prot_L-elsbetiae_contig9966.18891.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9966.18891.1
Unique Nameprot_L-elsbetiae_contig9966.18891.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length155
Homology
BLAST of mRNA_L-elsbetiae_contig9966.18891.1 vs. uniprot
Match: D8LEB7_ECTSI (IRK domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEB7_ECTSI)

HSP 1 Score: 264 bits (674), Expect = 1.840e-86
Identity = 132/154 (85.71%), Postives = 146/154 (94.81%), Query Frame = 0
Query:    1 SSGKWNIRRIKTQADIKKLIGMDPFHSFLNQSTFKIVLRIITVYLGIVLVFAIVYTTISAFLGCNLQLSSIREGFLFSLETMSTVGYGTQDYLFGSCWIMLPVLSLQACMGLLIDAFLIGILFARISRPQTRANTVVFTKNAVIRRVRGEAYFM 154
            S G+WNIRR+KTQAD++KLIG+DPFHSFLNQST KI+L II +YL +VL+FAIVYTTIS  LGCNLQL+SIREGFLFSLETM+TVGYGT DYLFGSCWIMLP+LSLQAC+GLLIDAFLIGILFAR+SRPQTRANTVVFTKNAVIRRVRGEAYFM
Sbjct:  127 SIGRWNIRRLKTQADVQKLIGLDPFHSFLNQSTLKIILLIIALYLSLVLLFAIVYTTISLTLGCNLQLTSIREGFLFSLETMTTVGYGTHDYLFGSCWIMLPMLSLQACIGLLIDAFLIGILFARLSRPQTRANTVVFTKNAVIRRVRGEAYFM 280          
BLAST of mRNA_L-elsbetiae_contig9966.18891.1 vs. uniprot
Match: A0A6H5K8M2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8M2_9PHAE)

HSP 1 Score: 263 bits (673), Expect = 3.480e-81
Identity = 131/154 (85.06%), Postives = 146/154 (94.81%), Query Frame = 0
Query:    1 SSGKWNIRRIKTQADIKKLIGMDPFHSFLNQSTFKIVLRIITVYLGIVLVFAIVYTTISAFLGCNLQLSSIREGFLFSLETMSTVGYGTQDYLFGSCWIMLPVLSLQACMGLLIDAFLIGILFARISRPQTRANTVVFTKNAVIRRVRGEAYFM 154
            S G+WNIRR+KTQAD++KLIG+DPFHSFLNQST KI+LRII +YL +V +FAIVYTTIS  LGCNLQL+SIREGFLFSLETM+TVGYGT DYLFGSCW+MLP+LSLQAC+GLLIDAFLIGILFAR+SRPQTRANTVVFTKNAVIRRVRGEAYFM
Sbjct:   90 SVGRWNIRRLKTQADVQKLIGLDPFHSFLNQSTLKIILRIIGLYLSLVFLFAIVYTTISHTLGCNLQLTSIREGFLFSLETMTTVGYGTHDYLFGSCWVMLPMLSLQACIGLLIDAFLIGILFARLSRPQTRANTVVFTKNAVIRRVRGEAYFM 243          
BLAST of mRNA_L-elsbetiae_contig9966.18891.1 vs. uniprot
Match: A0A836CL18_9STRA (Inward rectifier potassium channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL18_9STRA)

HSP 1 Score: 166 bits (421), Expect = 9.610e-49
Identity = 82/154 (53.25%), Postives = 110/154 (71.43%), Query Frame = 0
Query:    1 SSGKWNIRRIKTQADIKKLIGMDPFHSFLNQSTFKIVLRIITVYLGIVLVFAIVYTTISAFLGCNLQLSSIREGFLFSLETMSTVGYGTQDYLFGSCWIMLPVLSLQACMGLLIDAFLIGILFARISRPQTRANTVVFTKNAVIRRVRGEAYFM 154
            S G+WNI R      I+ L   D FH+ L+ +T+K++  +   YL +V  FA++Y  IS F GCN+ +   RE + FSLETM+TVGYGTQD  FG CW ++ +++ QAC GLLIDA LIG+LFAR++RPQTRA+TVVF+  AV+RR+RGE YFM
Sbjct:   14 SYGRWNIDRNTKDDHIRTLFNNDRFHTVLHMTTWKVLSYLFFAYLVVVSTFALIYLIISHFDGCNMGIVDYREAYYFSLETMTTVGYGTQDVFFGRCWSVMVIITAQACCGLLIDALLIGVLFARLARPQTRASTVVFSNKAVLRRIRGEYYFM 167          
BLAST of mRNA_L-elsbetiae_contig9966.18891.1 vs. uniprot
Match: A0A835YU47_9STRA (Inward rectifier potassium channel-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU47_9STRA)

HSP 1 Score: 166 bits (420), Expect = 1.400e-48
Identity = 82/154 (53.25%), Postives = 110/154 (71.43%), Query Frame = 0
Query:    1 SSGKWNIRRIKTQADIKKLIGMDPFHSFLNQSTFKIVLRIITVYLGIVLVFAIVYTTISAFLGCNLQLSSIREGFLFSLETMSTVGYGTQDYLFGSCWIMLPVLSLQACMGLLIDAFLIGILFARISRPQTRANTVVFTKNAVIRRVRGEAYFM 154
            S G+WNI R      ++KL   D FH+ L+ +T+K++  +   YL +V VFA +Y  I+ F GCNL +   RE + FSLETM+TVG+GTQD  FG CW ++ +++ QAC GLLIDA LIG+LFAR+ RPQTRA+TVVF+  AV+RR+RGE YFM
Sbjct:   39 SFGRWNIGRNTKDEGMRKLFSNDWFHTVLHMTTWKVLGALFLTYLAVVTVFAALYLAIARFDGCNLGIVDYREAYYFSLETMTTVGFGTQDVFFGRCWSVMVIITAQACSGLLIDALLIGLLFARLGRPQTRASTVVFSDKAVLRRIRGEYYFM 192          
BLAST of mRNA_L-elsbetiae_contig9966.18891.1 vs. uniprot
Match: A0A482S2N8_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S2N8_9ARCH)

HSP 1 Score: 127 bits (318), Expect = 3.760e-33
Identity = 68/154 (44.16%), Postives = 100/154 (64.94%), Query Frame = 0
Query:    1 SSGKWNIRRIKTQADIKKLIGMDPFHSFLNQSTFKIVLRIITVYLGIVLVFAIVYTTISAFLGCNLQLSSIREGFLFSLETMSTVGYGTQDYLFGSCWIMLPVLSLQACMGLLIDAFLIGILFARISRPQTRANTVVFTKNAVIRRVRGEAYFM 154
            SSG+  +++   +AD   L G D FHS ++  T +IV  + TVY+  V  FA +Y  I     C L   +    F FSLETM+T+GY T+D  F +C I+  VL+LQ C+ L++D   IGI++ R++RP +RA+T++F+KNAVIRR+RG+ YFM
Sbjct:   48 SSGRIYVKKRIQKADWWALYGNDWFHSLVDAPTLRIVALLFTVYVATVAFFATLYYAIRLNYVCELDFETWLGAFDFSLETMATIGYTTKDLSFANCAIVTVVLTLQCCIRLIVDGSTIGIIYCRLARPHSRASTIIFSKNAVIRRIRGKLYFM 201          
BLAST of mRNA_L-elsbetiae_contig9966.18891.1 vs. uniprot
Match: A0A8K1C704_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C704_PYTOL)

HSP 1 Score: 122 bits (307), Expect = 3.710e-30
Identity = 65/156 (41.67%), Postives = 100/156 (64.10%), Query Frame = 0
Query:    1 SSGKWNIRRIKTQADIKKLIGMDPFHSFLNQSTFKIVLRIITVYLGIVLVFAIVYTTISAFLGCNLQLSSIREGFLFSLETMSTVGYGTQ--DYLFGSCWIMLPVLSLQACMGLLIDAFLIGILFARISRPQTRANTVVFTKNAVIRRVRGEAYFM 154
            S G+WNIRR K   +  KL   DPFH+F+N    K++  +I VYL ++++F  +YTT+   + C   + +  +GF FS+  M T+G+GT   D  FG C  M  ++++Q+ + +++DA  IG+LF R +R Q RANT+V +  AV+RR+RGE YFM
Sbjct:   70 SRGRWNIRREKVD-NYWKLYLQDPFHTFINMRLSKVMSGLIGVYLIVLIIFGALYTTVPREM-CKTAIFTYFDGFSFSVSVMFTIGFGTNGGDVFFGDCVWMQVIITVQSLIAIILDALSIGVLFGRFARAQARANTIVLSSTAVVRRIRGELYFM 223          
BLAST of mRNA_L-elsbetiae_contig9966.18891.1 vs. uniprot
Match: A0A5D6YC93_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YC93_9STRA)

HSP 1 Score: 121 bits (303), Expect = 1.290e-29
Identity = 66/156 (42.31%), Postives = 98/156 (62.82%), Query Frame = 0
Query:    1 SSGKWNIRRIKTQADIKKLIGMDPFHSFLNQSTFKIVLRIITVYLGIVLVFAIVYTTISAFLGCNLQLSSIREGFLFSLETMSTVGYGTQ--DYLFGSCWIMLPVLSLQACMGLLIDAFLIGILFARISRPQTRANTVVFTKNAVIRRVRGEAYFM 154
            S G+WNIRR K ++   KL   DPFHS +N    K++  ++ +YL  +L F  +YTT+     C   + S+ +GF FS+  + T+G+GT   D  F  C  M  V++ ++ +G+L++A  IGI+F R SR Q RANT+V + NAV+RR+RGE YFM
Sbjct:   66 SKGRWNIRRHKVES-YWKLYLQDPFHSVVNMRLSKVLGTLVFLYLSTLLFFGFLYTTVPD--HCKTAIFSLYDGFSFSVSVLFTIGFGTNGGDVFFNRCGWMQTVITSESLVGMLLEAISIGIIFQRFSRAQARANTIVLSTNAVVRRIRGELYFM 218          
BLAST of mRNA_L-elsbetiae_contig9966.18891.1 vs. uniprot
Match: A0A833SV26_PHYIN (Inward rectifier potassium channel transmembrane domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SV26_PHYIN)

HSP 1 Score: 116 bits (291), Expect = 1.110e-28
Identity = 63/157 (40.13%), Postives = 100/157 (63.69%), Query Frame = 0
Query:    1 SSGKWNIRRIKTQADIKKLIGMDPFHSFLNQSTFKIVLRIITVYLGIVLVFAIVYTTISA-FLGCNLQLSSIREGFLFSLETMSTVGYG--TQDYLFGSCWIMLPVLSLQACMGLLIDAFLIGILFARISRPQTRANTVVFTKNAVIRRVRGEAYFM 154
            S G++N+ R     D +K+   DPFH+ +N  T +I+  +   Y  I+L FA+ Y  +S     C++ LSSI + ++FSLET+ T+GYG  T D  +G C  +  +L+L++  G+++D+  IGI +AR SR   RANT++F+ +AVIR++RG  YFM
Sbjct:   40 SLGRFNVYR--KGGDWRKIYWDDPFHTVINTRTSRIIWGVFIAYFFIILFFAVAYLDVSVRHPTCHVGLSSIMDAYIFSLETIMTIGYGAPTDDIFYGGCTSIATLLTLESFSGIILDSVCIGIFYARFSRANQRANTIMFSNSAVIRKIRGHFYFM 194          
BLAST of mRNA_L-elsbetiae_contig9966.18891.1 vs. uniprot
Match: A0A421GNN7_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GNN7_9STRA)

HSP 1 Score: 117 bits (292), Expect = 2.790e-28
Identity = 65/157 (41.40%), Postives = 100/157 (63.69%), Query Frame = 0
Query:    1 SSGKWNIRRIKTQADIKKLIGMDPFHSFLNQSTFKIVLRIITVYLGIVLVFAIVYTTISA-FLGCNLQLSSIREGFLFSLETMSTVGYG--TQDYLFGSCWIMLPVLSLQACMGLLIDAFLIGILFARISRPQTRANTVVFTKNAVIRRVRGEAYFM 154
            S G++NI R     D +K+   DPFH+ +N  T +I+  +   Y  I+L FA+ Y  +S     C++ LSSI E ++FSLET+ T+GYG  T D  +G C  +  +L+L++  G+++D+  IGI +AR SR   RANT++F+ +AVIR++RG  YFM
Sbjct:   38 SLGQFNIYR--KGGDWRKIYWDDPFHTVINTRTSRIIWGVFIAYFFIILFFALAYLDVSVRHPTCHVGLSSIIEAYIFSLETIMTIGYGAPTNDIFYGGCTTIATLLTLESFAGIILDSVCIGIFYARFSRANQRANTIMFSNSAVIRKIRGHYYFM 192          
BLAST of mRNA_L-elsbetiae_contig9966.18891.1 vs. uniprot
Match: K3WWT5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WWT5_GLOUD)

HSP 1 Score: 117 bits (292), Expect = 5.380e-28
Identity = 60/156 (38.46%), Postives = 96/156 (61.54%), Query Frame = 0
Query:    1 SSGKWNIRRIKTQADIKKLIGMDPFHSFLNQSTFKIVLRIITVYLGIVLVFAIVYTTISAFLGCNLQLSSIREGFLFSLETMSTVGYGTQ--DYLFGSCWIMLPVLSLQACMGLLIDAFLIGILFARISRPQTRANTVVFTKNAVIRRVRGEAYFM 154
            S G+WNIRR K      KL   DPFH+ +N    K++  ++ +Y+  ++ F ++Y T+ +   CN  + S  +GF FS+  + T+G+GT   D  F  C  +  ++++++ + +L+DA  IGI+F R SR Q RANT+V + NA +RR+RGE YFM
Sbjct:   75 SKGRWNIRRQK-MPQYWKLYLQDPFHTLVNLRLSKVLASLVVMYIAALMFFGLLYRTVPS--SCNTAIHSYFDGFSFSVSVLFTIGFGTNGGDVFFNECVWVQTIITMESLVAVLLDAIAIGIIFQRFSRAQARANTIVLSTNACVRRIRGELYFM 227          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9966.18891.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEB7_ECTSI1.840e-8685.71IRK domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K8M2_9PHAE3.480e-8185.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CL18_9STRA9.610e-4953.25Inward rectifier potassium channel-domain-containi... [more]
A0A835YU47_9STRA1.400e-4853.25Inward rectifier potassium channel-domain-containi... [more]
A0A482S2N8_9ARCH3.760e-3344.16Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A8K1C704_PYTOL3.710e-3041.67Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6YC93_9STRA1.290e-2942.31Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A833SV26_PHYIN1.110e-2840.13Inward rectifier potassium channel transmembrane d... [more]
A0A421GNN7_9STRA2.790e-2841.40Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
K3WWT5_GLOUD5.380e-2838.46Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.287.70coord: 22..129
e-value: 1.0E-16
score: 62.9
NoneNo IPR availablePANTHERPTHR11767:SF103coord: 1..154
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 36..62
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..35
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 99..124
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 63..98
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 125..154
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 32..149
NoneNo IPR availableTMHMMTMhelixcoord: 101..123
NoneNo IPR availableTMHMMTMhelixcoord: 36..58
IPR040445Potassium channel, inwardly rectifying, transmembrane domainPFAMPF01007IRKcoord: 63..129
e-value: 1.5E-12
score: 47.5
IPR016449Potassium channel, inwardly rectifying, KirPANTHERPTHR11767INWARD RECTIFIER POTASSIUM CHANNELcoord: 1..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9966contigL-elsbetiae_contig9966:220..1407 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9966.18891.1mRNA_L-elsbetiae_contig9966.18891.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9966 220..1407 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9966.18891.1 ID=prot_L-elsbetiae_contig9966.18891.1|Name=mRNA_L-elsbetiae_contig9966.18891.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=155bp
SSGKWNIRRIKTQADIKKLIGMDPFHSFLNQSTFKIVLRIITVYLGIVLV
FAIVYTTISAFLGCNLQLSSIREGFLFSLETMSTVGYGTQDYLFGSCWIM
LPVLSLQACMGLLIDAFLIGILFARISRPQTRANTVVFTKNAVIRRVRGE
AYFM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040445Kir_TM
IPR016449K_chnl_inward-rec_Kir