prot_L-elsbetiae_contig93.18296.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig93.18296.1
Unique Nameprot_L-elsbetiae_contig93.18296.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length255
Homology
BLAST of mRNA_L-elsbetiae_contig93.18296.1 vs. uniprot
Match: D7G8U9_ECTSI (Hypothetical leucine rich repeat calmodulin binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8U9_ECTSI)

HSP 1 Score: 265 bits (676), Expect = 1.880e-77
Identity = 198/247 (80.16%), Postives = 215/247 (87.04%), Query Frame = 0
Query:    1 RAALAVLKARRDQKILEWEMALRVQAAWRGRAAKMVVLAMRILLEQARQKAAATTIQSFWRAVRARHLTTIQRAMFKIRQIQGGASKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRHLRSLEHKARPLLLKLDEVTENAARLSERAGLLARTAEPLRAEHITIREELYHIRHTTDKYTDSDKASVNGCRQRFLTKFLQVRLVEVKKNVEGRLDKIDREVIEIEA 247
            RA LA LKARRD KILEWEMAL+VQAAWRGR AKM+V+ MRIL EQARQ AAA TIQSFWRAVRARHL TIQRA+FKIRQ+Q     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   K+HLR+LE KARPLLLKLDE+T+NAA+LSER   +    EPLRAEH+TIREEL+HIRHTTDKYTDSDK  +NGCRQRFLTKFLQVRLVE+K NVE RL+K+D E IEIE 
Sbjct:  744 RAVLAALKARRDLKILEWEMALKVQAAWRGRVAKMMVMTMRILREQARQNAAAITIQSFWRAVRARHLATIQRALFKIRQMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFECKQHLRALESKARPLLLKLDELTQNAAKLSERQRFVVTAVEPLRAEHVTIREELFHIRHTTDKYTDSDK--INGCRQRFLTKFLQVRLVELKANVEERLEKLDAETIEIEV 988          
BLAST of mRNA_L-elsbetiae_contig93.18296.1 vs. uniprot
Match: A0A6H5KKL6_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKL6_9PHAE)

HSP 1 Score: 240 bits (612), Expect = 7.280e-69
Identity = 144/247 (58.30%), Postives = 158/247 (63.97%), Query Frame = 0
Query:    1 RAALAVLKARRDQKILEWEMALRVQAAWRGRAAKMVVLAMRILLEQARQKAAATTIQSFWRAVRARHLTTIQRAMFKIRQIQGGASKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRHLRSLEHKARPLLLKLDEVTENAARLSERAGLLARTAEPLRAEHITIREELYHIRHTTDKYTDSDKASVNGCRQRFLTKFLQVRLVEVKKNVEGRLDKIDREVIEIEA 247
            RA LA LKARRD KILEWEMAL+VQAAWRGR AKM+V+ MRIL EQARQKAAA TIQSFWRAVRARHL TIQRA+FKIRQ+Q GASK                                                                 LKLDE+T NAA+LSER   +A   +PLRAEH+ IREEL+HIRHTTDKYTDSDK  VNGCRQRFLTKFLQVRLVE+K NVE RL+K+D E IEIE 
Sbjct:  677 RAVLAALKARRDLKILEWEMALKVQAAWRGRVAKMMVMTMRILREQARQKAAAITIQSFWRAVRARHLATIQRALFKIRQMQDGASKGECALCVWKGK------------------------------------------------------LKLDELTHNAAKLSERQRFVATAVKPLRAEHVAIREELFHIRHTTDKYTDSDK--VNGCRQRFLTKFLQVRLVELKANVEERLEKLDAEAIEIEV 867          
BLAST of mRNA_L-elsbetiae_contig93.18296.1 vs. uniprot
Match: A0A836CGM1_9STRA (WW domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGM1_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.770e-15
Identity = 126/256 (49.22%), Postives = 153/256 (59.77%), Query Frame = 0
Query:    7 LKARRDQKILEWEMALRVQAAWRGRAAKMVVLAMRI------------------LLEQARQKAAATTIQSFWRAVRARHLTTIQRAMFKIRQIQGGASKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRHLRSLEHKARPLL-----LKLDEVTENAARLSERAGLLARTAEPLRAEHITIREELYHIRHTTDKYTDSDKASVNGCRQRFLTKFLQVRLVEVKKNVEGRLDKID 239
            L+A R ++   W  A+R+Q  WR R A+ V+  M+                   L  Q    AAA TIQSFWRAVR R L+ +Q A+   R+++  A+  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     +R LR++E +ARPLL     L   E  E+AA    RA     T EP R     + EEL H   T D YTDSDK S  G  QRFLTKFLQVRL E++   + +L  ++
Sbjct:  718 LRAARRRESERWRAAVRLQRWWRCRLARTVLAIMKFTHSAAGCGYTEGAAADAELRRQHALGAAAVTIQSFWRAVRGRQLSKLQLALCVARRLRSEAANKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAEARRALRAVESRARPLLQQREALAAREDAESAALRQSRA-----TLEPERLRAQALAEELDHAVVTKDLYTDSDKLS--GVPQRFLTKFLQVRLQELRAASDAKLKALE 966          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig93.18296.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G8U9_ECTSI1.880e-7780.16Hypothetical leucine rich repeat calmodulin bindin... [more]
A0A6H5KKL6_9PHAE7.280e-6958.30WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A836CGM1_9STRA1.770e-1549.22WW domain-containing protein n=1 Tax=Tribonema min... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 228..248
NoneNo IPR availableGENE3D1.20.5.190coord: 84..135
e-value: 8.1E-6
score: 27.5
IPR000048IQ motif, EF-hand binding siteSMARTSM00015iq_5coord: 81..103
e-value: 120.0
score: 4.7
coord: 114..136
e-value: 20.0
score: 11.1
coord: 48..70
e-value: 0.43
score: 19.7
IPR000048IQ motif, EF-hand binding sitePFAMPF00612IQcoord: 51..66
e-value: 0.0013
score: 18.4
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 49..77
score: 6.65
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 115..143
score: 8.114
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 82..111
score: 6.888

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig93contigL-elsbetiae_contig93:880..11614 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig93.18296.1mRNA_L-elsbetiae_contig93.18296.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig93 880..11614 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig93.18296.1 ID=prot_L-elsbetiae_contig93.18296.1|Name=mRNA_L-elsbetiae_contig93.18296.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=255bp
RAALAVLKARRDQKILEWEMALRVQAAWRGRAAKMVVLAMRILLEQARQK
AAATTIQSFWRAVRARHLTTIQRAMFKIRQIQGGASKEIQRVYRGFKGRL
RAKARRRVFESDLGRNAAAMVIERVFRGHKGRERFECKRHLRSLEHKARP
LLLKLDEVTENAARLSERAGLLARTAEPLRAEHITIREELYHIRHTTDKY
TDSDKASVNGCRQRFLTKFLQVRLVEVKKNVEGRLDKIDREVIEIEASPQ
RDYF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS