mRNA_L-elsbetiae_contig9966.18891.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9966.18891.1 vs. uniprot
Match: D8LEB7_ECTSI (IRK domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEB7_ECTSI) HSP 1 Score: 264 bits (674), Expect = 1.840e-86 Identity = 132/154 (85.71%), Postives = 146/154 (94.81%), Query Frame = 1 Query: 1 SSGKWNIRRIKTQADIKKLIGMDPFHSFLNQSTFKIVLRIITVYLGIVLVFAIVYTTISAFLGCNLQLSSIREGFLFSLETMSTVGYGTQDYLFGSCWIMLPVLSLQACMGLLIDAFLIGILFARISRPQTRANTVVFTKNAVIRRVRGEAYFM 462 S G+WNIRR+KTQAD++KLIG+DPFHSFLNQST KI+L II +YL +VL+FAIVYTTIS LGCNLQL+SIREGFLFSLETM+TVGYGT DYLFGSCWIMLP+LSLQAC+GLLIDAFLIGILFAR+SRPQTRANTVVFTKNAVIRRVRGEAYFM Sbjct: 127 SIGRWNIRRLKTQADVQKLIGLDPFHSFLNQSTLKIILLIIALYLSLVLLFAIVYTTISLTLGCNLQLTSIREGFLFSLETMTTVGYGTHDYLFGSCWIMLPMLSLQACIGLLIDAFLIGILFARLSRPQTRANTVVFTKNAVIRRVRGEAYFM 280
BLAST of mRNA_L-elsbetiae_contig9966.18891.1 vs. uniprot
Match: A0A6H5K8M2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8M2_9PHAE) HSP 1 Score: 263 bits (673), Expect = 3.480e-81 Identity = 131/154 (85.06%), Postives = 146/154 (94.81%), Query Frame = 1 Query: 1 SSGKWNIRRIKTQADIKKLIGMDPFHSFLNQSTFKIVLRIITVYLGIVLVFAIVYTTISAFLGCNLQLSSIREGFLFSLETMSTVGYGTQDYLFGSCWIMLPVLSLQACMGLLIDAFLIGILFARISRPQTRANTVVFTKNAVIRRVRGEAYFM 462 S G+WNIRR+KTQAD++KLIG+DPFHSFLNQST KI+LRII +YL +V +FAIVYTTIS LGCNLQL+SIREGFLFSLETM+TVGYGT DYLFGSCW+MLP+LSLQAC+GLLIDAFLIGILFAR+SRPQTRANTVVFTKNAVIRRVRGEAYFM Sbjct: 90 SVGRWNIRRLKTQADVQKLIGLDPFHSFLNQSTLKIILRIIGLYLSLVFLFAIVYTTISHTLGCNLQLTSIREGFLFSLETMTTVGYGTHDYLFGSCWVMLPMLSLQACIGLLIDAFLIGILFARLSRPQTRANTVVFTKNAVIRRVRGEAYFM 243
BLAST of mRNA_L-elsbetiae_contig9966.18891.1 vs. uniprot
Match: A0A836CL18_9STRA (Inward rectifier potassium channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL18_9STRA) HSP 1 Score: 166 bits (421), Expect = 9.610e-49 Identity = 82/154 (53.25%), Postives = 110/154 (71.43%), Query Frame = 1 Query: 1 SSGKWNIRRIKTQADIKKLIGMDPFHSFLNQSTFKIVLRIITVYLGIVLVFAIVYTTISAFLGCNLQLSSIREGFLFSLETMSTVGYGTQDYLFGSCWIMLPVLSLQACMGLLIDAFLIGILFARISRPQTRANTVVFTKNAVIRRVRGEAYFM 462 S G+WNI R I+ L D FH+ L+ +T+K++ + YL +V FA++Y IS F GCN+ + RE + FSLETM+TVGYGTQD FG CW ++ +++ QAC GLLIDA LIG+LFAR++RPQTRA+TVVF+ AV+RR+RGE YFM Sbjct: 14 SYGRWNIDRNTKDDHIRTLFNNDRFHTVLHMTTWKVLSYLFFAYLVVVSTFALIYLIISHFDGCNMGIVDYREAYYFSLETMTTVGYGTQDVFFGRCWSVMVIITAQACCGLLIDALLIGVLFARLARPQTRASTVVFSNKAVLRRIRGEYYFM 167
BLAST of mRNA_L-elsbetiae_contig9966.18891.1 vs. uniprot
Match: A0A835YU47_9STRA (Inward rectifier potassium channel-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU47_9STRA) HSP 1 Score: 166 bits (420), Expect = 1.400e-48 Identity = 82/154 (53.25%), Postives = 110/154 (71.43%), Query Frame = 1 Query: 1 SSGKWNIRRIKTQADIKKLIGMDPFHSFLNQSTFKIVLRIITVYLGIVLVFAIVYTTISAFLGCNLQLSSIREGFLFSLETMSTVGYGTQDYLFGSCWIMLPVLSLQACMGLLIDAFLIGILFARISRPQTRANTVVFTKNAVIRRVRGEAYFM 462 S G+WNI R ++KL D FH+ L+ +T+K++ + YL +V VFA +Y I+ F GCNL + RE + FSLETM+TVG+GTQD FG CW ++ +++ QAC GLLIDA LIG+LFAR+ RPQTRA+TVVF+ AV+RR+RGE YFM Sbjct: 39 SFGRWNIGRNTKDEGMRKLFSNDWFHTVLHMTTWKVLGALFLTYLAVVTVFAALYLAIARFDGCNLGIVDYREAYYFSLETMTTVGFGTQDVFFGRCWSVMVIITAQACSGLLIDALLIGLLFARLGRPQTRASTVVFSDKAVLRRIRGEYYFM 192
BLAST of mRNA_L-elsbetiae_contig9966.18891.1 vs. uniprot
Match: A0A482S2N8_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S2N8_9ARCH) HSP 1 Score: 127 bits (318), Expect = 3.760e-33 Identity = 68/154 (44.16%), Postives = 100/154 (64.94%), Query Frame = 1 Query: 1 SSGKWNIRRIKTQADIKKLIGMDPFHSFLNQSTFKIVLRIITVYLGIVLVFAIVYTTISAFLGCNLQLSSIREGFLFSLETMSTVGYGTQDYLFGSCWIMLPVLSLQACMGLLIDAFLIGILFARISRPQTRANTVVFTKNAVIRRVRGEAYFM 462 SSG+ +++ +AD L G D FHS ++ T +IV + TVY+ V FA +Y I C L + F FSLETM+T+GY T+D F +C I+ VL+LQ C+ L++D IGI++ R++RP +RA+T++F+KNAVIRR+RG+ YFM Sbjct: 48 SSGRIYVKKRIQKADWWALYGNDWFHSLVDAPTLRIVALLFTVYVATVAFFATLYYAIRLNYVCELDFETWLGAFDFSLETMATIGYTTKDLSFANCAIVTVVLTLQCCIRLIVDGSTIGIIYCRLARPHSRASTIIFSKNAVIRRIRGKLYFM 201
BLAST of mRNA_L-elsbetiae_contig9966.18891.1 vs. uniprot
Match: A0A8K1C704_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C704_PYTOL) HSP 1 Score: 122 bits (307), Expect = 3.710e-30 Identity = 65/156 (41.67%), Postives = 100/156 (64.10%), Query Frame = 1 Query: 1 SSGKWNIRRIKTQADIKKLIGMDPFHSFLNQSTFKIVLRIITVYLGIVLVFAIVYTTISAFLGCNLQLSSIREGFLFSLETMSTVGYGTQ--DYLFGSCWIMLPVLSLQACMGLLIDAFLIGILFARISRPQTRANTVVFTKNAVIRRVRGEAYFM 462 S G+WNIRR K + KL DPFH+F+N K++ +I VYL ++++F +YTT+ + C + + +GF FS+ M T+G+GT D FG C M ++++Q+ + +++DA IG+LF R +R Q RANT+V + AV+RR+RGE YFM Sbjct: 70 SRGRWNIRREKVD-NYWKLYLQDPFHTFINMRLSKVMSGLIGVYLIVLIIFGALYTTVPREM-CKTAIFTYFDGFSFSVSVMFTIGFGTNGGDVFFGDCVWMQVIITVQSLIAIILDALSIGVLFGRFARAQARANTIVLSSTAVVRRIRGELYFM 223
BLAST of mRNA_L-elsbetiae_contig9966.18891.1 vs. uniprot
Match: A0A5D6YC93_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YC93_9STRA) HSP 1 Score: 121 bits (303), Expect = 1.290e-29 Identity = 66/156 (42.31%), Postives = 98/156 (62.82%), Query Frame = 1 Query: 1 SSGKWNIRRIKTQADIKKLIGMDPFHSFLNQSTFKIVLRIITVYLGIVLVFAIVYTTISAFLGCNLQLSSIREGFLFSLETMSTVGYGTQ--DYLFGSCWIMLPVLSLQACMGLLIDAFLIGILFARISRPQTRANTVVFTKNAVIRRVRGEAYFM 462 S G+WNIRR K ++ KL DPFHS +N K++ ++ +YL +L F +YTT+ C + S+ +GF FS+ + T+G+GT D F C M V++ ++ +G+L++A IGI+F R SR Q RANT+V + NAV+RR+RGE YFM Sbjct: 66 SKGRWNIRRHKVES-YWKLYLQDPFHSVVNMRLSKVLGTLVFLYLSTLLFFGFLYTTVPD--HCKTAIFSLYDGFSFSVSVLFTIGFGTNGGDVFFNRCGWMQTVITSESLVGMLLEAISIGIIFQRFSRAQARANTIVLSTNAVVRRIRGELYFM 218
BLAST of mRNA_L-elsbetiae_contig9966.18891.1 vs. uniprot
Match: A0A833SV26_PHYIN (Inward rectifier potassium channel transmembrane domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SV26_PHYIN) HSP 1 Score: 116 bits (291), Expect = 1.110e-28 Identity = 63/157 (40.13%), Postives = 100/157 (63.69%), Query Frame = 1 Query: 1 SSGKWNIRRIKTQADIKKLIGMDPFHSFLNQSTFKIVLRIITVYLGIVLVFAIVYTTISA-FLGCNLQLSSIREGFLFSLETMSTVGYG--TQDYLFGSCWIMLPVLSLQACMGLLIDAFLIGILFARISRPQTRANTVVFTKNAVIRRVRGEAYFM 462 S G++N+ R D +K+ DPFH+ +N T +I+ + Y I+L FA+ Y +S C++ LSSI + ++FSLET+ T+GYG T D +G C + +L+L++ G+++D+ IGI +AR SR RANT++F+ +AVIR++RG YFM Sbjct: 40 SLGRFNVYR--KGGDWRKIYWDDPFHTVINTRTSRIIWGVFIAYFFIILFFAVAYLDVSVRHPTCHVGLSSIMDAYIFSLETIMTIGYGAPTDDIFYGGCTSIATLLTLESFSGIILDSVCIGIFYARFSRANQRANTIMFSNSAVIRKIRGHFYFM 194
BLAST of mRNA_L-elsbetiae_contig9966.18891.1 vs. uniprot
Match: A0A421GNN7_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GNN7_9STRA) HSP 1 Score: 117 bits (292), Expect = 2.790e-28 Identity = 65/157 (41.40%), Postives = 100/157 (63.69%), Query Frame = 1 Query: 1 SSGKWNIRRIKTQADIKKLIGMDPFHSFLNQSTFKIVLRIITVYLGIVLVFAIVYTTISA-FLGCNLQLSSIREGFLFSLETMSTVGYG--TQDYLFGSCWIMLPVLSLQACMGLLIDAFLIGILFARISRPQTRANTVVFTKNAVIRRVRGEAYFM 462 S G++NI R D +K+ DPFH+ +N T +I+ + Y I+L FA+ Y +S C++ LSSI E ++FSLET+ T+GYG T D +G C + +L+L++ G+++D+ IGI +AR SR RANT++F+ +AVIR++RG YFM Sbjct: 38 SLGQFNIYR--KGGDWRKIYWDDPFHTVINTRTSRIIWGVFIAYFFIILFFALAYLDVSVRHPTCHVGLSSIIEAYIFSLETIMTIGYGAPTNDIFYGGCTTIATLLTLESFAGIILDSVCIGIFYARFSRANQRANTIMFSNSAVIRKIRGHYYFM 192
BLAST of mRNA_L-elsbetiae_contig9966.18891.1 vs. uniprot
Match: K3WWT5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WWT5_GLOUD) HSP 1 Score: 117 bits (292), Expect = 5.380e-28 Identity = 60/156 (38.46%), Postives = 96/156 (61.54%), Query Frame = 1 Query: 1 SSGKWNIRRIKTQADIKKLIGMDPFHSFLNQSTFKIVLRIITVYLGIVLVFAIVYTTISAFLGCNLQLSSIREGFLFSLETMSTVGYGTQ--DYLFGSCWIMLPVLSLQACMGLLIDAFLIGILFARISRPQTRANTVVFTKNAVIRRVRGEAYFM 462 S G+WNIRR K KL DPFH+ +N K++ ++ +Y+ ++ F ++Y T+ + CN + S +GF FS+ + T+G+GT D F C + ++++++ + +L+DA IGI+F R SR Q RANT+V + NA +RR+RGE YFM Sbjct: 75 SKGRWNIRRQK-MPQYWKLYLQDPFHTLVNLRLSKVLASLVVMYIAALMFFGLLYRTVPS--SCNTAIHSYFDGFSFSVSVLFTIGFGTNGGDVFFNECVWVQTIITMESLVAVLLDAIAIGIIFQRFSRAQARANTIVLSTNACVRRIRGELYFM 227 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9966.18891.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9966.18891.1 >prot_L-elsbetiae_contig9966.18891.1 ID=prot_L-elsbetiae_contig9966.18891.1|Name=mRNA_L-elsbetiae_contig9966.18891.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=155bp SSGKWNIRRIKTQADIKKLIGMDPFHSFLNQSTFKIVLRIITVYLGIVLVback to top mRNA from alignment at L-elsbetiae_contig9966:220..1407- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9966.18891.1 ID=mRNA_L-elsbetiae_contig9966.18891.1|Name=mRNA_L-elsbetiae_contig9966.18891.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1188bp|location=Sequence derived from alignment at L-elsbetiae_contig9966:220..1407- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9966:220..1407- >mRNA_L-elsbetiae_contig9966.18891.1 ID=mRNA_L-elsbetiae_contig9966.18891.1|Name=mRNA_L-elsbetiae_contig9966.18891.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=930bp|location=Sequence derived from alignment at L-elsbetiae_contig9966:220..1407- (Laminarionema elsbetiae ELsaHSoW15)back to top |