prot_L-elsbetiae_contig934.18339.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig934.18339.1
Unique Nameprot_L-elsbetiae_contig934.18339.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length361
Homology
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BLAST of mRNA_L-elsbetiae_contig934.18339.1 vs. uniprot
Match: A0A6H5JU30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU30_9PHAE)

HSP 1 Score: 447 bits (1151), Expect = 3.040e-154
Identity = 254/372 (68.28%), Postives = 281/372 (75.54%), Query Frame = 0 
Query:    1 MAYEALIVIGFGVSLAVVSVALFVAHVKRINAPNRADPTGIVVDIDLGAALAKDEAARNRKASGRKSAGDDCGGKLSGVA--DRGAFALQQQSVDRRRRRPGA-TREGVDEGREDTAVDRVDGATSTIDGTQ--EAPPPTYTASMVLPSPLWAEAFVKYADVKRKQLRSMVKGGEIAAGWEAKWERLSLPRRRKLLEAVREELVHAVSSYVGRDEGLFDAVCPNLSVGVLEEDHRGISGLSRLVRGCLDGKLPEPRSKAFLAVQEALAKASV--------ETTPKDRRAPVRAFLPTFRKLCSSSFCIGALEAIVSGRADGTAGPTVGSVCSALVKTSGSGILMYAFFHGLKQMSASEVADSAGLPAGVGGG 359
            M YEALIV+ FGV+LAV SVALF+AHVKRINAPNRADP G +V +DLGAALAKDEAA                      A     AFALQ     RRRRRP   T      G +      V G     D  Q  EA   +YTA+MVLPSPLWAEA +K+A+VKRK+LRSMVK GEIAAGWEAKWERL  PRRRKLLEAVREELVHAVSSY+GRDE LFD +CP+LS+  LEE+HRGISGLSRLVRGC+DGKLPEPRSKAF+AV++ALA A+         E   KD+R PVRAFLPTFRKLCSSSFCIGALEAIVSGRADG+AGPTVGSVCSALVKT GSG+L++AFFHGLKQMSASEV DSAGLPAGVGGG
Sbjct:    1 MTYEALIVVVFGVALAVASVALFIAHVKRINAPNRADPAGTLVHVDLGAALAKDEAAAXXXXXXXXXXXXXXXXXXDSSAGCSGDAFALQPNGAARRRRRPSVETANRCAHGSQQETAAAV-GTQQPTDTQQPREAGASSYTATMVLPSPLWAEAILKHAEVKRKKLRSMVKSGEIAAGWEAKWERLPRPRRRKLLEAVREELVHAVSSYIGRDEALFDVICPHLSLSALEEEHRGISGLSRLVRGCMDGKLPEPRSKAFVAVRDALAMAATGAAAAAAAENVSKDKRGPVRAFLPTFRKLCSSSFCIGALEAIVSGRADGSAGPTVGSVCSALVKTGGSGVLLFAFFHGLKQMSASEVTDSAGLPAGVGGG 371
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BLAST of mRNA_L-elsbetiae_contig934.18339.1 vs. uniprot
Match: D8LCX7_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCX7_ECTSI)

HSP 1 Score: 420 bits (1079), Expect = 2.780e-143
Identity = 241/358 (67.32%), Postives = 270/358 (75.42%), Query Frame = 0 
Query:    1 MAYEALIVIGFGVSLAVVSVALFVAHVKRINAPNRADPTGIVVDIDLGAALAKDEAARNRKASGRK-------SAGDDCGGKLSGVADRGAFALQQQSVDRRRRRPGA-TREGVDEGREDTAVDRVDGATSTIDGTQ--EAPPPTYTASMVLPSPLWAEAFVKYADVKRKQLRSMVKGGEIAAGWEAKWERLSLPRRRKLLEAVREELVHAVSSYVGRDEGLFDAVCPNLSVGVLEEDHRGISGLSRLVRGCLDGKLPEPRSKAFLAVQEALAKASV--------ETTPKDRRAPVRAFLPTFRKLCSSSFCIGALEAIVSGRADGTAGPTVGSVCSALVKTSGSGILMYAFFHGLKQ 340
            M YEALIVIGFGV+LAV SVALFVAHVKRINAPNRADP G +V +DLGAALAKDEA                 ++ D+  G       R AFALQ     RRR+RP   T     EG +      V G     D  Q  EA   +YTA+MVLPSPLWAEA +K+ADVKRK+LRSMVK GEIAAGWEAKWERL  PR+RKLLEAV+EELVHAVSSY+GRD+ LFDA+CP+LSV  LEE+HRGISGLSRLVRGCLDGKL EPRSKAF AV++ALAKA++        E  PKD+R PVRAFLPTFRKLCSSSFCIGALEAIVSGRADG+AGPTVGSVCSALVKT GSG+L++AFF GLKQ
Sbjct:   33 MTYEALIVIGFGVALAVASVALFVAHVKRINAPNRADPAGTLVHVDLGAALAKDEAXXXXXXXXXXXXXXXXXTSEDNSAG-----CSRDAFALQPNGAARRRKRPSVETANRCAEGSQQETAAAV-GTQQPADTQQAREAGTSSYTATMVLPSPLWAEAILKHADVKRKKLRSMVKSGEIAAGWEAKWERLPRPRKRKLLEAVKEELVHAVSSYIGRDDALFDAICPHLSVSALEEEHRGISGLSRLVRGCLDGKLSEPRSKAFAAVRDALAKAAIGAAAAAAAENVPKDKRGPVRAFLPTFRKLCSSSFCIGALEAIVSGRADGSAGPTVGSVCSALVKTGGSGVLLFAFFLGLKQ 384
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig934.18339.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JU30_9PHAE3.040e-15468.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCX7_ECTSI2.780e-14367.32Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 26..360
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..25
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig934contigL-elsbetiae_contig934:14638..17402 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig934.18339.1mRNA_L-elsbetiae_contig934.18339.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig934 13966..17447 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig934.18339.1 ID=prot_L-elsbetiae_contig934.18339.1|Name=mRNA_L-elsbetiae_contig934.18339.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=361bp
MAYEALIVIGFGVSLAVVSVALFVAHVKRINAPNRADPTGIVVDIDLGAA
LAKDEAARNRKASGRKSAGDDCGGKLSGVADRGAFALQQQSVDRRRRRPG
ATREGVDEGREDTAVDRVDGATSTIDGTQEAPPPTYTASMVLPSPLWAEA
FVKYADVKRKQLRSMVKGGEIAAGWEAKWERLSLPRRRKLLEAVREELVH
AVSSYVGRDEGLFDAVCPNLSVGVLEEDHRGISGLSRLVRGCLDGKLPEP
RSKAFLAVQEALAKASVETTPKDRRAPVRAFLPTFRKLCSSSFCIGALEA
IVSGRADGTAGPTVGSVCSALVKTSGSGILMYAFFHGLKQMSASEVADSA
GLPAGVGGGS*
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