prot_L-elsbetiae_contig9316.18320.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig9316.18320.1
Unique Name	prot_L-elsbetiae_contig9316.18320.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	381

Homology

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BLAST of mRNA_L-elsbetiae_contig9316.18320.1 vs. uniprot
Match: D8LAT0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAT0_ECTSI)

HSP 1 Score: 177 bits (448), Expect = 5.340e-47
Identity = 147/385 (38.18%), Postives = 188/385 (48.83%), Query Frame = 0

Query:    4 EPELAHP-FSRRPSKESVTSTTSKTSSADKAHAKSLRNAGKEAFLTVVREVVEEIAIETADQALQDE-VRMDGLHKRDRPSGDGSSRPHRRPSSHRDPSATAPAIRPGVGPSQDSASGSPFRGGHSNRGGGDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAM-----SASYRNTSVSMEDDERETLLSLLSGAYGQVNDLTDELKAALDKLSDTEKELKSLSRSQSNPQLLPKQPSQSELQSPKDVDMEDADATAATAQDRKPVSKMLSGMFPSDEGAKSTPAAVRQLQVEVQRLRQRNTQAREKEDKYKADISHLQR 381
            EPELAHP FSRR S  S  S++      +KAHAKSLRNAGKEAFLTVVRE V+E+ ++ A++A+++E +RM+ +                                     SQDSA GSPFR   S+R  G                                                                                              X        + S+RNT+ +MEDDERETLL+LL+GAYGQVNDLTDELK +LDKL+DTEKELK+++ + +  Q +P  PS + L          A A   T + R PVSK+L  +FP+DEG +STPAAVRQLQVEVQRLRQRN QA  KE+KYK++I+HL+R
Sbjct:    4 EPELAHPSFSRRASNTSAASSSXXXXXXEKAHAKSLRNAGKEAFLTVVRETVQELGLDAANEAIEEEAIRMEEMQT-----------------------------------SQDSACGSPFRSSTSSRTAGSGRRSSTGGHHGVGVDTAEPSERRRRRHRKSSMAQGEGQSIVAAAMANFGGGVDANPGAIPEEGRVLSRSFQGSDSADPGDDSAAAEAAVGRPAXXXXXXGGEATSFRNTAETMEDDERETLLALLTGAYGQVNDLTDELKISLDKLNDTEKELKAVNAAHAKLQAMPN-PSPTSLNG-----QSGAHAEGVTPK-RSPVSKLLKDVFPNDEGGRSTPAAVRQLQVEVQRLRQRNAQAHSKEEKYKSEIAHLKR 346

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig9316.18320.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig9316.18320.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LAT0_ECTSI	5.340e-47	38.18	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 260..287
None	No IPR available	COILS	Coil	Coil	coord: 348..375

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig9316	contig	L-elsbetiae_contig9316:2716..7575 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig9316.18320.1	mRNA_L-elsbetiae_contig9316.18320.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig9316 1808..7575 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig9316.18320.1 ID=prot_L-elsbetiae_contig9316.18320.1|Name=mRNA_L-elsbetiae_contig9316.18320.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=381bp
MRQEPELAHPFSRRPSKESVTSTTSKTSSADKAHAKSLRNAGKEAFLTVV
REVVEEIAIETADQALQDEVRMDGLHKRDRPSGDGSSRPHRRPSSHRDPS
ATAPAIRPGVGPSQDSASGSPFRGGHSNRGGGDADAPLERRRRRHRNPSM
GQGEGKSIVAAAMATFGGGIGNGGGGGGGGDGGRRDGSREESSRSINGNG
HGGHYRAPSQASASAATSRAIALEQEEQAMSASYRNTSVSMEDDERETLL
SLLSGAYGQVNDLTDELKAALDKLSDTEKELKSLSRSQSNPQLLPKQPSQ
SELQSPKDVDMEDADATAATAQDRKPVSKMLSGMFPSDEGAKSTPAAVRQ
LQVEVQRLRQRNTQAREKEDKYKADISHLQR