prot_L-elsbetiae_contig9313.18313.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9313.18313.1
Unique Nameprot_L-elsbetiae_contig9313.18313.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length306
Homology
BLAST of mRNA_L-elsbetiae_contig9313.18313.1 vs. uniprot
Match: A0A6H5JLN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN2_9PHAE)

HSP 1 Score: 248 bits (632), Expect = 5.390e-76
Identity = 193/324 (59.57%), Postives = 206/324 (63.58%), Query Frame = 0
Query:    1 APVPPAGPDTPAPPLAAXXXXXXXXXXXXXXXXXXXSCRSAAVPSVLADDELWGPPPGARRPYQXXXXXXXXXXXXXXXXXXXXX----VSPPWAGGAGTDELGGDAGATGGPXXVAARGTGPGRMESAAEAXXXXXXXXXXXVAGVLP-GPAAG--------RPTSTPRRKRTSTSGINRERQFDGTVTGGSGS-----SRFGXXXXXXXXXXXXXXXSGPGNGRGGLSKKTLNIVTNLKSHSTDVRSREEMEDLEEEKRLXXXXXXFKENLRQKGDDFDHTIRILLLGDSGVGKTSLMTRFSEDKFAPTMISTAGVDFKVRS 306
            AP P A P+TPAP L A                   S  S  V SVLADDELWGPP GARRP+Q   XXXXXXXXXXXXXX        +SPPW G    D  GG +G             G GR++  A A           V G L  GPAA         R T+TPRRKRTSTSGINRERQFDGTVTGG+       SRFG               SGPGNGRGGLSKKTLNIVTNLKSH+TDVRSREEMEDLEEE   XXXXXX KENLRQKGDDFD TIRILLLGDSGVGKTSLMTRFSEDKFAPT+ISTAGVD+KV++
Sbjct:   37 APAPTAAPNTPAP-LLAGTSTNANSCLNGNGGSSNSSNSSGVVHSVLADDELWGPPAGARRPFQARGXXXXXXXXXXXXXXGAVASRRAISPPWTGNI--DYGGGCSG-------------GAGRVDGGASAAEGDGFREAARVGGGLGLGPAAVAAVTANGVRNTATPRRKRTSTSGINRERQFDGTVTGGTXXXXXXXSRFGRGRRR----------SGPGNGRGGLSKKTLNIVTNLKSHTTDVRSREEMEDLEEEXXXXXXXXXXKENLRQKGDDFDRTIRILLLGDSGVGKTSLMTRFSEDKFAPTLISTAGVDYKVQT 334          
BLAST of mRNA_L-elsbetiae_contig9313.18313.1 vs. uniprot
Match: D7FX24_ECTSI (Rab8C, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX24_ECTSI)

HSP 1 Score: 210 bits (534), Expect = 1.240e-61
Identity = 123/156 (78.85%), Postives = 131/156 (83.97%), Query Frame = 0
Query:  153 TSTPRRKRTSTSGINRERQFDGTVTGGSGSS--RFGXXXXXXXXXXXXXXXSGPGNGRGGLSKKTLNIVTNLKSHSTDVRSREEMEDLEEEKRLXXXXXXFKENLRQKGDDFDHTIRILLLGDSGVGKTSLMTRFSEDKFAPTMISTAGVDFKVRS 306
            T+TPRRKRTSTSGINRERQFDGTVTGG+G +  RFG               SGPGNGRGGLSKKTLNIVTNLKSH+TDVRSREEMEDLE     XXXXXX  ENLRQKGDDFDHTIRILLLGDSGVGKTSLMTRFSEDKFAPT+ISTAGVD+KV++
Sbjct:   33 TATPRRKRTSTSGINRERQFDGTVTGGTGGTGGRFGGGRRR----------SGPGNGRGGLSKKTLNIVTNLKSHTTDVRSREEMEDLEXXXXXXXXXXXXXENLRQKGDDFDHTIRILLLGDSGVGKTSLMTRFSEDKFAPTLISTAGVDYKVQT 178          
BLAST of mRNA_L-elsbetiae_contig9313.18313.1 vs. uniprot
Match: A0A836C8W2_9STRA (Ras family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8W2_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 2.330e-10
Identity = 33/41 (80.49%), Postives = 38/41 (92.68%), Query Frame = 0
Query:  265 TIRILLLGDSGVGKTSLMTRFSEDKFAPTMISTAGVDFKVR 305
            TIRILLLGDSGVGKTSLM R++ED F+P ++STAGVDFKVR
Sbjct:    2 TIRILLLGDSGVGKTSLMLRYTEDHFSPNLLSTAGVDFKVR 42          
BLAST of mRNA_L-elsbetiae_contig9313.18313.1 vs. uniprot
Match: A0A2R5GVA5_9STRA (Ras-related protein Rab-8A n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GVA5_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 2.520e-10
Identity = 33/46 (71.74%), Postives = 41/46 (89.13%), Query Frame = 0
Query:  260 DDFDHTIRILLLGDSGVGKTSLMTRFSEDKFAPTMISTAGVDFKVR 305
            D +DH I+ILLLGDSGVGKTSLM RF++++F P ++STAGVDFKVR
Sbjct:  529 DRYDHHIKILLLGDSGVGKTSLMLRFADNQFQPNLMSTAGVDFKVR 574          
BLAST of mRNA_L-elsbetiae_contig9313.18313.1 vs. uniprot
Match: A0A5B8MUA6_9CHLO (Small rab-related GTPase n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MUA6_9CHLO)

HSP 1 Score: 68.2 bits (165), Expect = 6.160e-10
Identity = 28/51 (54.90%), Postives = 41/51 (80.39%), Query Frame = 0
Query:  255 LRQKGDDFDHTIRILLLGDSGVGKTSLMTRFSEDKFAPTMISTAGVDFKVR 305
            + ++  D+DH I++L++GDSGVGKTSL+ RFSED F  + IST G+DFK++
Sbjct:    1 MARQRQDYDHVIKLLVIGDSGVGKTSLLLRFSEDSFTTSFISTIGIDFKIK 51          
BLAST of mRNA_L-elsbetiae_contig9313.18313.1 vs. uniprot
Match: A0A7L4EWS0_HIRRU (RAB13 protein (Fragment) n=35 Tax=Aves TaxID=8782 RepID=A0A7L4EWS0_HIRRU)

HSP 1 Score: 64.3 bits (155), Expect = 6.210e-10
Identity = 27/45 (60.00%), Postives = 37/45 (82.22%), Query Frame = 0
Query:  262 FDHTIRILLLGDSGVGKTSLMTRFSEDKFAPTMISTAGVDFKVRS 306
            +DH  ++LL+GDSGVGKT L+ RF+ED F+ T IST G+DFK+R+
Sbjct:    6 YDHLFKLLLIGDSGVGKTCLVIRFAEDNFSSTYISTIGIDFKIRT 50          
BLAST of mRNA_L-elsbetiae_contig9313.18313.1 vs. uniprot
Match: A0A7S3PN59_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PN59_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 6.430e-10
Identity = 52/132 (39.39%), Postives = 69/132 (52.27%), Query Frame = 0
Query:  211 LSKKTLNIVTNLKSHS-------TDVRSREEME---------------------DLEEEKRLXXXXXX---------FKENLRQKGDDFDHTIRILLLGDSGVGKTSLMTRFSEDKFAPTMISTAGVDFKVR 305
            LSKKTLNIVTNLK           +V S+EE E                     D  +EK+                  +NL  K +  D+ +++LLLGDSGVGKTSLM RF++++F  +++STAGVDFKVR
Sbjct:   80 LSKKTLNIVTNLKDQVESIGIPVNNVLSQEEFEEEALEAEAVAKAATAANPKASDSGKEKKFNYKSGKATRRTSATKISDNL-MKNEGHDYYVKVLLLGDSGVGKTSLMLRFADNQFQESLMSTAGVDFKVR 210          
BLAST of mRNA_L-elsbetiae_contig9313.18313.1 vs. uniprot
Match: A0A7S2SPF5_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SPF5_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 6.430e-10
Identity = 30/46 (65.22%), Postives = 42/46 (91.30%), Query Frame = 0
Query:  260 DDFDHTIRILLLGDSGVGKTSLMTRFSEDKFAPTMISTAGVDFKVR 305
            +D+D+ +++LLLGDSGVGKTSLM RF++++F P ++STAGVDFKVR
Sbjct:  272 EDYDYHVKVLLLGDSGVGKTSLMLRFADNEFQPNLMSTAGVDFKVR 317          
BLAST of mRNA_L-elsbetiae_contig9313.18313.1 vs. uniprot
Match: A0A7R9U6W6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6W6_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 7.120e-10
Identity = 32/39 (82.05%), Postives = 37/39 (94.87%), Query Frame = 0
Query:  267 RILLLGDSGVGKTSLMTRFSEDKFAPTMISTAGVDFKVR 305
            R+LLLGDSGVGKTSLM R+SEDKFAP ++STAGVDFK+R
Sbjct:  126 RLLLLGDSGVGKTSLMLRYSEDKFAPVLLSTAGVDFKMR 164          
BLAST of mRNA_L-elsbetiae_contig9313.18313.1 vs. uniprot
Match: W7U9Z1_9STRA (Rab family gtpase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U9Z1_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 7.700e-10
Identity = 33/41 (80.49%), Postives = 39/41 (95.12%), Query Frame = 0
Query:  265 TIRILLLGDSGVGKTSLMTRFSEDKFAPTMISTAGVDFKVR 305
            +IRILLLGDSGVGKTSLM R+SE++FAP ++STAGVDFKVR
Sbjct:  105 SIRILLLGDSGVGKTSLMMRYSENEFAPCLLSTAGVDFKVR 145          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9313.18313.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JLN2_9PHAE5.390e-7659.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX24_ECTSI1.240e-6178.85Rab8C, RAB family GTPase n=1 Tax=Ectocarpus silicu... [more]
A0A836C8W2_9STRA2.330e-1080.49Ras family-domain-containing protein n=1 Tax=Tribo... [more]
A0A2R5GVA5_9STRA2.520e-1071.74Ras-related protein Rab-8A n=1 Tax=Hondaea ferment... [more]
A0A5B8MUA6_9CHLO6.160e-1054.90Small rab-related GTPase n=1 Tax=Chloropicon primu... [more]
A0A7L4EWS0_HIRRU6.210e-1060.00RAB13 protein (Fragment) n=35 Tax=Aves TaxID=8782 ... [more]
A0A7S3PN59_9STRA6.430e-1039.39Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A7S2SPF5_9STRA6.430e-1065.22Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A7R9U6W6_9STRA7.120e-1082.05Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
W7U9Z1_9STRA7.700e-1080.49Rab family gtpase n=2 Tax=Monodopsidaceae TaxID=42... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 228..258
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 289..305
score: 30.16
coord: 266..287
score: 43.24
NoneNo IPR availableGENE3D3.40.50.300coord: 233..306
e-value: 2.4E-11
score: 45.1
NoneNo IPR availablePFAMPF08477Roccoord: 267..304
e-value: 6.2E-9
score: 36.1
NoneNo IPR availablePANTHERPTHR24073:SF567RAS-RELATED PROTEIN RAB-15coord: 261..305
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 261..305
NoneNo IPR availablePROSITEPS51419RABcoord: 261..306
score: 10.001
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 262..305

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9313contigL-elsbetiae_contig9313:1228..7695 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9313.18313.1mRNA_L-elsbetiae_contig9313.18313.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9313 1228..7695 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9313.18313.1 ID=prot_L-elsbetiae_contig9313.18313.1|Name=mRNA_L-elsbetiae_contig9313.18313.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=306bp
APVPPAGPDTPAPPLAAAAAGTGTPKHDHNGSSPSPSCRSAAVPSVLADD
ELWGPPPGARRPYQARRSTGGGGGGGGGAATAAAAVSPPWAGGAGTDELG
GDAGATGGPGGVAARGTGPGRMESAAEAAGAAAGLGGEGVAGVLPGPAAG
RPTSTPRRKRTSTSGINRERQFDGTVTGGSGSSRFGGGGGGGGGGGAGRR
RSGPGNGRGGLSKKTLNIVTNLKSHSTDVRSREEMEDLEEEKRLAEEERR
FKENLRQKGDDFDHTIRILLLGDSGVGKTSLMTRFSEDKFAPTMISTAGV
DFKVRS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase