85.26%), Query Frame = 1 Query: 1 MFDNYSSVLIIGTEKTGGLFDFDGTLPVIALQFVIFMFVLNFILYTPLLDTIDERNIYISKSLSEATSILAKSNELNLKYEKKTSKARKAVALDLLTYQKLYKDILEEKMKSSEVFIDKFLTETTKNFEDNKETILKSFDTEIDSLSNQIMKKIMS 468 MF +Y+S+ I+ TEKTGGLFDFDGTLPVI LQF+ FMF+LNFILY PLLDTIDERNIYI KSL EAT++L +N+LN+KYE K SKARKA LDLLTYQ LYKDILEEKMKSS++F D+FL ETT NFE NK+ IL SFD EIDSL++QIM KI++ Sbjct: 1 MFYHYNSIFILVTEKTGGLFDFDGTLPVIGLQFIFFMFILNFILYNPLLDTIDERNIYIKKSLDEATNVLTNANQLNVKYENKASKARKAAKLDLLTYQNLYKDILEEKMKSSQIFTDEFLNETTANFEINKDEILGSFDKEIDSLTSQIMNKILT 156
BLAST of mRNA_L-elsbetiae_contig10.21.1 vs. uniprot
Match: A0A1L2F1S8_9PHAE (AtpG n=13 Tax=Sargassaceae TaxID=3014 RepID=A0A1L2F1S8_9PHAE) HSP 1 Score: 215 bits (548), Expect = 2.440e-69 Identity = 115/156 (73.72%), Postives = 131/156 (83.97%), Query Frame = 1 Query: 1 MFDNYSSVLIIGTEKTGGLFDFDGTLPVIALQFVIFMFVLNFILYTPLLDTIDERNIYISKSLSEATSILAKSNELNLKYEKKTSKARKAVALDLLTYQKLYKDILEEKMKSSEVFIDKFLTETTKNFEDNKETILKSFDTEIDSLSNQIMKKIMS 468 MF NYSS+LII TEKTGGLFDFDGTLPVI+LQF+IFMF+LN ILY PLLDTID RN YI KSL EA IL +N+LN K+E+K SKARKA LDL+ YQ LYKDILEEKMKSS++FID FLTETT+NFE NK+ IL FD EIDSL++QIM KI+S Sbjct: 1 MFYNYSSILIIVTEKTGGLFDFDGTLPVISLQFIIFMFILNSILYNPLLDTIDARNTYIKKSLDEAAKILTNANQLNEKFEEKASKARKAAKLDLVIYQNLYKDILEEKMKSSQIFIDDFLTETTENFESNKDEILIGFDNEIDSLTSQIMTKILS 156
BLAST of mRNA_L-elsbetiae_contig10.21.1 vs. uniprot
Match: A0A8F0F723_9PHAE (CF0 subunit II n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F723_9PHAE) HSP 1 Score: 193 bits (491), Expect = 1.150e-60 Identity = 103/152 (67.76%), Postives = 124/152 (81.58%), Query Frame = 1 Query: 10 NYSSVLIIGTEKTGGLFDFDGTLPVIALQFVIFMFVLNFILYTPLLDTIDERNIYISKSLSEATSILAKSNELNLKYEKKTSKARKAVALDLLTYQKLYKDILEEKMKSSEVFIDKFLTETTKNFEDNKETILKSFDTEIDSLSNQIMKKIM 465 N++S+L+IGTEK GGLFDFDGTLP+IALQFVI MF+LNFILYTPLLD ID RNIY+ + L A+ +L S LN +YEKKTS+ARKA LDL+ YQKL K+ILEEK+K+S+ IDKFL E T NFE NKE+IL SF+ EI+SLS QIM KI+ Sbjct: 4 NFNSILLIGTEKPGGLFDFDGTLPIIALQFVILMFLLNFILYTPLLDYIDGRNIYVDECLKAASFLLKNSKALNAEYEKKTSQARKAAKLDLVIYQKLSKEILEEKVKTSQASIDKFLNEMTNNFEQNKESILTSFENEIESLSGQIMSKIL 155
BLAST of mRNA_L-elsbetiae_contig10.21.1 vs. uniprot
Match: A0A8E5XRC8_9PHAE (ATP synthase CF0 beta' subunit n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRC8_9PHAE) HSP 1 Score: 189 bits (479), Expect = 1.210e-58 Identity = 99/152 (65.13%), Postives = 123/152 (80.92%), Query Frame = 1 Query: 13 YSSVLIIGTEKTGGLFDFDGTLPVIALQFVIFMFVLNFILYTPLLDTIDERNIYISKSLSEATSILAKSNELNLKYEKKTSKARKAVALDLLTYQKLYKDILEEKMKSSEVFIDKFLTETTKNFEDNKETILKSFDTEIDSLSNQIMKKIMS 468 Y VL++ TEKTGGLFDFDGTLPVI LQF+ MFVLN +LY PLL+TID RN YI +SL +A++ L ++N+LNLKYE K ++ARKA +D++TYQKLYKDIL+ +M+SS+ ID F+ ETTKNF+DNKE IL S D EIDSLSNQI KI+S Sbjct: 19 YDFVLMLATEKTGGLFDFDGTLPVIVLQFLGLMFVLNSMLYAPLLETIDTRNFYIRRSLEKASTFLTEANQLNLKYENKATRARKAAKIDIVTYQKLYKDILDNEMRSSQNSIDDFVAETTKNFDDNKEKILASLDNEIDSLSNQITTKILS 170
BLAST of mRNA_L-elsbetiae_contig10.21.1 vs. uniprot
Match: A0A2I4Q2L6_9PHAE (ATP synthase CF0 B' chain subunit II n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2L6_9PHAE) HSP 1 Score: 179 bits (454), Expect = 4.730e-55 Identity = 94/153 (61.44%), Postives = 124/153 (81.05%), Query Frame = 1 Query: 10 NYSSVLIIGTEKTGGLFDFDGTLPVIALQFVIFMFVLNFILYTPLLDTIDERNIYISKSLSEATSILAKSNELNLKYEKKTSKARKAVALDLLTYQKLYKDILEEKMKSSEVFIDKFLTETTKNFEDNKETILKSFDTEIDSLSNQIMKKIMS 468 N++++ +I TEKTGGLFDFDGTL VI QF++ M +L +LY PLLD +DER Y+ +SL EA++ILA+SN LN KYEKKTS+ARK V LDLL YQKLYKD+L++KMKS + FID+FL T KN E +KE ILKSFDT+I+SL+N++M K+++ Sbjct: 3 NFNTLFLITTEKTGGLFDFDGTLIVIVFQFILLMVILPSLLYNPLLDIMDERMTYMEESLEEASTILAESNRLNSKYEKKTSRARKVVELDLLMYQKLYKDLLDDKMKSLQFFIDEFLMVTIKNSETSKEIILKSFDTQIESLTNEMMVKLLA 155 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10.21.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10.21.1 >prot_L-elsbetiae_contig10.21.1 ID=prot_L-elsbetiae_contig10.21.1|Name=mRNA_L-elsbetiae_contig10.21.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=158bp MFDNYSSVLIIGTEKTGGLFDFDGTLPVIALQFVIFMFVLNFILYTPLLDback to top mRNA from alignment at L-elsbetiae_contig10:41377..41850+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10.21.1 ID=mRNA_L-elsbetiae_contig10.21.1|Name=mRNA_L-elsbetiae_contig10.21.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=474bp|location=Sequence derived from alignment at L-elsbetiae_contig10:41377..41850+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10:41377..41850+ >mRNA_L-elsbetiae_contig10.21.1 ID=mRNA_L-elsbetiae_contig10.21.1|Name=mRNA_L-elsbetiae_contig10.21.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=948bp|location=Sequence derived from alignment at L-elsbetiae_contig10:41377..41850+ (Laminarionema elsbetiae ELsaHSoW15)back to top |