mRNA_L-elsbetiae_contig9277.18283.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9277.18283.1 vs. uniprot
Match: D8LL12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL12_ECTSI) HSP 1 Score: 100 bits (248), Expect = 1.500e-21 Identity = 58/116 (50.00%), Postives = 77/116 (66.38%), Query Frame = -1 Query: 180 PRIISSSITAS--AMVNREKREALRGAEEGIFDLLAEDLTSVLWAELLKFPLEHAALRGDRSLAQRLVRAGENMGDALHAATRGGHEEIVKDLLDNGASVASKEASWDGRAPLHHA 521 PR S T S A+ N + R AL+GAE FDL +E LT+ WAE+L+FPLE AA +G+ +L Q+L+RAG +MG ALHAA R GH E+V +LL++GA V+ K+ G PL A Sbjct: 3 PRGFFSRHTCSQNALANEQGRRALKGAEGETFDLFSEVLTTHGWAEMLQFPLECAAAQGNVALTQKLLRAGADMGSALHAAVRYGHAEVVTNLLEHGACVSIKDTR--GSTPLQVA 116
BLAST of mRNA_L-elsbetiae_contig9277.18283.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE) HSP 1 Score: 87.0 bits (214), Expect = 1.240e-16 Identity = 47/81 (58.02%), Postives = 58/81 (71.60%), Query Frame = -1 Query: 189 DLLAEDLTSVLWAELLKFPLEHAALRGDRSLAQRLVRAGENMGDALHAATRGGHEEIVKDLLDNGASVASKEASWDGRAPL 431 D + E LTS AELL+ LEHAA +G++ LAQRLVRAG +GDALH A GGH EIV DLL++ AS+A+ + DGR PL Sbjct: 3 DFIFEILTSQQLAELLRALLEHAAAKGNKDLAQRLVRAGAEIGDALHRAVDGGHREIVSDLLESEASLAATD--MDGRTPL 81
BLAST of mRNA_L-elsbetiae_contig9277.18283.1 vs. uniprot
Match: D8LTQ8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTQ8_ECTSI) HSP 1 Score: 68.9 bits (167), Expect = 3.550e-10 Identity = 40/94 (42.55%), Postives = 57/94 (60.64%), Query Frame = -1 Query: 216 SAMVNREKREALRGAEEGIFDL--LAEDLTSVLWAELLKFPLEHAALRGDRSLAQRLVRAGENMGDALHAATRGGHEEIVKDLLDNGASVASKE 491 + +V+ E+R L G E I L L +LT+ +W E L+ P E AA G+ LA L++AG G+ + AA R GH +V +LL +GASVASK+ Sbjct: 5 AVLVSEEQRCMLDGMGEEILQLVSLQNELTAEVWGEWLQVPFERAAAYGEVELATMLLKAGAK-GNGVAAAARNGHRRVVSELLQHGASVASKD 97
BLAST of mRNA_L-elsbetiae_contig9277.18283.1 vs. uniprot
Match: A0A6H5KTD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD7_9PHAE) HSP 1 Score: 63.9 bits (154), Expect = 5.960e-9 Identity = 35/99 (35.35%), Postives = 55/99 (55.56%), Query Frame = -1 Query: 108 VLWAELLKFPLEHAALRGDRSLAQRLVRAGENMGDALHAATRGGHEEIVKDLLDNGASVASKEASWDGRAPLHHAAHRGETKVVQLLLLKGDDKDAIDN 404 V+W E L+ P E AA G+ +A L++AG G+ + +A R GH ++ +LL +GASVASK+ +VV+ LL++G D D+ D+ Sbjct: 2 VVWGEWLQVPFERAAAHGEVHVATVLLKAGAK-GNGVASAARNGHRRVISELLQHGASVASKDR-----------------RVVRTLLIEGADPDSFDS 82
BLAST of mRNA_L-elsbetiae_contig9277.18283.1 vs. uniprot
Match: UPI001BF9A9A8 (uncharacterized protein n=1 Tax=Lentinula edodes TaxID=5353 RepID=UPI001BF9A9A8) HSP 1 Score: 57.8 bits (138), Expect = 2.580e-6 Identity = 40/117 (34.19%), Postives = 54/117 (46.15%), Query Frame = -1 Query: 111 ELLKFPLEHAALRGDRSLAQRLVRAGENMGDA------LHAATRGGHEEIVKDLLDNGASVA--------SKEASWD---------GRAPLHHAAHRGETKVVQLLLLKGDDKDAID 392 E + L AA G++ LA+ + G+ + LHAA GGHE++VK LLD+GA V S E + D G PLH AA G V+ LL++G D D Sbjct: 22 EFPNYDLHSAAASGNQGLAEYALARGQPVNSVVDGVLPLHAACAGGHEQVVKLLLDHGADVNAARLPRRYSNEKNRDSSAPIVGTTGSTPLHFAAANGNKNVIITLLMRGAHADRRD 138
BLAST of mRNA_L-elsbetiae_contig9277.18283.1 vs. uniprot
Match: D7G981_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G981_ECTSI) HSP 1 Score: 57.0 bits (136), Expect = 3.670e-6 Identity = 31/79 (39.24%), Postives = 45/79 (56.96%), Query Frame = -1 Query: 189 LAEDLTSVLWAELLKFPLEHAALRGDRSLAQRLVRAGENMGDALHAATRGGHEEIVKDLLDNGASVASKEASWDGRAPL 425 +AE T WA L + +AA +G L Q+LV+AG +G A+HAA G +++ LL NGAS+ ++DG PL Sbjct: 1 MAETCTPEQWAAWLSAAVVNAADKGKAGLVQKLVKAGAEIGVAMHAAALRGDQDVANSLLQNGASIND---TFDGFTPL 76
BLAST of mRNA_L-elsbetiae_contig9277.18283.1 vs. uniprot
Match: A0A8H5MCG0_9AGAR (Uncharacterized protein n=1 Tax=Gymnopus confluens TaxID=206315 RepID=A0A8H5MCG0_9AGAR) HSP 1 Score: 56.6 bits (135), Expect = 6.380e-6 Identity = 39/117 (33.33%), Postives = 53/117 (45.30%), Query Frame = -1 Query: 111 ELLKFPLEHAALRGDRSLAQRLVRAGENMGDAL------HAATRGGHEEIVKDLLDNGASV------------ASKEAS-----WDGRAPLHHAAHRGETKVVQLLLLKGDDKDAID 392 E + L AA G+ L + + G+ + L HAA GGH+++VK L+D+GA V S+EAS G PLH AA G V+ LLL+G D D Sbjct: 22 EFPNYDLHSAAASGNLGLVEYALARGQPVNSVLDGVLPLHAACSGGHDQVVKLLIDHGADVNAARLPRRYSNEKSREASVPIAGTTGSTPLHFAAAHGNKNVITTLLLRGAHPDRRD 138
BLAST of mRNA_L-elsbetiae_contig9277.18283.1 vs. uniprot
Match: A0A5C3KTB3_9AGAR (Ankyrin (Fragment) n=1 Tax=Coprinopsis marcescibilis TaxID=230819 RepID=A0A5C3KTB3_9AGAR) HSP 1 Score: 53.1 bits (126), Expect = 8.030e-6 Identity = 31/79 (39.24%), Postives = 42/79 (53.16%), Query Frame = -1 Query: 111 LHAATRGGHEEIVKDLLDNGASV------------ASKEAS-----WDGRAPLHHAAHRGETKVVQLLLLKGDDKDAID 296 +HAA+ GGH ++VK L+++GA V +++AS G PLH AA G T+VV LLLL G D D Sbjct: 20 IHAASAGGHPQVVKKLIEHGADVNAPRLPRRYFSDRNRDASAPIVGTSGSTPLHFAAANGNTEVVTLLLLHGAHPDLED 98
BLAST of mRNA_L-elsbetiae_contig9277.18283.1 vs. uniprot
Match: UPI0015FFBC35 (poly [ADP-ribose] polymerase tankyrase-1-like isoform X2 n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0015FFBC35) HSP 1 Score: 55.5 bits (132), Expect = 8.620e-6 Identity = 42/124 (33.87%), Postives = 65/124 (52.42%), Query Frame = -1 Query: 99 AEEGIFDLLAEDLTSVLWAELLKFPLE--HAALRGDRSLAQR--LVRAGENM---GDALHAATRGGHEEIVKDLLDNGASVASKEASWDGRAPLHHAAHRGETKVVQLLLLKGDDKDAIDNREH 449 +E G + +AED+ +L + + +E +AAL + + + G + G AL ATR GH ++V+ LL GASV + S APLH AA +G T++V LL+ G D DN ++ Sbjct: 2 SENGDPNEMAEDVNELLLSAAMDGSVEGVNAALEAGADINYKPGFKQPGNRITSTGTALFNATRDGHVDVVRLLLREGASVVQRFGSL---APLHVAALKGYTEIVDLLVQHGATVDIRDNWDY 122
BLAST of mRNA_L-elsbetiae_contig9277.18283.1 vs. uniprot
Match: UPI0009E25153 (ankyrin-1-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E25153) HSP 1 Score: 55.8 bits (133), Expect = 1.100e-5 Identity = 47/145 (32.41%), Postives = 69/145 (47.59%), Query Frame = -1 Query: 132 ISSSITASAMVNREKREALRGAEEGIFDLLAEDLTSVLWAELLKF------PLEHAALRGDRSLAQRLVRAGE--NMGDALHA----------ATRGGHEEIVKDLLDNGASVASKEASWDGRAPLHHAAHRGETKVVQLLLLKG 512 + SI + N KR L A +AE L V +E + PL HAA + Q L+ AG N AL+A A++ G + + L+ NGA + K S +G++PLH+AA +G TKV++LLL +G Sbjct: 43 LQKSINETVEQNPCKRIGLHQACRDGLPCVAERLIRVSASECNAYDGDGLTPLHHAARGNHVQIIQLLLNAGADINFPAALNAGCAYMTPLICASKFGSLDACRLLIQNGAHITKK--SCNGQSPLHYAARKGHTKVLELLLKEG 185 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9277.18283.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9277.18283.1 >prot_L-elsbetiae_contig9277.18283.1 ID=prot_L-elsbetiae_contig9277.18283.1|Name=mRNA_L-elsbetiae_contig9277.18283.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=181bp MIIPLHHQRIPHIQHPEQYIFPQVPQTCSRLSIASLSSPLSNSNCTTFVSback to top mRNA from alignment at L-elsbetiae_contig9277:271..872+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9277.18283.1 ID=mRNA_L-elsbetiae_contig9277.18283.1|Name=mRNA_L-elsbetiae_contig9277.18283.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=602bp|location=Sequence derived from alignment at L-elsbetiae_contig9277:271..872+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9277:271..872+ >mRNA_L-elsbetiae_contig9277.18283.1 ID=mRNA_L-elsbetiae_contig9277.18283.1|Name=mRNA_L-elsbetiae_contig9277.18283.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1086bp|location=Sequence derived from alignment at L-elsbetiae_contig9277:271..872+ (Laminarionema elsbetiae ELsaHSoW15)back to top |