prot_L-elsbetiae_contig949.18471.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig949.18471.1
Unique Nameprot_L-elsbetiae_contig949.18471.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length589
Homology
BLAST of mRNA_L-elsbetiae_contig949.18471.1 vs. uniprot
Match: A0A6H5L932_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L932_9PHAE)

HSP 1 Score: 233 bits (593), Expect = 6.460e-62
Identity = 254/510 (49.80%), Postives = 279/510 (54.71%), Query Frame = 0
Query:   13 PAFDHHPEDPYWAEELLPQYAP--SSRREAAAAASRRGERAGEWEVEGRGRPLPPADLLPEWEHPDARFHEADA-GRXXXXXXXXXXXGRGSRGXXXXXXXLGQHGPYGREASPPHSSAPAMERGWSQDEGFDDG------------------GGGGFQEWSAYDESPPRAAAAXXXRAP-----AAGRGRPAGPLGPRGGGGRGPEQMGLPLGDPMDRRMPLPPHGGEPFDGDERPTRMRRREAXXXXXXXXXXXXXXXXXXXXXXXXXTPGARQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPERLLDKRRYEDAFEDEAMPPRAGGAPQHRPGRRELAGPGEDPRYGA-FDPMQREFPQDGRHGPGPPRGGXXXXAPLPSNGMADPHPDELQQRPRMMRGDRPPPPQEGGGRPLRG--PGPGGYPPMNDGPPPLREDPAYYESG-PSQDGPH-----------PAQQRRDSDL-----GYGPLGRGGGRGRGA 476
            P  +HHPEDPYW EELLPQYAP  SSRREAAA   RRGE   EWE EGRGRPLPPA+LLPEWE  D RFH+ +A G  XXXXXXXXXX    R XXXXXXX    GP G + +      P  ERGW  DEG                      GG GFQEWSA+DESPPRAA     RAP       GRG P           RGP +MG P G+  +R MP  PHG E +DG ERP RMRRREA  XXXXXXXX                 G RQP           XXXXXXXXXXXXXXXXXXXX         HPER+ DKRRYEDAFEDE M    G   ++RP  RE  GPG+DPR+G+  DP Q +F Q+ R+  GPPRG              + +P    QRPRMMR  RPP  QEGG  P  G  PG G Y PM DG    R DP YY+ G PS+ G             P   RRD DL     G  P+   GGRG GA
Sbjct: 1155 PFDEHHPEDPYWGEELLPQYAPLPSSRREAAA--GRRGE---EWEGEGRGRPLPPAELLPEWEDSDPRFHDPEARGGRXXXXXXXXXXXXXXRXXXXXXXXHAPFGPPGEDLA-----LPPGERGWGPDEGXXXXXXXXXXXXXXXXXXXXADGGSGFQEWSAFDESPPRAA--PPRRAPMGAPAGGGRGHPXXXXPXXXXXXRGPGRMGPPQGEHPERGMP--PHG-EYYDGAERPLRMRRREARPXXXXXXXXDQYEDAGYYPPR-----GPRQPEELMPQARRASXXXXXXXXXXXXXXXXXXXXQ--------HPERMPDKRRYEDAFEDEPM---RGPPLRNRPDPREFTGPGDDPRHGSGLDPQQYDFRQEDRYAQGPPRGSGGRGPXXXXXXXXEHYPGGPPQRPRMMRDGRPP--QEGG--PPHGVRPGGGDYLPMQDGXXXSRGDPGYYDGGGPSRGGXXXGRGELHLGVPPGDLRRDPDLRLPAAGRVPMPGPGGRGPGA 1629          
BLAST of mRNA_L-elsbetiae_contig949.18471.1 vs. uniprot
Match: D8LEF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEF1_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 6.920e-17
Identity = 126/234 (53.85%), Postives = 138/234 (58.97%), Query Frame = 0
Query:  174 GRGRPAGPLGPRGGGGRGPEQMGLPLGDPMDRRMPLPPHGGEPFDGDERPTRMRRREAXXXXXXXXXXXXXXXXXXXXXXXXXTPGARQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPERLLDKRRYEDAFEDEAMPPRAGGAPQHRPGRRELAGPGEDPRYGA-FDPMQREFPQDGRHGPGPPRGGXXXXAPLPSNGMADPHPDELQQRPRMMRGDRPP 406
            GRG PAG         RGP +MG P G+  +R MP  PHG E +DG ERP RMRRREA XXXXXXXXXXXXXXXX          G RQP          XXXXXXXXXXXXXXXXXXXXX         HPER+ DKRRYED FEDE M    G   ++RP  RE AGPG++PR G  FDP Q +F Q+ R+  GPPR  XXXX                 QRPRMMR  RPP
Sbjct:    8 GRGHPAGXXPGXXXXXRGPGRMGPPPGEHPERGMP--PHG-EYYDGAERPLRMRRREARXXXXXXXXXXXXXXXXYYPPR-----GPRQPEELMPQARRAXXXXXXXXXXXXXXXXXXXXXQ--------HPERMPDKRRYEDTFEDEPM---RGPPLRNRPDPREFAGPGDEPRRGGGFDPQQHDFCQEDRYAQGPPRXXXXXXXXXXXXXXXXXXXXXXXQRPRMMRDGRPP 222          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig949.18471.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L932_9PHAE6.460e-6249.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEF1_ECTSI6.920e-1753.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig949contigL-elsbetiae_contig949:13043..17904 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig949.18471.1mRNA_L-elsbetiae_contig949.18471.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig949 13043..17918 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig949.18471.1 ID=prot_L-elsbetiae_contig949.18471.1|Name=mRNA_L-elsbetiae_contig949.18471.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=589bp
MGTGRGYREEEEPAFDHHPEDPYWAEELLPQYAPSSRREAAAAASRRGER
AGEWEVEGRGRPLPPADLLPEWEHPDARFHEADAGRGRGRGRGRGAGGRG
SRGGRGGGRGLGQHGPYGREASPPHSSAPAMERGWSQDEGFDDGGGGGFQ
EWSAYDESPPRAAAAPPRRAPAAGRGRPAGPLGPRGGGGRGPEQMGLPLG
DPMDRRMPLPPHGGEPFDGDERPTRMRRREARPPPPRELSQDQYYDDQYD
DAGYYPTPGARQPEELLPLPQQRRRVADPYYEHSSPPQHQRARGPPPAHY
QQQHPERLLDKRRYEDAFEDEAMPPRAGGAPQHRPGRRELAGPGEDPRYG
AFDPMQREFPQDGRHGPGPPRGGGGGGAPLPSNGMADPHPDELQQRPRMM
RGDRPPPPQEGGGRPLRGPGPGGYPPMNDGPPPLREDPAYYESGPSQDGP
HPAQQRRDSDLGYGPLGRGGGRGRGAPGGRGLGAPPGGRGAARPRPDDDG
NLPPPGYGYERGPASEPGRGRGRGGRGGRGGRGGPPLQQGRGGGRGGLPP
PEHAAAGQYGRGPPLREHSSSFDDGAIVSPGERGPGGGR
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