prot_L-elsbetiae_contig9414.18409.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9414.18409.1
Unique Nameprot_L-elsbetiae_contig9414.18409.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length304
Homology
BLAST of mRNA_L-elsbetiae_contig9414.18409.1 vs. uniprot
Match: A0A6H5JSI9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI9_9PHAE)

HSP 1 Score: 176 bits (446), Expect = 5.290e-50
Identity = 96/217 (44.24%), Postives = 133/217 (61.29%), Query Frame = 0
Query:   86 VTFWTWYTTTAYFCLSCASAYLCWRAIGKRTSNAIVTANNERFG--------------KPVPPLLERLQLVAWNVACVASLIVVTLYWLADYDGSAVGSLDILAHSLVALIMVVDQVLIADEYKMRHVIFTQVYGVAYITFNLLWFCLAPEKYRLLYDIMDWKRKTLVACFYGTVSIIILAPLFSLLHLRIYRHREIIHQNCQERLSAALTQRLAAE 288
            +T WTWY TT YF +S  SA+LCWRAI    ++  V   +  F               +PVP  L  LQL  W+ AC+ SLIVV+++W A YDG  + ++D  AH  VA IM++DQ L+ADE+K+R+V+F Q +GV YI FN+ W+ LAP+  RL+Y I+DW+  TL AC Y   +I++ APLF L+H  I+R RE ++ N   R S A  +  A E
Sbjct:   59 LTHWTWYATTTYFVVSALSAFLCWRAIAVTVASGPVRDGDPAFDAPTSSRPSDRTGSPQPVPAALRHLQLALWSTACIVSLIVVSIFWGALYDGDKLTTVDEQAHVFVACIMLLDQFLVADEFKLRYVLFPQAFGVIYIFFNVGWYYLAPDDDRLIYIILDWEDNTLGACIYAFGAILVGAPLFGLVHFGIFRLRERVYHNRLARSSKAAAEAQAIE 275          
BLAST of mRNA_L-elsbetiae_contig9414.18409.1 vs. uniprot
Match: A0A6H5JVA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVA0_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 9.170e-32
Identity = 69/155 (44.52%), Postives = 100/155 (64.52%), Query Frame = 0
Query:  131 PVPPLLERLQLVAWNVACVASLIVVTLYWLADYDGSA---VGSLDILAHSLVALIMVVDQVLIADEYKMRHVIFTQVYGVAYITFNLLWFCLAPEKYRLLY-DIMDWKRKTLVACFYGTVSIIILAPLFSLLHLRIYRHREIIHQNCQERLSAAL 281
            PVP  L  LQLV WN+AC+ASL+V  ++   DY       V + D+ AH LVA  M+VDQ+LIAD YK+ H+IFTQ+YG+ Y+ F+++WF   PE  + LY D +DW    L AC  G V++ +L P+  LLHL ++R RE +++  +++  A L
Sbjct:   92 PVPRGLRWLQLVLWNIACIASLLVTFVWATEDYVRQVRQGVKNFDVQAHGLVAFFMLVDQLLIADTYKLGHMIFTQIYGLVYLAFSVVWFYNGPEDEKYLYEDTLDWDENRLQACLSGGVAVGVLVPIAGLLHLGVFRLREALYRRVRDKEIATL 246          
BLAST of mRNA_L-elsbetiae_contig9414.18409.1 vs. uniprot
Match: D7G734_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G734_ECTSI)

HSP 1 Score: 122 bits (307), Expect = 7.320e-31
Identity = 67/163 (41.10%), Postives = 101/163 (61.96%), Query Frame = 0
Query:  130 KPVPPLLERLQLVAWNVACVASLIVVTLYWLADYDGSAVGSLDILAHSLVALIMVVDQVLIADEYKMRHVIFTQVYGVAYITFNLLWFCLAPEKYRLLYDIMDWKRKTLVACFYGTVSIIILAPLFSLLHLRIYRHREIIHQNCQERLSAALTQRLAAEQESM 292
            +PVP +L  LQLV W+ AC+ SLIVVT++W A                     +++DQ L+ADE+K+R+++F Q +GV Y+ FN+ W+ LAP+  RL+Y I+DW+  TL AC Y   +I++ APLF L+HL ++R RE ++ N       A T + AAE +S+
Sbjct:   13 QPVPAVLRHLQLVLWSTACIGSLIVVTIFWGA---------------------LLLDQFLVADEFKLRYILFPQAFGVIYLFFNVGWYYLAPDDDRLIYIILDWEDNTLGACIYAFGAILVGAPLFGLVHLGLFRLRESVYHN-----RLARTSKAAAEAQSI 149          
BLAST of mRNA_L-elsbetiae_contig9414.18409.1 vs. uniprot
Match: D7FX10_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX10_ECTSI)

HSP 1 Score: 122 bits (307), Expect = 1.800e-30
Identity = 65/144 (45.14%), Postives = 93/144 (64.58%), Query Frame = 0
Query:  131 PVPPLLERLQLVAWNVACVASLIVVTLYWLADYDGSA---VGSLDILAHSLVALIMVVDQVLIADEYKMRHVIFTQVYGVAYITFNLLWFCLAPEKYRLLY-DIMDWKRKTLVACFYGTVSIIILAPLFSLLHLRIYRHREIIH 270
            PVP  L  LQLV WN+AC+ASL+V  ++   DY         + D+ AH LVA  M+VDQ+LIAD +K+ H+IFTQ+YG+ Y+ F+++WF   PE  + LY D +DW    L AC  G V++ +L P+  LLHL ++R RE ++
Sbjct:   10 PVPRGLRWLQLVLWNIACIASLLVTFVWASEDYVRQVRQGTKNFDVQAHGLVAFFMLVDQLLIADTFKLGHMIFTQIYGLVYLAFSVIWFYKGPEDEKYLYEDTLDWGENRLQACLSGGVAVGVLVPIAGLLHLVVFRLREALY 153          
BLAST of mRNA_L-elsbetiae_contig9414.18409.1 vs. uniprot
Match: D7G736_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G736_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 1.220e-29
Identity = 75/218 (34.40%), Postives = 116/218 (53.21%), Query Frame = 0
Query:   87 TFWTWYTTTAYFCLSCASA---YLCWRAI--GKRTSNAIVTANNERFGK-------------------PVPPLLERLQLVAWNVACVASLIVVTLYWLADYDGSAVGSLDILAHSLVALIMVVDQVLIADEYKMRHVIFTQVYGVAYITFNLLWFCLAPEKYRLLYDIMDWKRKTLVACFYGTVSIIILAPLFSLLHLRIYRHREIIHQNCQERLSAA 280
            T+W WYT TAYF LS A+A   +  W A    +   N      ++R G                    P+   +  +QL  WNVAC+ SL V  +YW + Y G+ + S+D+ AH+L+A +MV DQ+L+A  +++R +   +V+ + Y+ ++LLW+ L  E   L+Y I+DW R    A  Y    I +L P  S+LH  I+R RE I+  C++R  A+
Sbjct:   56 TYWVWYTGTAYFALSFATACAHFRRWSAATQARAPDNGSAGGGSDRPGPSWSNLTGDVSTPALRTRIHPLEQAVLAIQLFTWNVACLGSLFVAIIYWSSLYTGTPITSVDMNAHTLIAFVMVADQMLVATPFRIRDMWKAEVFAITYLVYSLLWYFLEQE---LIYVILDWDRHFWEAFSYSVAGIFVLIPATSVLHYYIFRLRESIYATCRQRAEAS 270          
BLAST of mRNA_L-elsbetiae_contig9414.18409.1 vs. uniprot
Match: A0A6H5JMZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMZ5_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 1.930e-27
Identity = 65/199 (32.66%), Postives = 114/199 (57.29%), Query Frame = 0
Query:   86 VTFWTWYTTTAYFCLSCASAYLCWRAIGK--------RTSNAIVTANNERFGKPVPPLLERL---QLVAWNVACVASLIVVTLYWLADYDGSAVGSLDILAHSLVALIMVVDQVLIADEYKMRHVIFTQVYGVAYITFNLLWFCLAPEKYRLLYDIMDWKRKTLVACFYGTVSIIILAPLFSLLHLRIYRHREIIHQNC 273
            VT+W WY    YF +S A+AY     +G         R ++A+      R  +P+      L   Q+ +WNVACV SL++VT++W+A +D + + S D+ AH L+A +M +DQ+L+A +++ + ++ + ++ + Y+ FN+++F  APE  R++Y  MDW      +  +  V   +L PL  L+H  ++R RE I++ C
Sbjct:   63 VTYWGWYMAAIYFLVSTATAY---SFLGSPMASDGPVRGTHAVAPHRGNR-NQPLSSNRRALLGFQVFSWNVACVGSLVIVTVFWVALFDNTPLTSTDVNAHILIAPVMAIDQLLVATKFERKQMLASFLFSIVYVAFNIVFFLTAPEDERVIYGQMDWGESVGNSAAFAAVVTFVLVPLGGLIHYCVFRLREYIYETC 257          
BLAST of mRNA_L-elsbetiae_contig9414.18409.1 vs. uniprot
Match: D7G735_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G735_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 1.040e-24
Identity = 49/134 (36.57%), Postives = 87/134 (64.93%), Query Frame = 0
Query:  140 QLVAWNVACVASLIVVTLYWLADYDGSAVGSLDILAHSLVALIMVVDQVLIADEYKMRHVIFTQVYGVAYITFNLLWFCLAPEKYRLLYDIMDWKRKTLVACFYGTVSIIILAPLFSLLHLRIYRHREIIHQNC 273
            Q+ +WNVACV SL++VT++W+A +D + + S D+ AH L+A IM +DQ+L+A +++ + ++ +  + + Y+ FN+++F  APE  R++Y  MDW      +  +  V   +L PL  L+H  ++R RE I++ C
Sbjct:   35 QVFSWNVACVGSLVIVTVFWVALFDNTPLTSTDVNAHILIAPIMAIDQLLVATKFERKQMLASFSFSIVYVAFNIIFFLTAPEDERVIYGQMDWGESVGNSAAFAAVVAFVLVPLGGLIHYCVFRLREYIYETC 168          
BLAST of mRNA_L-elsbetiae_contig9414.18409.1 vs. uniprot
Match: D7G733_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G733_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 1.100e-14
Identity = 50/195 (25.64%), Postives = 102/195 (52.31%), Query Frame = 0
Query:   89 WTWYTTTAYFCLSCASAYLCWRAIGKRTSNAIVTANNER------FGKPVPPLLERLQLVAWNVACVASLIVVTLYWLADYDGSAVGSLDILAHSLVALIMVVDQVLIADEYKMRHVIFTQVYGVAYITFNLLWFCLAPEKYRLLYDIMDWKRKTLVACFYGTVSIIILAPLFSLLHLRIYRHREIIHQNCQERL 277
            WT    TAYF +S  S+ LC   + +     +     +R         PVP     LQ ++W + C++S++V++++W+  Y+     +   ++ +++AL+M++DQ LIA E K ++      + V YI +N++++     + R+ +++ DW  +   AC +  + +    P F+ LH+ +YR RE ++ + +  L
Sbjct:   80 WTHMLATAYFVISLISSLLCMAYLSREKPAPVEEGKPKRPPPVKGTRSPVPCYFRWLQHISWVLTCISSMVVLSVFWMTIYESDVPVTSVYVSSTILALLMLLDQFLIATEMKFKYAWLGLYFFVVYIFYNVIYYYEHNVEDRVTFEVFDWDERPGRACLWVFLILAFGVPGFTALHVFVYRLRERMYTSYKHNL 274          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9414.18409.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5JSI9_9PHAE5.290e-5044.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVA0_9PHAE9.170e-3244.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G734_ECTSI7.320e-3141.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FX10_ECTSI1.800e-3045.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G736_ECTSI1.220e-2934.40Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JMZ5_9PHAE1.930e-2732.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G735_ECTSI1.040e-2436.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G733_ECTSI1.100e-1425.64Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039860Protein rolling stonePANTHERPTHR12242:SF1LD06593P-RELATEDcoord: 84..290
NoneNo IPR availablePANTHERPTHR12242UNCHARACTERIZEDcoord: 84..290
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 218..236
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 192..197
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..44
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 198..217
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 173..191
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 70..88
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 141..161
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..69
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 110..140
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 89..109
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 237..258
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 162..172
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 259..303
NoneNo IPR availableTMHMMTMhelixcoord: 198..220
NoneNo IPR availableTMHMMTMhelixcoord: 141..163
NoneNo IPR availableTMHMMTMhelixcoord: 46..68
NoneNo IPR availableTMHMMTMhelixcoord: 173..191
NoneNo IPR availableTMHMMTMhelixcoord: 240..262
NoneNo IPR availableTMHMMTMhelixcoord: 88..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9414contigL-elsbetiae_contig9414:951..5812 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9414.18409.1mRNA_L-elsbetiae_contig9414.18409.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9414 869..6918 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9414.18409.1 ID=prot_L-elsbetiae_contig9414.18409.1|Name=mRNA_L-elsbetiae_contig9414.18409.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=304bp
MYVFVGEGGHRLAERALLSTLCISFRHFLSLKPPSRTVSNGSRTALAAVA
AVTAAALWVCGSCVPAPLLPTTYIHTTPPTPTRPTVTFWTWYTTTAYFCL
SCASAYLCWRAIGKRTSNAIVTANNERFGKPVPPLLERLQLVAWNVACVA
SLIVVTLYWLADYDGSAVGSLDILAHSLVALIMVVDQVLIADEYKMRHVI
FTQVYGVAYITFNLLWFCLAPEKYRLLYDIMDWKRKTLVACFYGTVSIII
LAPLFSLLHLRIYRHREIIHQNCQERLSAALTQRLAAEQESMRHQSHASQ
DFT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039860Rost