mRNA_L-elsbetiae_contig9257.18269.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9257.18269.1 vs. uniprot
Match: A0A6H5KJD5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJD5_9PHAE) HSP 1 Score: 140 bits (352), Expect = 8.580e-41 Identity = 62/83 (74.70%), Postives = 68/83 (81.93%), Query Frame = 1 Query: 10 QVIVALKVLASGCCFQDAASCTLMSRTTAEVSFHRFCEKFTEGLWDTWVQLPVGDDLDKVAEEYRKCGYPGAVGSLDCTHLAW 258 +V+ LKVLASGCCFQD AS +LMSRTTAE SFH FCE F+EGLWDTWV+LP GD+L KV E YRKCGYPGA GS DCTH W Sbjct: 58 KVLGTLKVLASGCCFQDVASFSLMSRTTAETSFHHFCENFSEGLWDTWVKLPRGDELKKVEEIYRKCGYPGATGSTDCTHFRW 140
BLAST of mRNA_L-elsbetiae_contig9257.18269.1 vs. uniprot
Match: A0A6H5L2S9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2S9_9PHAE) HSP 1 Score: 129 bits (324), Expect = 5.140e-36 Identity = 59/79 (74.68%), Postives = 63/79 (79.75%), Query Frame = 1 Query: 22 ALKVLASGCCFQDAASCTLMSRTTAEVSFHRFCEKFTEGLWDTWVQLPVGDDLDKVAEEYRKCGYPGAVGSLDCTHLAW 258 AL+VLASGCCFQD AS +L SRTTAE SFH FCEKF+EGLWDTWV+L GD L KV E YRK GYPGA GS DCTH W Sbjct: 21 ALEVLASGCCFQDVASFSLTSRTTAETSFHHFCEKFSEGLWDTWVKLLRGDSLKKVEEIYRKYGYPGATGSTDCTHFRW 99
BLAST of mRNA_L-elsbetiae_contig9257.18269.1 vs. uniprot
Match: A0A6H5KHV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHV5_9PHAE) HSP 1 Score: 120 bits (301), Expect = 9.300e-34 Identity = 55/72 (76.39%), Postives = 60/72 (83.33%), Query Frame = 1 Query: 10 QVIVALKVLASGCCFQDAASCTLMSRTTAEVSFHRFCEKFTEGLWDTWVQLPVGDDLDKVAEEYRKCGYPGA 225 +V+ LKVLASGCCFQD AS +LMSRTTAE SFH FCEKF+EGLWDTWV LP GD+ KV E YRKCGYPGA Sbjct: 26 KVMGTLKVLASGCCFQDVASFSLMSRTTAETSFHHFCEKFSEGLWDTWVNLPGGDEFKKVEEIYRKCGYPGA 97
BLAST of mRNA_L-elsbetiae_contig9257.18269.1 vs. uniprot
Match: A0A6H5KGV3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGV3_9PHAE) HSP 1 Score: 120 bits (302), Expect = 1.540e-32 Identity = 55/72 (76.39%), Postives = 61/72 (84.72%), Query Frame = 1 Query: 10 QVIVALKVLASGCCFQDAASCTLMSRTTAEVSFHRFCEKFTEGLWDTWVQLPVGDDLDKVAEEYRKCGYPGA 225 +V+ LKVLASGCCFQD AS +LMSRTTAE SFH FCEKF+EGLWDTWV+LP GD+ KV E YRKCGYPGA Sbjct: 137 KVMGTLKVLASGCCFQDVASFSLMSRTTAETSFHHFCEKFSEGLWDTWVKLPGGDEFKKVEEIYRKCGYPGA 208
BLAST of mRNA_L-elsbetiae_contig9257.18269.1 vs. uniprot
Match: A0A6H5KT09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT09_9PHAE) HSP 1 Score: 112 bits (281), Expect = 1.970e-30 Identity = 47/60 (78.33%), Postives = 50/60 (83.33%), Query Frame = 1 Query: 79 MSRTTAEVSFHRFCEKFTEGLWDTWVQLPVGDDLDKVAEEYRKCGYPGAVGSLDCTHLAW 258 MSRTTAE SFH FCEKF+EGLWDTWV+LP GD+L KV E YRKCGYPGA GS DCTH W Sbjct: 1 MSRTTAETSFHHFCEKFSEGLWDTWVKLPRGDELKKVEEIYRKCGYPGATGSTDCTHFRW 60
BLAST of mRNA_L-elsbetiae_contig9257.18269.1 vs. uniprot
Match: A0A6H5JY35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY35_9PHAE) HSP 1 Score: 114 bits (284), Expect = 1.860e-29 Identity = 50/83 (60.24%), Postives = 60/83 (72.29%), Query Frame = 1 Query: 10 QVIVALKVLASGCCFQDAASCTLMSRTTAEVSFHRFCEKFTEGLWDTWVQLPVGDDLDKVAEEYRKCGYPGAVGSLDCTHLAW 258 QV+ L+ L G CF D A+ +LMSRTTAE SFHRFC F GLW TW++LP G+DL +V YR GYPGAVGS+DCTH+ W Sbjct: 5 QVLGVLQALGRGNCFADVANFSLMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPW 87
BLAST of mRNA_L-elsbetiae_contig9257.18269.1 vs. uniprot
Match: A0A6H5L0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H2_9PHAE) HSP 1 Score: 111 bits (277), Expect = 9.500e-27 Identity = 49/83 (59.04%), Postives = 60/83 (72.29%), Query Frame = 1 Query: 10 QVIVALKVLASGCCFQDAASCTLMSRTTAEVSFHRFCEKFTEGLWDTWVQLPVGDDLDKVAEEYRKCGYPGAVGSLDCTHLAW 258 +V+ L+VL G CF D A+ +LMSRTTAE SFHRFC F GLW TW++LP G+ L +V YR GYPGAVGS+DCTH+ W Sbjct: 210 KVLGVLQVLGRGNCFADVANFSLMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEGLRRVESTYRSLGYPGAVGSIDCTHVPW 292
BLAST of mRNA_L-elsbetiae_contig9257.18269.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE) HSP 1 Score: 104 bits (259), Expect = 1.540e-24 Identity = 48/83 (57.83%), Postives = 58/83 (69.88%), Query Frame = 1 Query: 10 QVIVALKVLASGCCFQDAASCTLMSRTTAEVSFHRFCEKFTEGLWDTWVQLPVGDDLDKVAEEYRKCGYPGAVGSLDCTHLAW 258 +V+ L+VL G CF D A +LMSR TAE SFHRFC+ F+ GLW WV LP G+ L KVA EY G PGAV S+DCTH++W Sbjct: 112 KVLGVLQVLGRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMGCPGAVASVDCTHISW 194
BLAST of mRNA_L-elsbetiae_contig9257.18269.1 vs. uniprot
Match: A0A6H5KVL5_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVL5_9PHAE) HSP 1 Score: 101 bits (251), Expect = 4.030e-24 Identity = 48/75 (64.00%), Postives = 54/75 (72.00%), Query Frame = 1 Query: 25 LKVLASGCCFQDAASCTLMSRTTAEVSFHRFCEKFTEGLWDTWVQLPVGDDLDKVAEEYRKCGYPGAVGSLDCTH 249 LKVLASGCCFQD AS +LMSRTTAE SFH FCEKF+EGLWDTWV+LP GD+ K ++ GY V C H Sbjct: 4 LKVLASGCCFQDVASFSLMSRTTAETSFHHFCEKFSEGLWDTWVKLPGGDEFKKNTHTGKE-GYTSLVVECTCDH 77
BLAST of mRNA_L-elsbetiae_contig9257.18269.1 vs. uniprot
Match: A0A6H5K1K5_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1K5_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 6.680e-24 Identity = 40/60 (66.67%), Postives = 46/60 (76.67%), Query Frame = 1 Query: 79 MSRTTAEVSFHRFCEKFTEGLWDTWVQLPVGDDLDKVAEEYRKCGYPGAVGSLDCTHLAW 258 MS TAE SFH FCEKF+ LWDTWV+LPVGD+L +V +RK GYPGA+GS DCTH W Sbjct: 1 MSVATAEKSFHHFCEKFSAALWDTWVKLPVGDELKEVERVFRKSGYPGAIGSTDCTHFRW 60 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9257.18269.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9257.18269.1 >prot_L-elsbetiae_contig9257.18269.1 ID=prot_L-elsbetiae_contig9257.18269.1|Name=mRNA_L-elsbetiae_contig9257.18269.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=86bp ALPQVIVALKVLASGCCFQDAASCTLMSRTTAEVSFHRFCEKFTEGLWDTback to top mRNA from alignment at L-elsbetiae_contig9257:7683..7940+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9257.18269.1 ID=mRNA_L-elsbetiae_contig9257.18269.1|Name=mRNA_L-elsbetiae_contig9257.18269.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=258bp|location=Sequence derived from alignment at L-elsbetiae_contig9257:7683..7940+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9257:7683..7940+ >mRNA_L-elsbetiae_contig9257.18269.1 ID=mRNA_L-elsbetiae_contig9257.18269.1|Name=mRNA_L-elsbetiae_contig9257.18269.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=516bp|location=Sequence derived from alignment at L-elsbetiae_contig9257:7683..7940+ (Laminarionema elsbetiae ELsaHSoW15)back to top |