mRNA_L-elsbetiae_contig10140.193.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10140.193.1 vs. uniprot
Match: A0A6H5J5R6_9PHAE (Aspartate--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J5R6_9PHAE) HSP 1 Score: 171 bits (434), Expect = 2.620e-48 Identity = 76/81 (93.83%), Postives = 81/81 (100.00%), Query Frame = 3 Query: 3 RGQEICSGAQRCHDADMLVEILQEKGVPAEPLSDYINAFRHGCPPHGGGGVGLERIVFLYLGLDNIRKASMFPRDPSRCTP 245 RGQEICSGAQRCHDADML++IL+EKGVPAEPLSDYINAFRHGCPPHGGGG+GLERIVFLYLGLDNIRKASMFPRDPSRC+P Sbjct: 648 RGQEICSGAQRCHDADMLMQILEEKGVPAEPLSDYINAFRHGCPPHGGGGIGLERIVFLYLGLDNIRKASMFPRDPSRCSP 728
BLAST of mRNA_L-elsbetiae_contig10140.193.1 vs. uniprot
Match: A0A7S2CUT1_9EUKA (Aspartate--tRNA ligase n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2CUT1_9EUKA) HSP 1 Score: 140 bits (354), Expect = 4.960e-41 Identity = 59/81 (72.84%), Postives = 70/81 (86.42%), Query Frame = 3 Query: 3 RGQEICSGAQRCHDADMLVEILQEKGVPAEPLSDYINAFRHGCPPHGGGGVGLERIVFLYLGLDNIRKASMFPRDPSRCTP 245 RG+EICSGAQR HD +L+E + KGVP EPL Y++A RHG PPHGGGG+G+ER+VFLYLGLDN+RKASMFPRDPSRC+P Sbjct: 86 RGEEICSGAQRVHDPQLLIETIASKGVPLEPLKAYVDAMRHGMPPHGGGGIGMERVVFLYLGLDNVRKASMFPRDPSRCSP 166
BLAST of mRNA_L-elsbetiae_contig10140.193.1 vs. uniprot
Match: A0A835YQK2_9STRA (Aspartate--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQK2_9STRA) HSP 1 Score: 148 bits (374), Expect = 2.040e-40 Identity = 64/81 (79.01%), Postives = 72/81 (88.89%), Query Frame = 3 Query: 3 RGQEICSGAQRCHDADMLVEILQEKGVPAEPLSDYINAFRHGCPPHGGGGVGLERIVFLYLGLDNIRKASMFPRDPSRCTP 245 RGQEICSGAQRCHDAD LV+I++ KGVP EPL YI++FR GC PHGG G+GLER+VFLYLGLDN+RKASMFPRDP RCTP Sbjct: 489 RGQEICSGAQRCHDADKLVQIIESKGVPVEPLESYISSFRAGCVPHGGAGIGLERVVFLYLGLDNVRKASMFPRDPRRCTP 569
BLAST of mRNA_L-elsbetiae_contig10140.193.1 vs. uniprot
Match: A0A7S3H584_9STRA (Aspartate--tRNA ligase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H584_9STRA) HSP 1 Score: 135 bits (340), Expect = 1.440e-39 Identity = 58/81 (71.60%), Postives = 69/81 (85.19%), Query Frame = 3 Query: 3 RGQEICSGAQRCHDADMLVEILQEKGVPAEPLSDYINAFRHGCPPHGGGGVGLERIVFLYLGLDNIRKASMFPRDPSRCTP 245 RGQEICSGAQRCHD ML + + EKG+P EPL YI++F+HG PH G G+GL+R+VFLYLGLDN+RKASMFPRDP+RCTP Sbjct: 35 RGQEICSGAQRCHDPVMLEKRILEKGLPLEPLQSYIDSFKHGVSPHAGAGIGLDRVVFLYLGLDNVRKASMFPRDPNRCTP 115
BLAST of mRNA_L-elsbetiae_contig10140.193.1 vs. uniprot
Match: K8YYM7_NANGC (Aspartate--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YYM7_NANGC) HSP 1 Score: 141 bits (355), Expect = 3.520e-38 Identity = 60/81 (74.07%), Postives = 68/81 (83.95%), Query Frame = 3 Query: 3 RGQEICSGAQRCHDADMLVEILQEKGVPAEPLSDYINAFRHGCPPHGGGGVGLERIVFLYLGLDNIRKASMFPRDPSRCTP 245 RGQEICSGAQR HD D+L + KG+P EPL Y+NAFRHG PPHGG G+GLER+VFLYLGLDN+RKASMFPRDP+RC P Sbjct: 395 RGQEICSGAQRIHDPDLLTRTIAAKGLPMEPLESYVNAFRHGVPPHGGAGIGLERVVFLYLGLDNVRKASMFPRDPNRCEP 475
BLAST of mRNA_L-elsbetiae_contig10140.193.1 vs. uniprot
Match: K0T7N7_THAOC (Aspartate--tRNA ligase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T7N7_THAOC) HSP 1 Score: 130 bits (328), Expect = 5.980e-38 Identity = 57/82 (69.51%), Postives = 68/82 (82.93%), Query Frame = 3 Query: 3 RGQEICSGAQRCHDADMLVEILQEKGVP-AEPLSDYINAFRHGCPPHGGGGVGLERIVFLYLGLDNIRKASMFPRDPSRCTP 245 RGQEICSGAQRCHD D++ EI+ +KG+ + L YI +FRHG PH G G+GLER+VFLYLGLDN+RKASMFPRDP+RCTP Sbjct: 18 RGQEICSGAQRCHDPDVVTEIIHKKGIEIGDGLKTYIESFRHGVSPHAGAGIGLERVVFLYLGLDNVRKASMFPRDPNRCTP 99
BLAST of mRNA_L-elsbetiae_contig10140.193.1 vs. uniprot
Match: W7TE52_9STRA (Aspartate--tRNA ligase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TE52_9STRA) HSP 1 Score: 141 bits (355), Expect = 1.360e-37 Identity = 60/81 (74.07%), Postives = 68/81 (83.95%), Query Frame = 3 Query: 3 RGQEICSGAQRCHDADMLVEILQEKGVPAEPLSDYINAFRHGCPPHGGGGVGLERIVFLYLGLDNIRKASMFPRDPSRCTP 245 RGQEICSGAQR HD D+L + KG+P EPL Y+NAFRHG PPHGG G+GLER+VFLYLGLDN+RKASMFPRDP+RC P Sbjct: 521 RGQEICSGAQRIHDPDLLTRTIAAKGLPMEPLESYVNAFRHGVPPHGGAGIGLERVVFLYLGLDNVRKASMFPRDPNRCEP 601
BLAST of mRNA_L-elsbetiae_contig10140.193.1 vs. uniprot
Match: A0A8J9X6U5_PHATR (Hypothetical protein n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X6U5_PHATR) HSP 1 Score: 133 bits (335), Expect = 1.020e-36 Identity = 59/82 (71.95%), Postives = 69/82 (84.15%), Query Frame = 3 Query: 3 RGQEICSGAQRCHDADMLVEILQEKGVPA-EPLSDYINAFRHGCPPHGGGGVGLERIVFLYLGLDNIRKASMFPRDPSRCTP 245 RGQEICSGAQRCHD D++ +ILQEKG+ + L YI +FRHG PH G G+GLER+VFLYLGLDN+RKASMFPRDP+RCTP Sbjct: 209 RGQEICSGAQRCHDPDLVEKILQEKGIEVGDGLKSYIESFRHGVSPHAGAGIGLERVVFLYLGLDNVRKASMFPRDPNRCTP 290
BLAST of mRNA_L-elsbetiae_contig10140.193.1 vs. uniprot
Match: A0A7R9WNB7_9STRA (Aspartate--tRNA ligase n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WNB7_9STRA) HSP 1 Score: 133 bits (335), Expect = 1.710e-36 Identity = 59/82 (71.95%), Postives = 71/82 (86.59%), Query Frame = 3 Query: 3 RGQEICSGAQRCHDADMLVEILQEKGV-PAEPLSDYINAFRHGCPPHGGGGVGLERIVFLYLGLDNIRKASMFPRDPSRCTP 245 RGQEICSGAQRCHD ++L++ILQ+KGV P + L YI +FRHG PH G G+GLER+VFLYLGL+NIRKASMFPRDP+RC+P Sbjct: 232 RGQEICSGAQRCHDPELLLDILQQKGVSPGDGLDKYIESFRHGVDPHAGAGIGLERVVFLYLGLNNIRKASMFPRDPNRCSP 313
BLAST of mRNA_L-elsbetiae_contig10140.193.1 vs. uniprot
Match: A0A1Z5KKG9_FISSO (Aspartate--tRNA ligase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KKG9_FISSO) HSP 1 Score: 137 bits (344), Expect = 4.460e-36 Identity = 61/82 (74.39%), Postives = 71/82 (86.59%), Query Frame = 3 Query: 3 RGQEICSGAQRCHDADMLVEILQEKGV-PAEPLSDYINAFRHGCPPHGGGGVGLERIVFLYLGLDNIRKASMFPRDPSRCTP 245 RGQEICSGAQRCHD D++V+ LQ+KG+ P E LS YI +FRHG PH G G+GLER+VFLYLGLDN+RKASMFPRDP+RCTP Sbjct: 509 RGQEICSGAQRCHDPDLVVKNLQDKGIEPGEGLSAYIESFRHGVSPHAGAGIGLERVVFLYLGLDNVRKASMFPRDPNRCTP 590 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10140.193.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10140.193.1 >prot_L-elsbetiae_contig10140.193.1 ID=prot_L-elsbetiae_contig10140.193.1|Name=mRNA_L-elsbetiae_contig10140.193.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=57bp YAGRRSVPGHNGAMTPTCSWRYSKRRVFRQNRCPTTSMPSDTGALLMAVAback to top mRNA from alignment at L-elsbetiae_contig10140:1505..2628- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10140.193.1 ID=mRNA_L-elsbetiae_contig10140.193.1|Name=mRNA_L-elsbetiae_contig10140.193.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1124bp|location=Sequence derived from alignment at L-elsbetiae_contig10140:1505..2628- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10140:1505..2628- >mRNA_L-elsbetiae_contig10140.193.1 ID=mRNA_L-elsbetiae_contig10140.193.1|Name=mRNA_L-elsbetiae_contig10140.193.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=342bp|location=Sequence derived from alignment at L-elsbetiae_contig10140:1505..2628- (Laminarionema elsbetiae ELsaHSoW15)back to top |