mRNA_L-elsbetiae_contig949.18471.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig949.18471.1
Unique NamemRNA_L-elsbetiae_contig949.18471.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig949.18471.1 vs. uniprot
Match: A0A6H5L932_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L932_9PHAE)

HSP 1 Score: 233 bits (594), Expect = 5.260e-62
Identity = 254/510 (49.80%), Postives = 279/510 (54.71%), Query Frame = 3 
Query:   51 PAFDHHPEDPYWAEELLPQYAP--SSRREAAAAASRRGERAGEWEVEGRGRPLPPADLLPEWEHPDARFHEADA-GRXXXXXXXXXXXGRGSRGXXXXXXXLGQHGPYGREASPPHSSAPAMERGWSQDEGFDDG------------------GGGGFQEWSAYDESPPRAAAAXXXRAP-----AAGRGRPAGPLGPRGGGGRGPEQMGLPLGDPMDRRMPLPPHGGEPFDGDERPTRMRRREAXXXXXXXXXXXXXXXXXXXXXXXXXTPGARQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPERLLDKRRYEDAFEDEAMPPRAGGAPQHRPGRRELAGPGEDPRYGA-FDPMQREFPQDGRHGPGPPRGGXXXXAPLPSNGMADPHPDELQQRPRMMRGDRPPPPQEGGGRPLRG--PGPGGYPPMNDGPPPLREDPAYYESG-PSQDGPH-----------PAQQRRDSDL-----GYGPLGRGGGRGRGA 1442
            P  +HHPEDPYW EELLPQYAP  SSRREAAA   RRGE   EWE EGRGRPLPPA+LLPEWE  D RFH+ +A G  XXXXXXXXXX    R XXXXXXX    GP G + +      P  ERGW  DEG                      GG GFQEWSA+DESPPRAA     RAP       GRG P           RGP +MG P G+  +R MP  PHG E +DG ERP RMRRREA  XXXXXXXX                 G RQP           XXXXXXXXXXXXXXXXXXXX         HPER+ DKRRYEDAFEDE M    G   ++RP  RE  GPG+DPR+G+  DP Q +F Q+ R+  GPPRG              + +P    QRPRMMR  RPP  QEGG  P  G  PG G Y PM DG    R DP YY+ G PS+ G             P   RRD DL     G  P+   GGRG GA
Sbjct: 1155 PFDEHHPEDPYWGEELLPQYAPLPSSRREAAA--GRRGE---EWEGEGRGRPLPPAELLPEWEDSDPRFHDPEARGGRXXXXXXXXXXXXXXRXXXXXXXXHAPFGPPGEDLA-----LPPGERGWGPDEGXXXXXXXXXXXXXXXXXXXXADGGSGFQEWSAFDESPPRAA--PPRRAPMGAPAGGGRGHPXXXXPXXXXXXRGPGRMGPPQGEHPERGMP--PHG-EYYDGAERPLRMRRREARPXXXXXXXXDQYEDAGYYPPR-----GPRQPEELMPQARRASXXXXXXXXXXXXXXXXXXXXQ--------HPERMPDKRRYEDAFEDEPM---RGPPLRNRPDPREFTGPGDDPRHGSGLDPQQYDFRQEDRYAQGPPRGSGGRGPXXXXXXXXEHYPGGPPQRPRMMRDGRPP--QEGG--PPHGVRPGGGDYLPMQDGXXXSRGDPGYYDGGGPSRGGXXXGRGELHLGVPPGDLRRDPDLRLPAAGRVPMPGPGGRGPGA 1629
[Close]
BLAST of mRNA_L-elsbetiae_contig949.18471.1 vs. uniprot
Match: D8LEF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEF1_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 7.040e-17
Identity = 126/234 (53.85%), Postives = 138/234 (58.97%), Query Frame = 3 
Query:  534 GRGRPAGPLGPRGGGGRGPEQMGLPLGDPMDRRMPLPPHGGEPFDGDERPTRMRRREAXXXXXXXXXXXXXXXXXXXXXXXXXTPGARQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPERLLDKRRYEDAFEDEAMPPRAGGAPQHRPGRRELAGPGEDPRYGA-FDPMQREFPQDGRHGPGPPRGGXXXXAPLPSNGMADPHPDELQQRPRMMRGDRPP 1232
            GRG PAG         RGP +MG P G+  +R MP  PHG E +DG ERP RMRRREA XXXXXXXXXXXXXXXX          G RQP          XXXXXXXXXXXXXXXXXXXXX         HPER+ DKRRYED FEDE M    G   ++RP  RE AGPG++PR G  FDP Q +F Q+ R+  GPPR  XXXX                 QRPRMMR  RPP
Sbjct:    8 GRGHPAGXXPGXXXXXRGPGRMGPPPGEHPERGMP--PHG-EYYDGAERPLRMRRREARXXXXXXXXXXXXXXXXYYPPR-----GPRQPEELMPQARRAXXXXXXXXXXXXXXXXXXXXXQ--------HPERMPDKRRYEDTFEDEPM---RGPPLRNRPDPREFAGPGDEPRRGGGFDPQQHDFCQEDRYAQGPPRXXXXXXXXXXXXXXXXXXXXXXXQRPRMMRDGRPP 222
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig949.18471.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L932_9PHAE5.260e-6249.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEF1_ECTSI7.040e-1753.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig949contigL-elsbetiae_contig949:13043..17918 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons7
Model size1781
Cds size1767
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig949.18471.1prot_L-elsbetiae_contig949.18471.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig949 13043..17904 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817015.8929899-CDS-L-elsbetiae_contig949:13042..137411622817015.8929899-CDS-L-elsbetiae_contig949:13042..13741Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig949 13043..13741 -
1691683984.6742148-CDS-L-elsbetiae_contig949:13042..137411691683984.6742148-CDS-L-elsbetiae_contig949:13042..13741Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig949 13043..13741 -
1622817015.9039452-CDS-L-elsbetiae_contig949:14127..141991622817015.9039452-CDS-L-elsbetiae_contig949:14127..14199Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig949 14128..14199 -
1691683984.6843774-CDS-L-elsbetiae_contig949:14127..141991691683984.6843774-CDS-L-elsbetiae_contig949:14127..14199Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig949 14128..14199 -
1622817015.915048-CDS-L-elsbetiae_contig949:14777..148581622817015.915048-CDS-L-elsbetiae_contig949:14777..14858Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig949 14778..14858 -
1691683984.6944103-CDS-L-elsbetiae_contig949:14777..148581691683984.6944103-CDS-L-elsbetiae_contig949:14777..14858Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig949 14778..14858 -
1622817015.9309442-CDS-L-elsbetiae_contig949:15785..159111622817015.9309442-CDS-L-elsbetiae_contig949:15785..15911Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig949 15786..15911 -
1691683984.7096133-CDS-L-elsbetiae_contig949:15785..159111691683984.7096133-CDS-L-elsbetiae_contig949:15785..15911Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig949 15786..15911 -
1622817015.946337-CDS-L-elsbetiae_contig949:16310..164091622817015.946337-CDS-L-elsbetiae_contig949:16310..16409Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig949 16311..16409 -
1691683984.7188783-CDS-L-elsbetiae_contig949:16310..164091691683984.7188783-CDS-L-elsbetiae_contig949:16310..16409Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig949 16311..16409 -
1622817015.9626677-CDS-L-elsbetiae_contig949:16845..173931622817015.9626677-CDS-L-elsbetiae_contig949:16845..17393Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig949 16846..17393 -
1691683984.732024-CDS-L-elsbetiae_contig949:16845..173931691683984.732024-CDS-L-elsbetiae_contig949:16845..17393Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig949 16846..17393 -
1622817015.9740016-CDS-L-elsbetiae_contig949:17762..179041622817015.9740016-CDS-L-elsbetiae_contig949:17762..17904Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig949 17763..17904 -
1691683984.7421072-CDS-L-elsbetiae_contig949:17762..179041691683984.7421072-CDS-L-elsbetiae_contig949:17762..17904Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig949 17763..17904 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817015.985946-UTR-L-elsbetiae_contig949:17904..179181622817015.985946-UTR-L-elsbetiae_contig949:17904..17918Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig949 17905..17918 -
1691683984.753731-UTR-L-elsbetiae_contig949:17904..179181691683984.753731-UTR-L-elsbetiae_contig949:17904..17918Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig949 17905..17918 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig949.18471.1

>prot_L-elsbetiae_contig949.18471.1 ID=prot_L-elsbetiae_contig949.18471.1|Name=mRNA_L-elsbetiae_contig949.18471.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=589bp
MGTGRGYREEEEPAFDHHPEDPYWAEELLPQYAPSSRREAAAAASRRGER
AGEWEVEGRGRPLPPADLLPEWEHPDARFHEADAGRGRGRGRGRGAGGRG
SRGGRGGGRGLGQHGPYGREASPPHSSAPAMERGWSQDEGFDDGGGGGFQ
EWSAYDESPPRAAAAPPRRAPAAGRGRPAGPLGPRGGGGRGPEQMGLPLG
DPMDRRMPLPPHGGEPFDGDERPTRMRRREARPPPPRELSQDQYYDDQYD
DAGYYPTPGARQPEELLPLPQQRRRVADPYYEHSSPPQHQRARGPPPAHY
QQQHPERLLDKRRYEDAFEDEAMPPRAGGAPQHRPGRRELAGPGEDPRYG
AFDPMQREFPQDGRHGPGPPRGGGGGGAPLPSNGMADPHPDELQQRPRMM
RGDRPPPPQEGGGRPLRGPGPGGYPPMNDGPPPLREDPAYYESGPSQDGP
HPAQQRRDSDLGYGPLGRGGGRGRGAPGGRGLGAPPGGRGAARPRPDDDG
NLPPPGYGYERGPASEPGRGRGRGGRGGRGGRGGPPLQQGRGGGRGGLPP
PEHAAAGQYGRGPPLREHSSSFDDGAIVSPGERGPGGGR
back to top

mRNA from alignment at L-elsbetiae_contig949:13043..17918-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig949.18471.1 ID=mRNA_L-elsbetiae_contig949.18471.1|Name=mRNA_L-elsbetiae_contig949.18471.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4876bp|location=Sequence derived from alignment at L-elsbetiae_contig949:13043..17918- (Laminarionema elsbetiae ELsaHSoW15)
GTGGGCGCGGCGGGATGGGTACCGGGCGCGGCTACCGCGAAGAGGAAGAG
CCTGCGTTTGATCACCACCCGGAGGACCCGTACTGGGCCGAAGAGCTGCT
GCCGCAGTACGCGCCGTCCTCCCGCCGAGAGGCAGCCGCTGCGGCGTCCA
GGAGGGGTGAGATGTCCAGCTACGATAGACGTTTACAAGAGCGCCATAAG
GCAGATGAAGCTTTATCATATGTAAGAACAGGTTGTGTCACAAGTAGAAG
GAGCTTCGTAAATCGTTGTTTAAGAGGTACCGGCCGTAAAGGCACACCTG
ACACAATTACTGTTGATCGATTATTTTGATACATGTCTCCATGGATCCAG
GAGCAGCTGCGCTCTAAGTTCCCGAAGCTGTTTTCACTCTGCCGGGTCCC
AGCATCAGCGGGGCCACGCTAGAGCAAAAAGCCTTTCAGCCCTCGTCTCT
GTTTTCTGTGTGTTTAACCGTCCGCTCCGGCCGTGCACATACACACAACT
TTCGGCCGTCTGCTCTCCCCGTTAGGTGAGAGGGCCGGCGAGTGGGAGGT
CGAGGGGCGAGGAAGACCGCTGCCGCCCGCCGACCTCCTCCCTGAGTGGG
AGCACCCCGACGCCCGCTTCCACGAAGCCGACGCCGGCAGGGGCAGAGGC
AGGGGCCGCGGGCGGGGAGCGGGTGGTCGAGGCAGCCGCGGCGGCCGCGG
CGGCGGTCGCGGACTCGGCCAGCACGGTCCCTACGGGAGGGAAGCGTCCC
CACCGCACTCATCGGCGCCGGCGATGGAGCGGGGGTGGAGCCAGGACGAA
GGCTTCGACGACGGCGGCGGGGGCGGATTCCAAGAGTGGTCGGCGTATGA
CGAGTCTCCGCCGCGAGCGGCAGCTGCTCCTCCGAGGAGGGCCCCGGCGG
CGGGGAGGGGGCGCCCGGCCGGGCCGCTCGGTCCGAGGGGCGGTGGCGGC
CGTGGACCGGAGCAGATGGGACTGCCGTTGGGAGATCCGATGGACCGGCG
CATGCCTCTGCCTCCGCATGGGGGGGAACCCTTCGACGGGGACGAGAGAC
CGACGAGAATGAGGAGGCGTGAGGTGGGTGGGTTGGTGGGTGCGCCTTAT
TTCTTTTGTCAAAACACAACGGGGGTAATGAGTAGTGAGTTGTGGTGTTT
TCGTTTGGTGAGGGTGGGTTTTCACAGTTTTATCCCTCGCTTCTACGTGA
CATGGACCTCGCTCGTGGTTTGCACGACATGAAGGGGTGCGAAGCATTCG
CTCTGGAGGCAGGCATGTGAAGGTGCGTCTCTCGCATATAAGTTGACAAC
AAGAAATGGTCCCAGGTCTTCTCCCCCCTGATCGTCTCCGCCCTTCACCG
GGTGGTTGCGTTCGTCCTACTGTATGCAGTATGCAGCACCATACCACCCA
ACAGCGGTGCTGACTGCCGTCTGGCCGCAACCGTCTCGTTGTTGTTTCCC
CCCTTGACCCCCCCCCCCGACTTGCGCGTTATCCCCTCGCCTGGCTGTCT
GTGTTGCAGGCGCGACCGCCGCCGCCGCGTGAGCTCTCGCAAGACCAGTA
CTACGACGATCAGTACGACGACGCGGGCTACTACCCAACGCCGGGGGCGA
GGCAACCGGTATGGTATGGGGATGGTTGTTCGTCTGTTGTTGCCAGCTTG
TTTCGGCATTTCGCTGCGCGAGCCGAACAACAGTGTGATGACGCGGGTGG
CGTAGATTAGCTTGGCCTGAGCCATTGCGCGGGAGACGCTGCACGACGCG
CATGGTTGAGAAAGAGGAAAGACGGGCCGAGCGGTCGAGAGGGAGAGATA
ACCAAAACACATGGAAGACAAGCACACGCACACGCACGGGCGCGCGAACG
ACCCTCACTCGGGCTGGAAGCGTTTGCTCTGCCCCTTCTTCTCCCTCCAC
TGCGCATCCCGTGGGTTTATCGAAGACTTTCAGATGTAGGTGTAGGCGGT
TTACTCGTGCGACTTGAAAGCCTCGCCACATCTTGTCGGGTTTTGTTAAC
TTTGTAGGAGGAGCTCCTGCCACTCCCGCAGCAGCGTCGTCGCGTCGCCG
ACCCGTACTACGAGCACAGCTCGCCCCCTCAGCATCAGCGGGCGAGGGGG
CCACCGCCTGCCCACTATCAGCAGCAGCACCCGGTGAGCACGCGCTACGT
ACGTGGCTGCTGCCGCTGCTGCTGCACAAGAGCAGGAGTCTCTAAAGTAC
TGCCCGTGTGCCGAGGAAGGGCTTGTTTTTCATTCGGAGATTTCGGAGAT
TTCGGAGATTTTGGAGATCTTTGGGTCGGCTTTGAAAAACACACTTCTCT
ACCGATTGTATGTATGTAGCTGAGATGTTGTTGTTGTTGTTTCTCACATT
AGCTCTCTAGTCCAAAACATCCTTGGGTGCCCGTGGTCACAAAACAAGGC
GAACCCGGTTTATGTATTTGTTCCTCGTTTTTTTTTTGCGGCGTGGCTAG
ATCGGGAACGGCACCCCCTCTCGTGGTGGTGGGGTTTCAAACATTTTGAA
CAGAGTCTCCGTGTGTTGTGCGTTGAACCAATGGCTCGTACTTGTACTTG
TTGCTGTGTACCATTGTTGCCGCGTTCGTGATCGCGCATTCGAGCATTGC
AGGGGCGCCGTTGCATCACGGCCGAAGTTTTCACACGCAACACCTACGAC
TTCGTCCAAGATTATGTTTTGAGCACAATCTGGACGAGCGCACCTCGATC
TAATTCACGCGGGCCCCCTCTCCCCCCCCCCCCCCCCCCCCACCCCCCCC
CCCCCCCCCCCCCCCCCCCACCCACCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCGNNNNNNNNNCACCTAAGACATCCCCCCTTATTTTT
TTTTTGGAGGAATGTGGGGGGGGGGTCCTTGTTTTTTTTTCCCCCGGGCC
CCCCCCCCCCCCCCCCCCCCACCCATGTACCAGACAAGCATCGGTGCCAT
GCTGTCGACCTGCTGGCGCCCTAAGCCCTTCCGCCTTCGCCCTGCAACCG
CCTTGCAACTGCCTTTGTGTGCATCCAATTTTTTCTTTTGGTCTTACGCT
CTGTTTCTAGGAGAGACTGCTGGACAAACGGCGGTACGAGGATGCCTTCG
AGGACGAGGCGATGCCTCCGAGGGCGGGGGGCGCGCCACAGGTGAGAGAT
ATGTATTCGTCGATCATGCCCTCGGATGCGTATCTTCTTGATGACGTGAT
TGTCTCAACCAGAGGGTAAAACGCAACACACCTAACCGTTCACGTTCACG
CGAGGCTCTCCTTCTTCACCATCGTTTTCGAACACCATGGCACTGTTCGG
GTTGCAAAAGGGTATAATACCCCTATACACGTGACCCATCCCGTGCTTCT
GAAGCGCACATTTCCGAACGGCGTACCCATGATGTGTCAGGTGTTGTCGT
GCGGTGTGCTTGCTTCCTTCTTTCCTTCCGCACGTTGCGCTCGCGCTTCG
TGTGTTTCTTGCTTCCCCGTACTGTCTCTGTTTGCTGGTGCTGGCCGCCC
CCCTCTTGTGGAAGAACTGTCTGTCTAGCCTCTTCGCGTTCCCGTCTCTC
TCGATCTTGTTGCGCACCTTCGCCTTTACCTTCGCTGTCGTCGTCGCCGT
TTTGGGGGTCTCCGTAACTCTTGGGCCGTGTTCTCCCCCATCCCCTCTCT
TTCGGAACCTGACGCCATCTCGATCGATCCGATCAACCGCCGTCTTGATG
TGTTGGTGCCGGCGTACAGCATCGGCCTGGCCGTCGAGAGTTGGCTGGAC
CCGGCGAGGATCCTCGTTACGGTGCTTTCGACCCGATGCAGGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTGCACGGCATTGGTGTTCT
GTCGTGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGGTCGGGGGAAATATG
GAGGCGCTACTAACAGTAGGTATACTGTTGCGACAGGGGGGGCAACAAGA
CAACCAACAAGCATTACGACGGGCCGTGCTGCGAGGGGGTATGCTCGCGG
TGTGTGGACTTTCGATGTATAGACACATCAGAAAATGACATCGACCTTAT
GTTAGAGATGACGACATGGACACATAGACATATTGGCGGCGATTTCAAAT
CCCACTCTTTACCCCCGCCCGGTGTTCCGAAAACACGACCCGCTCATTGT
TGTACCTGTTCTGTTGGCCCGAAACAGCGCGAGTTCCCCCAGGATGGTCG
ACACGGCCCGGGGCCCCCGCGAGGCGGTGGCGGCGGCGGCGCCCCCCTCC
CAAGCAACGGCATGGCAGACCCTCACCCCGACGAGCTTCAGCAGCGCCCG
CGGATGATGAGAGGCGACCGCCCCCCGCCACCCCAAGAAGGCGGCGGCCG
ACCCCTCCGTGGCCCCGGTCCCGGCGGGTACCCGCCGATGAACGACGGGC
CTCCGCCTCTGCGCGAAGACCCCGCGTACTACGAGAGTGGGCCGTCTCAA
GATGGGCCCCACCCAGCCCAGCAGCGGCGGGATTCAGACTTGGGGTACGG
TCCCCTCGGGAGAGGAGGGGGACGAGGACGAGGGGCGCCGGGTGGGCGTG
GCCTAGGCGCCCCCCCGGGAGGCCGCGGGGCGGCGCGGCCGAGGCCCGAT
GACGACGGCAACCTGCCGCCGCCGGGGTACGGGTACGAGCGTGGCCCGGC
GTCAGAGCCCGGTAGAGGACGAGGCAGAGGAGGGCGCGGAGGGCGCGGAG
GGCGCGGAGGGCCCCCTTTACAGCAGGGGCGCGGCGGCGGCCGGGGCGGC
TTGCCGCCCCCCGAGCACGCTGCTGCCGGCCAGTACGGCAGAGGTCCGCC
GCTGCGGGAGCACTCGAGCTCTTTCGACGACGGAGCGATAGTGAGTCCCG
GCGAGAGAGGTCCCGGAGGAGGTAGG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig949:13043..17918-

>mRNA_L-elsbetiae_contig949.18471.1 ID=mRNA_L-elsbetiae_contig949.18471.1|Name=mRNA_L-elsbetiae_contig949.18471.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3534bp|location=Sequence derived from alignment at L-elsbetiae_contig949:13043..17918- (Laminarionema elsbetiae ELsaHSoW15)
ATGGGTACCGGGCGCGGCTACCGCGAAGAGGAAGAGCCTGCGTTTGATCA
CCACCCGGAGGACCCGTACTGGGCCGAAGAGCTGCTGCCGCAGTACGCGC
CGTCCTCCCGCCGAGAGGCAGCCGCTGCGGCGTCCAGGAGGGATGGGTAC
CGGGCGCGGCTACCGCGAAGAGGAAGAGCCTGCGTTTGATCACCACCCGG
AGGACCCGTACTGGGCCGAAGAGCTGCTGCCGCAGTACGCGCCGTCCTCC
CGCCGAGAGGCAGCCGCTGCGGCGTCCAGGAGGGGTGAGAGGGCCGGCGA
GTGGGAGGTCGAGGGGCGAGGAAGACCGCTGCCGCCCGCCGACCTCCTCC
CTGAGTGGGAGCACCCCGACGCCCGCTTCCACGAAGCCGACGCCGGCAGG
GGCAGAGGCAGGGGCCGCGGGCGGGGAGCGGGTGGTCGAGGCAGCCGCGG
CGGCCGCGGCGGCGGTCGCGGACTCGGCCAGCACGGTCCCTACGGGAGGG
AAGCGTCCCCACCGCACTCATCGGCGCCGGCGATGGAGCGGGGGTGGAGC
CAGGACGAAGGCTTCGACGACGGCGGCGGGGGCGGATTCCAAGAGTGGTC
GGCGTATGACGAGTCTCCGCCGCGAGCGGCAGCTGCTCCTCCGAGGAGGG
CCCCGGCGGCGGGGAGGGGGCGCCCGGCCGGGCCGCTCGGTCCGAGGGGC
GGTGGCGGCCGTGGACCGGAGCAGATGGGACTGCCGTTGGGAGATCCGAT
GGACCGGCGCATGCCTCTGCCTCCGCATGGGGGGGAACCCTTCGACGGGG
ACGAGAGACCGACGAGAATGAGGAGGCGTGAGGTGAGAGGGCCGGCGAGT
GGGAGGTCGAGGGGCGAGGAAGACCGCTGCCGCCCGCCGACCTCCTCCCT
GAGTGGGAGCACCCCGACGCCCGCTTCCACGAAGCCGACGCCGGCAGGGG
CAGAGGCAGGGGCCGCGGGCGGGGAGCGGGTGGTCGAGGCAGCCGCGGCG
GCCGCGGCGGCGGTCGCGGACTCGGCCAGCACGGTCCCTACGGGAGGGAA
GCGTCCCCACCGCACTCATCGGCGCCGGCGATGGAGCGGGGGTGGAGCCA
GGACGAAGGCTTCGACGACGGCGGCGGGGGCGGATTCCAAGAGTGGTCGG
CGTATGACGAGTCTCCGCCGCGAGCGGCAGCTGCTCCTCCGAGGAGGGCC
CCGGCGGCGGGGAGGGGGCGCCCGGCCGGGCCGCTCGGTCCGAGGGGCGG
TGGCGGCCGTGGACCGGAGCAGATGGGACTGCCGTTGGGAGATCCGATGG
ACCGGCGCATGCCTCTGCCTCCGCATGGGGGGGAACCCTTCGACGGGGAC
GAGAGACCGACGAGAATGAGGAGGCGTGAGGCGCGACCGCCGCCGCCGCG
TGAGCTCTCGCAAGACCAGTACTACGACGATCAGTACGACGACGCGGGCT
ACTACCCAACGCCGGGGGCGAGGCAACCGGCGCGACCGCCGCCGCCGCGT
GAGCTCTCGCAAGACCAGTACTACGACGATCAGTACGACGACGCGGGCTA
CTACCCAACGCCGGGGGCGAGGCAACCGGAGGAGCTCCTGCCACTCCCGC
AGCAGCGTCGTCGCGTCGCCGACCCGTACTACGAGCACAGCTCGCCCCCT
CAGCATCAGCGGGCGAGGGGGCCACCGCCTGCCCACTATCAGCAGCAGCA
CCCGGAGGAGCTCCTGCCACTCCCGCAGCAGCGTCGTCGCGTCGCCGACC
CGTACTACGAGCACAGCTCGCCCCCTCAGCATCAGCGGGCGAGGGGGCCA
CCGCCTGCCCACTATCAGCAGCAGCACCCGGAGAGACTGCTGGACAAACG
GCGGTACGAGGATGCCTTCGAGGACGAGGCGATGCCTCCGAGGGCGGGGG
GCGCGCCACAGGAGAGACTGCTGGACAAACGGCGGTACGAGGATGCCTTC
GAGGACGAGGCGATGCCTCCGAGGGCGGGGGGCGCGCCACAGCATCGGCC
TGGCCGTCGAGAGTTGGCTGGACCCGGCGAGGATCCTCGTTACGGTGCTT
TCGACCCGATGCAGCATCGGCCTGGCCGTCGAGAGTTGGCTGGACCCGGC
GAGGATCCTCGTTACGGTGCTTTCGACCCGATGCAGCGCGAGTTCCCCCA
GGATGGTCGACACGGCCCGGGGCCCCCGCGAGGCGGTGGCGGCGGCGGCG
CCCCCCTCCCAAGCAACGGCATGGCAGACCCTCACCCCGACGAGCTTCAG
CAGCGCCCGCGGATGATGAGAGGCGACCGCCCCCCGCCACCCCAAGAAGG
CGGCGGCCGACCCCTCCGTGGCCCCGGTCCCGGCGGGTACCCGCCGATGA
ACGACGGGCCTCCGCCTCTGCGCGAAGACCCCGCGTACTACGAGAGTGGG
CCGTCTCAAGATGGGCCCCACCCAGCCCAGCAGCGGCGGGATTCAGACTT
GGGGTACGGTCCCCTCGGGAGAGGAGGGGGACGAGGACGAGGGGCGCCGG
GTGGGCGTGGCCTAGGCGCCCCCCCGGGAGGCCGCGGGGCGGCGCGGCCG
AGGCCCGATGACGACGGCAACCTGCCGCCGCCGGGGTACGGGTACGAGCG
TGGCCCGGCGTCAGAGCCCGGTAGAGGACGAGGCAGAGGAGGGCGCGGAG
GGCGCGGAGGGCGCGGAGGGCCCCCTTTACAGCAGGGGCGCGGCGGCGGC
CGGGGCGGCTTGCCGCCCCCCGAGCACGCTGCTGCCGGCCAGTACGGCAG
AGGTCCGCCGCTGCGGGAGCACTCGAGCTCTTTCGACGACGGAGCGATAG
TGAGTCCCGGCGAGAGAGGTCCCGGAGGAGGTAGGCGCGAGTTCCCCCAG
GATGGTCGACACGGCCCGGGGCCCCCGCGAGGCGGTGGCGGCGGCGGCGC
CCCCCTCCCAAGCAACGGCATGGCAGACCCTCACCCCGACGAGCTTCAGC
AGCGCCCGCGGATGATGAGAGGCGACCGCCCCCCGCCACCCCAAGAAGGC
GGCGGCCGACCCCTCCGTGGCCCCGGTCCCGGCGGGTACCCGCCGATGAA
CGACGGGCCTCCGCCTCTGCGCGAAGACCCCGCGTACTACGAGAGTGGGC
CGTCTCAAGATGGGCCCCACCCAGCCCAGCAGCGGCGGGATTCAGACTTG
GGGTACGGTCCCCTCGGGAGAGGAGGGGGACGAGGACGAGGGGCGCCGGG
TGGGCGTGGCCTAGGCGCCCCCCCGGGAGGCCGCGGGGCGGCGCGGCCGA
GGCCCGATGACGACGGCAACCTGCCGCCGCCGGGGTACGGGTACGAGCGT
GGCCCGGCGTCAGAGCCCGGTAGAGGACGAGGCAGAGGAGGGCGCGGAGG
GCGCGGAGGGCGCGGAGGGCCCCCTTTACAGCAGGGGCGCGGCGGCGGCC
GGGGCGGCTTGCCGCCCCCCGAGCACGCTGCTGCCGGCCAGTACGGCAGA
GGTCCGCCGCTGCGGGAGCACTCGAGCTCTTTCGACGACGGAGCGATAGT
GAGTCCCGGCGAGAGAGGTCCCGGAGGAGGTAGG
back to top