mRNA_L-elsbetiae_contig9235.18253.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9235.18253.1
Unique NamemRNA_L-elsbetiae_contig9235.18253.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig9235.18253.1 vs. uniprot
Match: D7FXA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA8_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 4.230e-28
Identity = 140/427 (32.79%), Postives = 178/427 (41.69%), Query Frame = 3
Query:    3 IDRLLRAGATPANGSAGWRGCRRRTLLDAAALGGNDDVVSALLQAGCRPDVNNVSSSSRRSALYQSTVGKHEAAARRLLIYCRGRRQLRGTHQWKHSPL-----CRCCDCATR*--SGARPTHCWSQPEHSHNAPAYSTARRC*AG--------PREDCVGHVG----------HSEYRQGCSRQPWVFTAHASLL**SPG---HGE---------GPLTRRR*SQHKGPR*QLFSAGHGG*WRDSIRRCSSP*LWG*RKYCWRFVEHSTRRCFLRSGRLCSSTP*CWS*SRT*RYFRRNSSPFWR*ARQRRSPRPLEVGSRPQPEDL*RIYGIDLTAGGDNGNMDDIVGLLLRWGASEQAMNDEGKTSAGLLR--QLRDERGWKMDELEW-----ALDLLASAPADRAWRRRCLLVMLRARVDKER 1151
            +DRLL+AG    +G AGWRGCR R+LLDAAALGGN  V+SALLQAGC PDVN V+SS+ RSALYQS +GKHEAAAR+L++   G          K  PL       C D       +GA P +   +    H  P ++ A++  A         P  D  GHV            ++ R   S    VF A    +        HG           PL         G    L  AG      D   +CS         +      +      LR G     T                                 + GS            + L +  +    DD V +LLR GASEQA++  GK    L +  Q R +    M + EW     A++LLA APADR WRRRC L+MLR R +KER
Sbjct:   48 VDRLLKAGV---DGKAGWRGCRGRSLLDAAALGGNAGVMSALLQAGCGPDVNVVASSTGRSALYQSVLGKHEAAARKLILA--GADVNFVDRADKAGPLFAAVKAGCDDLVGNLLMAGANP-NVIVRHSFGHGTPLHAAAKQGLANTASVLLSSPSTDKNGHVATVKVLLAAGADTDIRDLDSHSALVFAAQYERIDVMKALLEHGVDVNVGEDHWNPLHWAAQFNSTGCITVLLDAG-----ADIDVKCSFLDGRTSLHFAAETGNNEALLALLRRGANVHQT--------------------------------TDDGST----------ALHLVSEMEGHAPDDTVDILLRRGASEQAVDRNGKAPVDLFKRVQRRFQSARPMGDSEWPELERAIELLARAPADRTWRRRCWLIMLRERTNKER 421          
BLAST of mRNA_L-elsbetiae_contig9235.18253.1 vs. uniprot
Match: A0A6H5KE43_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE43_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 1.040e-22
Identity = 127/388 (32.73%), Postives = 162/388 (41.75%), Query Frame = 3
Query:    3 IDRLL-RAGATPANGSAGWRGCRRRTLLDAAALGGNDDVVSALLQAGCRPDVNNVSSSSRRSALYQSTVGKHEAAARRLLIYCRGRRQLRGTHQWKHSPLCRCCDCATR*SGARPTHCWSQPEHSHNAPAYSTARRC*AGPREDCVGHVGHSEYRQGCSRQPWVFTAHASLL**SPGHGEGPLTRRR*SQHKGPR*QLFSAGHGG*WRDSIRRCSSP*---LWG*RKYCWRFVEHSTRRCFLRSGRLCSSTP*CWS*SRT*RYFRRNSSPFWR*ARQRRSPRPLEVGSRPQPEDL*RIYGIDLT--AGGDNGNMDDIVGLLLRWGASEQAMNDEGKTSAGLLRQLRDERGWKMDELEWALDLLASAPADRAWRRRCLLVMLRARVDKE 1148
            +DRLL +AGA   N   GWRGCR RTLLDAAALGGN  V+ ALLQAGC PDVN V++S+ RSALYQS VGK EAAARRL+++  G          K  PL           G R                 S+AR   AGPRE   G V   +  Q    Q W   +   ++         P  R   S ++     + ++      R+S                 Y    V H T    L    +C++           R  R++++PF   AR   +   L +  R    D     G      A     NM D V +L+RWGASEQ ++ +G T A +                            RAWRRRC L MLR R  KE
Sbjct:   89 VDRLLLKAGA---NYLEGWRGCRGRTLLDAAALGGNAHVMPALLQAGCGPDVNAVAASTGRSALYQSIVGKQEAAARRLVVF--GADVNFEDRANKAGPLIAAIQMPINWLGRRN----------------SSARCRWAGPREHGFGAVELFQDGQERPEQRWAIPSDDGVI---------PWPRVPMSTYEALPTPIAASLALALERESAATAMVKHGLVANADDGYGSFSVVHWTA---LMDHAVCAAALVDAGADIDPRSGRKDAAPFLLAARAGSNGALLALLRRGASVDQTTNNGSTALHIAANSGENMGDTVDILMRWGASEQTVDQQGSTPADVFT--------------------------RAWRRRCWLAMLRGRTKKE 417          
BLAST of mRNA_L-elsbetiae_contig9235.18253.1 vs. uniprot
Match: A0A6H5JE18_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE18_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 1.280e-21
Identity = 126/400 (31.50%), Postives = 151/400 (37.75%), Query Frame = 3
Query:    3 IDRLLRAGATPANGSAGWRGCRRRTLLDAAALGGNDDVVSALLQAGCRPDVNNVSSSSRRSALYQSTVGKHEAAARRLLIYCRGRRQLRGTHQWKHSPLCRCCDCATR*SGARPTHCWSQPEHSHNAPAYSTARRC*AGPREDCVGHVGHSEYRQGCSRQPWVFTAHASLL**SPGHGEGPLTRRR*SQHKGPR*QLFSAGHGG*WRDSIRRCSSP*LWG*RKYCWRFVEHSTRRCFLRSGRLCSSTP*CWS*SRT*RYFRRNSSPFWR*ARQRRSPRPLEVGSRPQPEDL*RIYGIDLTAGGDNGNM----------------DDIVGLLLRWGASEQAMNDEGKTSAGLLRQLRDERGWKMDELEWALDLLASAPADRAWRRRCLLVMLRARVDKERL 1154
            + +LL AGA    G AGW GC  RTLLDAAALGGN DVV+ALL+AGC PDVN VS SSRRSA + S V  HEAAAR+L+        L G    +  P  +C       +G    HC S         A+  AR        D +G      YR    RQ  V      +    P   +  L  R  +    P       GH                             ST +  L +G   S  P            R  +S                                     G   N                 D IV LLLRW  SE  +++ G T A LL            E+E A  LLA+ PADRAWRRR  LVMLRAR + ER+
Sbjct:   35 VKKLLNAGA---GGGAGWSGCHGRTLLDAAALGGNPDVVTALLRAGCLPDVNAVSVSSRRSAWHLSAVCGHEAAARKLI--------LAGADADRVDPAEKCGPLHVAAAGG---HC-SLVGDLLIGGAHPNAR--------DLLGRT--PLYRAAYMRQDMVVAVLTDM----PSTDKDILDYRELT----PLMVALQRGH----------------------------LSTNKTLLNAGADVSIRP------------RHENSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGCMSNQAGAVSVAPGMFMAPGFDAIVDLLLRWEVSELTLDNAGSTPAALLSVAEGSSSRTAREVERAHALLANTPADRAWRRRSWLVMLRARTEGERV 361          
BLAST of mRNA_L-elsbetiae_contig9235.18253.1 vs. uniprot
Match: D8LBP9_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBP9_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 1.340e-21
Identity = 133/426 (31.22%), Postives = 162/426 (38.03%), Query Frame = 3
Query:    3 IDRLLRAGATPANGSAGWRGCRRRTLLDAAALGGNDDVVSALLQAGCRPDVNNVSSSSRRSALYQSTVGKHEAAARRLLIYCRGRRQLRGTHQWKHSPLCRCCDCATR*SGARPTHCWSQPEHSHNAPAYSTARRC*AGPR-EDCVGHVG-HSEYRQGCSRQPWVFTAHAS----LL**SPGHGEGPLTRRR*SQHKGPR*QLFSAGHGG*WRDSIRRCSSP*LW------------------G*RKYCWRFVEHST-------------------RRCFLRSGRLCSSTP*CWS*SRT*RYFRRNSSPFWR*ARQRRSPRPLEVGSRPQPEDL*RIYGIDLTAGGDNGNMDDIVGLLLRWGASEQAMNDEGKTSAGLLRQLRDERGWKMDELEWALDLLASAPADRAWRRRCLLVMLRARVDKER 1151
            +++LL AGA   +G AGW GCR RTLLDAAALGGN DVV+ LL+AGC PDVN VS SSRRSAL+ S V  HEAAAR+L+        L G               A R   A                           P   D +G    H     G      V T   S    +L  S   G  PLT      H      L +AG     R   R                             K+ +  +                       R+C+  S  LC +     S        RR                     S P  + +  +  + +  G      D IV LLLRWG SE  ++  G T A LL         K  E+E A  LLA+APADRAWRRR  LVMLRAR ++ER
Sbjct:   48 VEKLLNAGA---DGGAGWSGCRGRTLLDAAALGGNPDVVTTLLRAGCLPDVNVVSVSSRRSALHLSAVCGHEAAARKLI--------LAGAD-------------ANRVDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXPNARDLLGRTPLHRAAYMGQDMVVAVLTDMPSTDKDILDKS---GLSPLTVASQRGHLSTVKTLLNAGADVSMRTGHRNSXXXXXXXXXXXXXXXXXXXXXXXVNASKHGYTALHAGCAMNQAGAMDVLLDAGADMDRKCYGASTPLCVAIEFGASVQAVHTLLRRGCQV-----------------SGPMDKTMLHLACMTMAPG-----FDAIVDLLLRWGVSELTLDKGGNTPAALLSVAEGSSSRKAREVERAHVLLANAPADRAWRRRSWLVMLRARTERER 424          
BLAST of mRNA_L-elsbetiae_contig9235.18253.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 1.630e-21
Identity = 135/431 (31.32%), Postives = 181/431 (42.00%), Query Frame = 3
Query:    3 IDRLLRAGATPANGSAGWRGCRRRTLLDAAALGGNDDVVSALLQAGCRPDVNNVSSSSRRSALYQSTVGKHEAAARRLLIYCRGRRQ---------LRGTHQWKHSPLCR------CCDCATR*SGARPTHCWSQPEHSHNAPAYSTARRC*AGPREDCVGHVGHSEYRQG-----CSRQPWVFTAHASLL**SPGHGEGPLTRRR*SQHKGPR*QLFSAGHGG*WRDSIRRCSSP*LWG*RKYCWRFVEHSTRR----CFLRSGR--LCSSTP*CWS*SRT*RYFRRNSSPFWR*ARQRRSPRPLEVGSRPQPEDL*RIYGIDLTAGGDNGNMDDIVGLLLRWGASEQAMNDEGKTSAGLLR------QLRDERG------------WKMD----ELEWALDLLASAPADRAWRRRCLLVMLRARVDKER 1151
            ++RLL AGA   NG AGWRGCR RT+LDAAALGGN DVV+ LL +GC  DVN VS SSRRSAL+ ++V  HEAAA++L+I      +         L    + +H  L         C  +   SG  P H  +    S N    ST     A    D +   G S          CS    +  A A +     G     +T    +  KG    + +    G    ++R   +        Y    + H+         L +G      + P     +        NS               L+ G      +   +  + LT G  +  MD +V LLLRWGASE A+N  G T + +L+        RD  G             + D    E++ A  LLA APADR WRRRC LVMLRAR ++ R
Sbjct:   50 VERLLNAGA---NGGAGWRGCRGRTMLDAAALGGNPDVVATLLASGCASDVNVVSLSSRRSALHVASVCGHEAAAKKLIIAGADVNRVDPGDACVSLHVAVEGRHGDLVDLLLIGGACPNSRTMSGRTPLHLAAA---SGNNRVVSTLLGN-AMTDVDALDSRGVSPLMVASEGGHCSTVEALLRAGADMNLRHAGGAHLGMTAMDVAVSKGHVGVIEAIVENG---GNVRATDT--------YGLTALHHARGAQAVDVLLDAGADVNAKACPALHGFTPLSVCVMDNSCEA--------VVALLKRGGNVNDTNCGGLSALHLTCGSLSRGMDRMVDLLLRWGASETAVNKNGLTPSDILKVTTAEYHARDAGGDGSATRCVGGSATRHDSLTKEIQRARVLLARAPADRTWRRRCWLVMLRARAERGR 454          
BLAST of mRNA_L-elsbetiae_contig9235.18253.1 vs. uniprot
Match: A0A6H5K513_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K513_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 3.050e-18
Identity = 120/407 (29.48%), Postives = 155/407 (38.08%), Query Frame = 3
Query:    3 IDRLLRAGATPANGSAGWRGCRRRTLLDAAALGGNDDVVSALLQAGCRPDVNNVSSSSRRSALYQSTVGKHEAAARRLLIYCRGRRQLRGTHQWKHSPLCRC----CDCATR*SGARPTHCWSQPEHSHNAPAYSTARRC*AGPREDCVGHVGHSEYRQGCSRQPWVFTAHASLL**SPGHGEGPLTRRR*SQHKGPR*QLFSAGHGG*WRDSIRRCSSP*LWG*RKYCWRFVEHSTRRCFLRSGRLCSSTP*CWS*SRT*R-----------------YFRRNSSPFWR*ARQRRSPRPLEVGSRPQPEDL*RIYG---IDLTAGGDNGNMDDIVGLLLRWGASEQAMNDEGKTSAGLLRQLRDERGWKMDELEWALDLLASAPADRAWRRRCLLVMLRARVDKER 1151
            +++LL+AGA   +G AGWRGC  RTLLDAA  GGN  V+SALLQAGC PD N ++ S+ RS LYQS +   +A AR L++   G          K  PL       CD                            A     G  +  +  V  S             T   +L+      G  PL       H      L +AG     R+    CS+                         G +   +P  W+                        F  N                L + SR    D     G   + L        +DD V  LLRWGASEQA+++  +T    L ++  E  W+  EL+ AL+LLA APADRAWRRR  LVML  R  KER
Sbjct:   50 VNKLLKAGA---DGEAGWRGCGDRTLLDAALSGGNAGVMSALLQAGCGPDANVLAPSTGRSVLYQSILSNQKAVARELILA--GADVNIKDRAEKAGPLLAAVRAGCDDLXXXXXXXXXXXXXXXXXXXXXXXXXXA-----GMNKAKIVSVLLSS----------PMTDKDALV-----DGYTPLMVAAEQGHVATVKVLLAAGADVDVREVDYSCSAXXXXXXXXXXXXXXXXXXXXXXANEGVIDDQSPLHWAAGHNRPDCVAVLLDAGANINGRCNFLDNHXXXXXXXXXXXXEALLALLSRGARVDEKTDDGSTALHLAGHARGYKVDDTVDTLLRWGASEQAVDENDETPVDRLTEVAREVVWEWPELDRALELLARAPADRAWRRRGWLVMLHERTKKER 431          
BLAST of mRNA_L-elsbetiae_contig9235.18253.1 vs. uniprot
Match: A0A6H5JY41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY41_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 5.690e-18
Identity = 122/430 (28.37%), Postives = 161/430 (37.44%), Query Frame = 3
Query:    3 IDRLLRAGATPANGSAGWRGCRRRTLLDAAALGGNDDVVSALLQAGCRPDVNNVSSSSRRSALYQSTVGKHEAAARRLLIYCRGRRQLRGTHQWKHSPLCRCCDCATR*SGARPTHCWSQPEHSHNAPAYSTARRC*AGPREDCVGHVG-HSEYRQGCSRQPWVFTAHASL-L**SPGHGEGPLTRRR*SQHKGPR*QLFSAGHGG*WRDSIRRCSSP*LWG*RKYCWRFVEHSTRRCFLRSGRLCSSTP*CWS*SRT*RYFRRNSSPFWR*ARQRRSPRPLEVGSRPQPEDL*RIYG-----------------IDLTAGGDNGN--------------------MDDIVGLLLRWGASEQAMNDEGKTSAGLLRQLRD--------ERGWKMDELEWALDLLASAPADRAWRRRCLLVMLRARVDKER 1151
            ++RLL AGA   +G AGWRGCR RT+LDAAALGGN DVV+ LL++ C PDVN VS SS+RSAL+ +    HEAAAR L+I         G    +  P+ R            P H  ++  H      Y T   C        VG    H     G +R        A+  +      G  PL     + H+     L  AG      D+ RR +             F   +        G +        +            +     A  +     ++V                               + L   G N N                    +D  VGLLLRW A   A++  G+T +  L              R    +E++ AL LLA APADR WRRRC L MLRAR  +ER
Sbjct:   50 VERLLEAGA---DGGAGWRGCRSRTMLDAAALGGNADVVTKLLRSECVPDVNVVSVSSKRSALHLAVTWSHEAAARTLMIA--------GADNHRVDPVNR----------YTPFHVAAEGGHDDLVDNYLTGGAC--PNSRSRVGRTPLHLADGLGNNRDVSALLGDANTHMDALDNDGFSPLMLASRNGHRSTVEVLLRAG-----ADTTRRATDS---------GDFSHMAALDVAAAQGHVRVVKAILGNGGDASAVDDHGCTALHYAALHKHGGEVVDVXXXXXXXXXXXXXXXXXXXXXXXXXXXDEAMVTLVKRGGNVNENTSNGVSVLHWACAIPRPGVDRAVGLLLRWEAFAAALDSRGETPSNHLELAAALFAGTSAAPRNSVREEIQRALVLLARAPADRTWRRRCWLAMLRARAGRER 442          
BLAST of mRNA_L-elsbetiae_contig9235.18253.1 vs. uniprot
Match: A0A6H5KNQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ1_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 2.090e-17
Identity = 50/80 (62.50%), Postives = 63/80 (78.75%), Query Frame = 3
Query:    3 IDRLLRAGATPANGSAGWRGCRRRTLLDAAALGGNDDVVSALLQAGCRPDVNNVSSSSRRSALYQSTVGKHEAAARRLLI 242
            ++RLL+AGA   +  AGWRGCR RTLLDAAALGGN DV+SAL++ G   DVN V+ SSRRSAL+ +T   HEAAA+RL++
Sbjct:   50 VERLLQAGA---DAGAGWRGCRGRTLLDAAALGGNADVMSALIRGGAGADVNKVTVSSRRSALHTATCCGHEAAAKRLVL 126          
BLAST of mRNA_L-elsbetiae_contig9235.18253.1 vs. uniprot
Match: D8LRZ8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRZ8_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 3.060e-17
Identity = 51/79 (64.56%), Postives = 65/79 (82.28%), Query Frame = 3
Query:    3 IDRLLRAGATPANGSAGWRGCRRRTLLDAAALGGNDDVVSALLQAGCRPDVNNVSSSSRRSALYQSTVGKHEAAARRLL 239
            ++ LL AGA   +GSAGW+GCR RTL+DAAALGG++ VVSALL+AG +PDVN VS SS+RS+LY +TV  H+ AARRL+
Sbjct:   50 VNSLLEAGA---DGSAGWKGCRGRTLIDAAALGGSEPVVSALLRAGAQPDVNVVSVSSKRSSLYTATVCGHKDAARRLI 125          
BLAST of mRNA_L-elsbetiae_contig9235.18253.1 vs. uniprot
Match: D8LRS0_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRS0_ECTSI)

HSP 1 Score: 94.4 bits (233), Expect = 7.240e-17
Identity = 52/78 (66.67%), Postives = 62/78 (79.49%), Query Frame = 3
Query:    3 IDRLLRAGATPANGSAGWRGCRRRTLLDAAALGGNDDVVSALLQAGCRPDVNNVSSSSRRSALYQSTVGKHEAAARRL 236
            ++ LL AGA   +GSAGWRGC  RTL+DAAALGG++ VVSALL+AG +PDVN VS SS+RSALY +TV  HE AAR L
Sbjct:   50 VNSLLEAGA---DGSAGWRGCLDRTLIDAAALGGSEPVVSALLRAGAQPDVNTVSISSKRSALYTATVCGHEHAARGL 124          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9235.18253.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXA8_ECTSI4.230e-2832.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KE43_9PHAE1.040e-2232.73Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JE18_9PHAE1.280e-2131.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBP9_ECTSI1.340e-2131.22Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
A0A6H5K1F4_9PHAE1.630e-2131.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K513_9PHAE3.050e-1829.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JY41_9PHAE5.690e-1828.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNQ1_9PHAE2.090e-1762.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRZ8_ECTSI3.060e-1764.56Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D8LRS0_ECTSI7.240e-1766.67Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9235contigL-elsbetiae_contig9235:3069..6808 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score128.6
Seed ortholog evalue3.9e-27
Seed eggNOG ortholog2880.D7FXA8
KEGG koko:K21440
Hectar predicted targeting categoryother localisation
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Ec32 ortholog descriptionAnkyrin repeat-containing domain
Ec32 orthologEc-02_000670.1
Exons2
Model size1782
Cds size738
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9235.18253.1prot_L-elsbetiae_contig9235.18253.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9235 5858..6595 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816995.8919606-UTR-L-elsbetiae_contig9235:3068..34311622816995.8919606-UTR-L-elsbetiae_contig9235:3068..3431Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9235 3069..3431 -
1691683969.693819-UTR-L-elsbetiae_contig9235:3068..34311691683969.693819-UTR-L-elsbetiae_contig9235:3068..3431Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9235 3069..3431 -
1622816995.9029448-UTR-L-elsbetiae_contig9235:5389..58571622816995.9029448-UTR-L-elsbetiae_contig9235:5389..5857Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9235 5390..5857 -
1691683969.7127068-UTR-L-elsbetiae_contig9235:5389..58571691683969.7127068-UTR-L-elsbetiae_contig9235:5389..5857Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9235 5390..5857 -
1622816995.9303582-UTR-L-elsbetiae_contig9235:6595..68081622816995.9303582-UTR-L-elsbetiae_contig9235:6595..6808Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9235 6596..6808 -
1691683969.7331393-UTR-L-elsbetiae_contig9235:6595..68081691683969.7331393-UTR-L-elsbetiae_contig9235:6595..6808Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9235 6596..6808 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816995.9133153-CDS-L-elsbetiae_contig9235:5857..65951622816995.9133153-CDS-L-elsbetiae_contig9235:5857..6595Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9235 5858..6595 -
1691683969.7237182-CDS-L-elsbetiae_contig9235:5857..65951691683969.7237182-CDS-L-elsbetiae_contig9235:5857..6595Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9235 5858..6595 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9235.18253.1

>prot_L-elsbetiae_contig9235.18253.1 ID=prot_L-elsbetiae_contig9235.18253.1|Name=mRNA_L-elsbetiae_contig9235.18253.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=246bp
MKPQRAGCLSIAGADDNYEEPTNGNTPLCAAAVIARQDSLVRDQLIAGAS
PNTRTTHQRTPLHGAAELGLEKIVSAMLGTPSTDKDVLDNRGYSPLMLAY
SSDHLDTVKALSHAGADLSIRDPDDNYSVLDMAANGGTVSDVAALLDFGA
DVNTAGGSWSTLHGAAFFDQADCVRVLLDAGADLERKDILGETALHFGAR
QGSDAALALLRWGADPNQRTSDGSTALTLQPVGITATWTTLLVCF*
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mRNA from alignment at L-elsbetiae_contig9235:3069..6808-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9235.18253.1 ID=mRNA_L-elsbetiae_contig9235.18253.1|Name=mRNA_L-elsbetiae_contig9235.18253.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3740bp|location=Sequence derived from alignment at L-elsbetiae_contig9235:3069..6808- (Laminarionema elsbetiae ELsaHSoW15)
CGATAGATAGGCTGCTCAGGGCCGGGGCCACGCCGGCCAACGGCAGCGCG GGATGGAGGGGCTGCCGGCGACGGACTCTGCTCGACGCCGCTGCTCTGGG TGGGAACGATGACGTGGTGTCTGCCCTACTCCAGGCGGGTTGCCGGCCGG ACGTGAACAACGTGTCGTCTTCCTCGAGGAGGTCGGCGCTGTATCAGTCG ACCGTGGGCAAACATGAAGCCGCAGCGCGCAGGCTGCTTATCTATTGCCG GGGCCGACGACAACTACGAGGAACCCACCAATGGAAACACTCCCCTCTGT GCCGCTGCTGTGATTGCGCGACAAGATAGTCTGGTGCGCGACCAACTCAT TGCTGGAGCCAGCCCGAACACTCGCACAACGCACCAGCGTACTCCACTGC ACGGCGCTGCTGAGCTGGGCCTCGAGAAGATTGTGTCGGCCATGTTGGGC ACTCCGAGTACAGACAAGGATGTTCTAGACAACCGTGGGTATTCACCGCT CATGCTAGCTTACTCTAGTGATCACCTGGACACGGTGAAGGCCCTCTCAC ACGCCGGCGCTGATCTCAGCATAAGGGACCCCGATGACAACTATTCAGTG CTGGACATGGCGGCTAATGGAGGGACAGTATCCGACGTTGCAGCTCTCCT TGACTTTGGGGCTGACGTAAATACTGCTGGAGGTTCGTGGAGCACTCTAC ACGGCGCTGCTTTCTTCGATCAGGCAGACTGTGTTCGAGTACTCCTTGAT GCTGGAGCTGATCTCGAACGTAAAGATATTTTAGGAGAAACAGCTCTCCA TTTTGGCGCTAGGCAAGGCAGCGACGCAGCCCTCGCCCTCTTGAGGTGGG GAGCCGACCCCAACCAGAGGACCTCTGACGGATCTACGGCATTGACCTTA CAGCCGGTGGGGATAACGGCAACATGGACGACATTGTTGGTCTGCTTTTG AGATGGGGTGCTTCCGAACAAGCCATGAATGACGAAGGAAAAACGTCGGC TGGCCTCTTGCGACAATTGCGTGATGAGCGTGGGTGGAAGATGGACGAGC TTGAGTGGGCATTGGACCTGCTGGCGAGCGCCCCAGCGGATAGGGCGTGG CGCCGCCGGTGCTTGCTCGTGATGCTTCGTGCACGGGTCGACAAGGAGAG GCTGAAAAGGCGTAGTGGCCAACGCAGAAGCAAAACGAGAAGCAGCAGTG ACCAAGATGTCCAAGATAATCGGGGGCGTGACGACAGCAACAGAGGACGA CAAGCGAAAGCCCGCAGCAGCGGAGAGGTCGTGCGAGGGGTCGAGGACGG GGAGCCGGCACGAAGGCGGATTTGAGGAGCTTGGCCGGCGCGCTGGTAGG TCTGGAATCTGACGGCATATTCCGCACGGTTGTGGCCTATCTGTGAAGGA GGAGGCTTTCGCAGACCAGGTGTGTCATCGTTGGCTACATACTGCTGTTC GTCGTTGCCTGTCAAGAATATTTACCATCAGGTGCACATGCCGTCCTGTT GCTTGAGTTTGAAATGTTGTAAATACCCCCCGAACTCTAGCCGGCCTTGC ATTTTGAATTGACCTCCCACCTTCCTGCCCGAAGGCTTCGAATTCGTCCA GTTGTTTCCGTCATTCCAACAAATATGTGCGCAATAAAATCGGGAGAGTC TTTGTAGAGGGGTGAAGATTCCACAGGTAAGTGTGCCCCCCCGGGGCTAA ATAGCTCCCAAATTCCTGACTGTTATGTTACGGGTCATTCCATCACTGGT GTTGTTGAGGCTTTGAAACTCAGACGCACCAGTCTCCAAAAATGTCGTAC AGCTCCCGCAGACTAGACTGTTGCGTTCTCACCATGACTGAAGCAGCGCG TGTTGGTCTGTTTTTAGTTTATTCCGGGCATGTCTCGGGGTCGGATCCAA GACTAGGATGGGTCCCGTCGGTTAGACCCTCTCTCATTGAAAAACGGAAT TCAGTTGTGTGGCGGTTGAGCTGCTACATACATGCCTACGCAGTTAGTGC TCGACCGACTGCTGGCTTTGGAACCGACCGCTGTATCTATTCTTCGTAGT ATATGCATCATCGTGTTGTGTGGACATAGAATGCTGCGCTGCTGATTTTC CAGCATTCTGCACAAGCCAGCCACCCGCCATGCTTGTCGTCCCCCACAAA GCGACACCCTTTTTCCCGGGGCCCCTGCCATCACAGTACAAGGGGCCTGA CGGAATGCAGGCTGGGACACCACAGCTCCCCCCCCCCACACACACACCGA AAATGTGGGCATCGATGGCGTCGTGATGACCCTATATATGGCGTCGTCAG GGCCAACCGACCCTCGGATTTATTGGAGGAGGGGGGGTAGTAACAAGCAT CGCGTGATGACCACCCTAAATCCTATATAATAAGACCCCCCCCCCCCTCT CGATTCTGGTCTTACCGATGTTTCTAGGGTGTGGTGTCCCAGCCGGCATT GAGGCCCCTTGCACACTAGTAGGTATATCCTAGTATGGTTTAGTTTCCCT TCAATCAACCCCGAGGCTCGATTGTTTTCGTCCGGCTTCCTCCATTTTCC CCGCCTCGAGTACTGCCTCTGGATCGCGGCCTTGAGAGAGAGACCCTTGT TGTCGTGTTTGAGTCTGCTGGGGCCGACGCCTTTTTTCTTCCGCCGTTTT TCTTCGGTCAGCCGATTGACGCGGTTGATGCCAGTTGAGCGCACAACCCG ACTTCTCCTGCGGTGCGACCTGCATGAATTTATTTGGCTGGAGAAGAAGT CGTTCAACCAGGGCTGGTAGCGCGTGGCTTTCCTTCGGTGTTGGGTACAA TGCATTTCTTCCCCAAGCATGAACTGACGCGATGACTGAGCCAGTGTTGG CGCGTGTCTCGCTTCCTGCTCTGTGTTCGAACTCGGCAGTATCATCGTGG TGAATCGCAATCTTCATCTTGGCTTACGCCGTTTGTTGTGTGTCGGAAGA ACCTGCAGCTGTATTTTACGGTACGGTAGTAGCTTTTCTTTGTCGTATTT GTTCGCCCTCCTTTGGGTGAGGTATCAAGCACTTCGCAACAACAGTAGTT GCGCGCAAAGGTCGCCCACATAAACTCTGGCGAGTTGCGAATAGCTTTCG GCCATCACGCCAATAAATCGCTCCATGCTCGTTTCTATGTTGCATGTACA TAGCCTTTGAACCGTGCGAAGGAGCCATTGTGGAATTACACGACAACGTA GTGTTCGTTCGGGTTTGAACAACGTGCGTTCACTCCATGCCCAGTTTCCG TGTCTGGTGCCACCGTCGCCCTCGTCGCTCCGTCAAGCCAATCCGATGCT CACCGTATCCCAACTCGCGCTGCACTTTCTCCCTGCACAACTGCTTGTAT GCTCTTGGTGTTGTCGCGATCACGCAGGCGTAATCTGTTGACCGGAGGTA GGCAACCGACGCCACAGGGATGGTTGTTCACATCAAATATCACGGTCTCC CCGGCATCTGGACTCTTGAAAGAGGCTTGACGCCCGGCATCTGGCTGCCT CTTTCGCTATTTGCTAATTGATCATGTCTCGGGGCCCCGGTGTTGCCCCG CATTGCGTGGGTATGTAGGGTCCCGACAGGCTTGCCGTGCTTACCATTTC CTTGCTGCATGCGGCGCTGCGCACTCGCTCGTACGCGGGATACTATTTAC ATTGTTTCAGACGGTGGCAGATCGACCGCAAGCTTTTACTCGTGAGCTGC CAGCTGCGCAGAGTAGTAGAAGTAGTAGTGGTAGTAGAAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig9235:3069..6808-

>mRNA_L-elsbetiae_contig9235.18253.1 ID=mRNA_L-elsbetiae_contig9235.18253.1|Name=mRNA_L-elsbetiae_contig9235.18253.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1476bp|location=Sequence derived from alignment at L-elsbetiae_contig9235:3069..6808- (Laminarionema elsbetiae ELsaHSoW15)
ATGAAGCCGCAGCGCGCAGGCTGCTTATCTATTGCCGGGGCCGACGACAA
CTACGAGGAACCCACCAATGGAAACACTCCCCTCTGTGCCGCTGCTGTGA
TTGCGCGACAAGATAGTCTGGTGCGCGACCAACTCATTGCTGGAGCCAGC
CCGAACACTCGCACAACGCACCAGCGTACTCCACTGCACGGCGCTGCTGA
GCTGGGCCTCGAGAAGATTGTGTCGGCCATGTTGGGCACTCCGAGTACAG
ACAAGGATGTTCTAGACAACCGTGGGTATTCACCGCTCATGCTAGCTTAC
TCTAGTGATCACCTGGACACGGTGAAGGCCCTCTCACACGCCGGCGCTGA
TCTCAGCATAAGGGACCCCGATGACAACTATTCAGTGCTGGACATGGCGG
CTAATGGAGGGACAGTATCCGACGTTGCAGCTCTCCTTGACTTTGGGGCT
GACGTAAATACTGCTGGAGGTTCGTGGAGCACTCTACACGGCGCTGCTTT
CTTCGATCAGGCAGACTGTGTTCGAGTACTCCTTGATGCTGGAGCTGATC
TCGAACGTAAAGATATTTTAGGAGAAACAGCTCTCCATTTTGGCGCTAGG
CAAGGCAGCGACGCAGCCCTCGCCCTCTTGAGGTGGGGAGCCGACCCCAA
CCAGAGGACCTCTGACGGATCTACGGCATTGACCTTACAGCCGGTGGGGA
TAACGGCAACATGGACGACATTGTTGGTCTGCTTTTGAATGAAGCCGCAG
CGCGCAGGCTGCTTATCTATTGCCGGGGCCGACGACAACTACGAGGAACC
CACCAATGGAAACACTCCCCTCTGTGCCGCTGCTGTGATTGCGCGACAAG
ATAGTCTGGTGCGCGACCAACTCATTGCTGGAGCCAGCCCGAACACTCGC
ACAACGCACCAGCGTACTCCACTGCACGGCGCTGCTGAGCTGGGCCTCGA
GAAGATTGTGTCGGCCATGTTGGGCACTCCGAGTACAGACAAGGATGTTC
TAGACAACCGTGGGTATTCACCGCTCATGCTAGCTTACTCTAGTGATCAC
CTGGACACGGTGAAGGCCCTCTCACACGCCGGCGCTGATCTCAGCATAAG
GGACCCCGATGACAACTATTCAGTGCTGGACATGGCGGCTAATGGAGGGA
CAGTATCCGACGTTGCAGCTCTCCTTGACTTTGGGGCTGACGTAAATACT
GCTGGAGGTTCGTGGAGCACTCTACACGGCGCTGCTTTCTTCGATCAGGC
AGACTGTGTTCGAGTACTCCTTGATGCTGGAGCTGATCTCGAACGTAAAG
ATATTTTAGGAGAAACAGCTCTCCATTTTGGCGCTAGGCAAGGCAGCGAC
GCAGCCCTCGCCCTCTTGAGGTGGGGAGCCGACCCCAACCAGAGGACCTC
TGACGGATCTACGGCATTGACCTTACAGCCGGTGGGGATAACGGCAACAT
GGACGACATTGTTGGTCTGCTTTTGA
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