mRNA_L-elsbetiae_contig9270.18280.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9270.18280.1 vs. uniprot
Match: D7G548_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G548_ECTSI) HSP 1 Score: 142 bits (357), Expect = 1.650e-37 Identity = 69/82 (84.15%), Postives = 70/82 (85.37%), Query Frame = 1 Query: 1 VCGARIENYLLEKQRVVRQAKGERNFHIFYQLCTSGIAAHLELGGPEHFRYLSESGCVSVAGINDHKDFAEVEEVRQRNGVG 246 VCGARIENYLLEKQRVV QAKGERNFHIFYQLCTS IAAHLELG PEHFRYL ESGCVSV GIND KDF EVEE + G G Sbjct: 218 VCGARIENYLLEKQRVVAQAKGERNFHIFYQLCTSEIAAHLELGAPEHFRYLRESGCVSVPGINDQKDFVEVEEAFTKLGFG 299
BLAST of mRNA_L-elsbetiae_contig9270.18280.1 vs. uniprot
Match: A0A6H5KSK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSK5_9PHAE) HSP 1 Score: 139 bits (351), Expect = 1.190e-36 Identity = 68/82 (82.93%), Postives = 69/82 (84.15%), Query Frame = 1 Query: 1 VCGARIENYLLEKQRVVRQAKGERNFHIFYQLCTSGIAAHLELGGPEHFRYLSESGCVSVAGINDHKDFAEVEEVRQRNGVG 246 VCGARIENYLLEKQRVV QAKGERNFHIFYQLC S IAAHLELG PEHFRYL ESGCVSV GIND KDF EVEE + G G Sbjct: 280 VCGARIENYLLEKQRVVAQAKGERNFHIFYQLCMSEIAAHLELGAPEHFRYLRESGCVSVPGINDQKDFVEVEEAFTKLGFG 361
BLAST of mRNA_L-elsbetiae_contig9270.18280.1 vs. uniprot
Match: A0A836C908_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C908_9STRA) HSP 1 Score: 115 bits (287), Expect = 5.190e-28 Identity = 55/82 (67.07%), Postives = 63/82 (76.83%), Query Frame = 1 Query: 1 VCGARIENYLLEKQRVVRQAKGERNFHIFYQLCTSG-IAAHLELGGPEHFRYLSESGCVSVAGINDHKDFAEVEEVRQRNGV 243 +CGARIENYLLEKQRVV QAKGERN+H+FYQLC S +A L LG PEHFRYL SGC +V GI+D +DF EVEE G+ Sbjct: 383 ICGARIENYLLEKQRVVAQAKGERNYHVFYQLCASATVAPSLALGAPEHFRYLRASGCTAVPGIDDARDFREVEEALDALGL 464
BLAST of mRNA_L-elsbetiae_contig9270.18280.1 vs. uniprot
Match: A0A507CEC0_9FUNG (Non-specific serine/threonine protein kinase n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507CEC0_9FUNG) HSP 1 Score: 90.5 bits (223), Expect = 2.320e-19 Identity = 43/83 (51.81%), Postives = 58/83 (69.88%), Query Frame = 1 Query: 7 GARIENYLLEKQRVVRQAKGERNFHIFYQLCTSGIAAH---LELGGPEHFRYLSESGCVSVAGINDHKDFAEVEEVRQRNGVG 246 G +I +YLLEK RVV+Q GERNFHIFYQ+ +A L+L GPE++RYL++S CV V+G+ND DF EV + + G+G Sbjct: 723 GGKILDYLLEKSRVVQQQSGERNFHIFYQILAGSSSAEKSQLQLFGPEYYRYLNQSNCVKVSGVNDASDFKEVRDAMKSVGLG 805
BLAST of mRNA_L-elsbetiae_contig9270.18280.1 vs. uniprot
Match: A0A7R9UA42_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UA42_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 2.750e-18 Identity = 40/72 (55.56%), Postives = 50/72 (69.44%), Query Frame = 1 Query: 1 VCGARIENYLLEKQRVVRQAKGERNFHIFYQLCTSGIAAHLELGGPEHFRYLSESGCVSVAGINDHKDFAEV 216 +CG +IENYLLEK RV Q GERNFHIFYQLC + LG P FRYL++SGC +V ++D DF++V Sbjct: 289 ICGCKIENYLLEKCRVTFQQAGERNFHIFYQLCKARQGEQYGLGDPTWFRYLNQSGCTTVRNVDDVDDFSKV 360
BLAST of mRNA_L-elsbetiae_contig9270.18280.1 vs. uniprot
Match: A0A2R5GW22_9STRA (Myosin-11 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GW22_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 1.320e-17 Identity = 38/81 (46.91%), Postives = 55/81 (67.90%), Query Frame = 1 Query: 1 VCGARIENYLLEKQRVVRQAKGERNFHIFYQLCTSGIAAHLELGGPEHFRYLSESGCVSVAGINDHKDFAEVEEVRQRNGV 243 + GARI+N+LLEK RVVRQ +GERN+H+FYQL TS + LG E F YL+ SGC +V G++D ++ + + + G+ Sbjct: 419 ISGARIDNFLLEKSRVVRQGRGERNYHVFYQLLTSNRVSEFGLGSMESFAYLNGSGCYTVDGVDDRNEYQVLLQAFEEMGI 499
BLAST of mRNA_L-elsbetiae_contig9270.18280.1 vs. uniprot
Match: L8H9I8_ACACA (Myosin-1, putative n=3 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H9I8_ACACA) HSP 1 Score: 85.5 bits (210), Expect = 1.330e-17 Identity = 43/82 (52.44%), Postives = 55/82 (67.07%), Query Frame = 1 Query: 1 VCGARIENYLLEKQRVVRQAKGERNFHIFYQLCTSGI----AAHLELGGPEHFRYLSESGCVSVAGINDHKDFAEVEEVRQR 234 +CGA NYLLEK RVV Q KGERNFHIFYQL +G+ A L EH+ Y++ SGC+++ G++D KDF EV+E R Sbjct: 249 ICGASTVNYLLEKSRVVYQIKGERNFHIFYQL-VAGLDQETLAKWNLKSAEHYNYINTSGCITIDGVDDAKDFEEVKEAMVR 329
BLAST of mRNA_L-elsbetiae_contig9270.18280.1 vs. uniprot
Match: A0A152A126_9MYCE (Class VII unconventional myosin n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A126_9MYCE) HSP 1 Score: 82.8 bits (203), Expect = 1.180e-16 Identity = 41/76 (53.95%), Postives = 53/76 (69.74%), Query Frame = 1 Query: 1 VCGARIENYLLEKQRVVRQAKGERNFHIFYQLCTSGIAAH----LELGGPEHFRYLSESGCVSVAGINDHKDFAEV 216 + GARI NYLLEK R+V QAK ERN+HIFYQL +G++ L LG PE + YL++SGC+ + IND +DF V Sbjct: 173 ISGARIINYLLEKSRIVNQAKSERNYHIFYQLL-AGLSDEQKQKLSLGEPEEYHYLNQSGCIRIENINDVEDFEHV 247
BLAST of mRNA_L-elsbetiae_contig9270.18280.1 vs. uniprot
Match: UPI000644AF01 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644AF01) HSP 1 Score: 82.4 bits (202), Expect = 1.560e-16 Identity = 41/82 (50.00%), Postives = 55/82 (67.07%), Query Frame = 1 Query: 7 GARIENYLLEKQRVVRQAKGERNFHIFYQLCTSGIAA---HLELGGPEHFRYLSESGCVSVAGINDHKDFAEVEEVRQRNGV 243 G R+ NYLLEK RVV Q KGERNFHIFYQL + A L L P+ ++YL+ SGC SV G++D+++F +V + + GV Sbjct: 164 GGRVTNYLLEKSRVVYQTKGERNFHIFYQLLSGASAQMKNELRLESPDKYQYLASSGCYSVDGVDDNQEFQDVLKAMKVIGV 245
BLAST of mRNA_L-elsbetiae_contig9270.18280.1 vs. uniprot
Match: M4BFN1_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BFN1_HYAAE) HSP 1 Score: 82.4 bits (202), Expect = 1.590e-16 Identity = 40/84 (47.62%), Postives = 51/84 (60.71%), Query Frame = 1 Query: 7 GARIENYLLEKQRVVRQAKGERNFHIFYQLCTSGIAA-----HLELGGPEHFRYLSESGCVSVAGINDHKDFAEVEEVRQRNGV 243 G ++ NYLLEK RVV+ KGERNFHIFYQ+ A HL+ GGPE ++YL SGC V +ND ++F E Q G+ Sbjct: 189 GGKVTNYLLEKSRVVKPGKGERNFHIFYQMVAGLSPAAKQKLHLDQGGPESYQYLEASGCYDVDDVNDAQEFEETMAAMQHVGI 272 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9270.18280.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9270.18280.1 >prot_L-elsbetiae_contig9270.18280.1 ID=prot_L-elsbetiae_contig9270.18280.1|Name=mRNA_L-elsbetiae_contig9270.18280.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=82bp VCGARIENYLLEKQRVVRQAKGERNFHIFYQLCTSGIAAHLELGGPEHFRback to top mRNA from alignment at L-elsbetiae_contig9270:6568..7735+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9270.18280.1 ID=mRNA_L-elsbetiae_contig9270.18280.1|Name=mRNA_L-elsbetiae_contig9270.18280.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1168bp|location=Sequence derived from alignment at L-elsbetiae_contig9270:6568..7735+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9270:6568..7735+ >mRNA_L-elsbetiae_contig9270.18280.1 ID=mRNA_L-elsbetiae_contig9270.18280.1|Name=mRNA_L-elsbetiae_contig9270.18280.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=492bp|location=Sequence derived from alignment at L-elsbetiae_contig9270:6568..7735+ (Laminarionema elsbetiae ELsaHSoW15)back to top |