mRNA_L-elsbetiae_contig920.18224.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig920.18224.1 vs. uniprot
Match: A0A6H5JKZ2_9PHAE (DLH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKZ2_9PHAE) HSP 1 Score: 394 bits (1011), Expect = 5.960e-132 Identity = 207/299 (69.23%), Postives = 231/299 (77.26%), Query Frame = 1 Query: 1 QVIRQAWAKDQTSLDSVGDTSSSSSSPSSWNIRRSVVDYNDGGTALQGLYARPEGEGLPDRLPGVILAHTAVGPQEDMILWKLDAIARLGYAAFALDMFGTGHALWDRAQSLAARRPITEDRSLMQGRVMAAVRTLGQMEEVDQEKLAAVGYCFGGMAVLDLARMARPDVEGDEDKAPLTVKAVASLHGILAPILPGAGCK-----VSDDXXXXXXXXXXXXXXXXPFVPPDQVQAMELEFLRRGANLEIVRYGGEALHAFTRPEKTHHTDKHAGLSYCKHADEDSWRRVVGLLREELS 882 +VIR AWA T+ D+ +SSSS +SW+IRRSVV+YNDG TALQGLY RPEGEGLPDRLPGVILAHTAVGPQEDMILWKLD IA LGYAAFALDMFGTG ALW+RA+SLAARRPITEDRSLMQ R AAVRTL QME +D+E+LAAVGYCFGGM VLDLARM RPD + P +KAVASLHGILAPI PG G + +DD PFVPP+QV+AME E RRGA LE+VRYGG A+HAFTRPEKT D+ AGLSYCK+A+EDSWRRVV LLREE + Sbjct: 71 KVIRAAWAVATTNPDTTNGRGASSSS-ASWSIRRSVVEYNDGDTALQGLYTRPEGEGLPDRLPGVILAHTAVGPQEDMILWKLDQIALLGYAAFALDMFGTGRALWNRAESLAARRPITEDRSLMQARATAAVRTLSQMEGIDEERLAAVGYCFGGMTVLDLARMVRPDGDDAGANTPPRLKAVASLHGILAPISPGTGGEDGAGLAADDAALAVPRVLVLHATADPFVPPEQVRAMEEELSRRGARLEVVRYGGSAMHAFTRPEKTSQVDRDAGLSYCKYAEEDSWRRVVELLREEFA 368
BLAST of mRNA_L-elsbetiae_contig920.18224.1 vs. uniprot
Match: A0A836CLU0_9STRA (Dienelactone hydrolase family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLU0_9STRA) HSP 1 Score: 181 bits (460), Expect = 2.400e-50 Identity = 114/274 (41.61%), Postives = 145/274 (52.92%), Query Frame = 1 Query: 88 WNIRRSVVDYNDG-GTALQGLYARPEGEGLPDRLPGVILAHTAVGPQEDMILWKLDAIARLGYAAFALDMFGTGHALWDRAQSLAARRPITEDRSLMQGRVMAAVRTLGQMEEVDQEKLAAVGYCFGGMAVLDLARMARPDVEGDEDKAPLTVKAVASLHGILAPILP----------GAGCKVSDDXXXXXXXXXXXXXXXXPFVPPDQVQAMELEFLRRGAN-LEIVRYGGEALHAFTRPEKTHHTDKHAGLSYCKHADEDSWRRVVGLLRE 873 ++++R +V Y D G LQG RP + + LP V++AHTAVG Q+D++L LD +A LGY AF LDMFG G A+WDR QSLAAR P+T DRSL+ R AA+ Q+ VD ++A VGYCFGG+ LD R A + A + HGILAP P GC+V PFVPPDQV+A E E G ++ Y G A HAFTRPEK +D+ AGL Y A E W + G L + Sbjct: 37 FDLQRQIVPYIDHTGLPLQGFVVRPAAQAA-ESLPCVLVAHTAVGIQDDLLLQILDGVAGLGYVAFGLDMFGAGQAVWDREQSLAARAPLTSDRSLLARRAEAALHCATQLRGVDARRVAVVGYCFGGIVALDTVR------------AGCGIAAAITFHGILAPPPPDQDLSWCKHYSTGCRV-----------LVLHGGADPFVPPDQVRAFEAEMAAAGVQQCSVIVYDG-ARHAFTRPEKVLDSDRSAGLFYDAAAAEAGWAAMRGCLEQ 285
BLAST of mRNA_L-elsbetiae_contig920.18224.1 vs. uniprot
Match: A0A7S0HUL7_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HUL7_9CRYP) HSP 1 Score: 171 bits (432), Expect = 2.560e-46 Identity = 109/264 (41.29%), Postives = 140/264 (53.03%), Query Frame = 1 Query: 94 IRRSVVDYNDGGTALQGLYARPEGEGLPDRLPGVILAHTAVGPQEDMILWKLDAIARLGYAAFALDMFGTGHALWDRAQSLAARRPITEDRSLMQGRVMAAVRTLGQMEEVDQEKLAAVGYCFGGMAVLDLARMA-RPDVEGDEDKAPLTVKAVASLHGILA-PILPGAGCKVSDDXXXXXXXXXXXXXXXXPFVPPDQVQAMELEFLRRGANLEIVRYGGEALHAFTRPEKTHHTDKHAGLSYCKHADEDSWRRVVGLLREEL 879 +++S V Y++GG L G P+ ++P V+L HTAVG QED + WKL+A+A LG+ AF DMFGTG ALWDR ++L ARR + DR M RV AA T+ + +VD A+G+CFGGMAVLDLAR P++E A S HGIL P LP PFV + + R +N + Y G A HAFTRPEKT +D AGL Y + AD DS R+ G+LR L Sbjct: 36 LKKSSVSYSEGGRELMGEACWPDVGN--QKMPAVLLVHTAVGLQEDFMRWKLEAVASLGFVAFGADMFGTGRALWDREEALEARRELVCDRRRMIDRVKAAATTMMSLPQVDPRGFGALGFCFGGMAVLDLARSGCMPNLE-----------ATVSFHGILDDPDLPD---DYGGREGPVPGEILVCHGEDDPFVSSENLNLFLENLKLRKSNFHLQAYPG-AKHAFTRPEKTEPSDFSAGLFYNEQADRDSSERMKGMLRRRL 282
BLAST of mRNA_L-elsbetiae_contig920.18224.1 vs. uniprot
Match: A0A0G4EJ35_VITBC (DLH domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EJ35_VITBC) HSP 1 Score: 160 bits (404), Expect = 4.570e-42 Identity = 101/276 (36.59%), Postives = 143/276 (51.81%), Query Frame = 1 Query: 88 WNIRRSVVDYNDGGTALQGLYARPEGEGLPDRL----PGVILAHTAVGPQEDMILWKLDAIARLGYAAFALDMFGTGHALWDRAQSLAARRPITEDRSLMQGRVMAAVRTLGQMEEVDQEKLAAVGYCFGGMAVLDLARMARPDVEGDEDKAPLTVKAVASLHGILA-----PILPGAGCKV-----SDDXXXXXXXXXXXXXXXXPFVPPDQVQAMELEFLRRGANLEIVRYGGEALHAFTRPEKTHHTDKHAGLSYCKHADEDSWRRVVGLLRE 873 W +++ V Y D GT L GL E + ++ P V++ TAVG +ED + LD A LGY AF +DM+G G A+WD+ +S A R+P+T DR+ +Q R++AA + + +V ++ +A VGYCFGGM LDLAR P +K V S HG+L + G C V SDD PF+ PDQ QA + E + + +I YGG A H+FTRPEK D+ AGL YC ++ S+R L++ Sbjct: 42 WTYKQTDVAYQDEGTELMGLAVWVERDDASRQILGERPCVLVCPTAVGLREDFLFGALDRYASLGYVAFGVDMYGEG-AVWDKGRSRAIRQPLTADRTKLQRRMVAAYQAAQSLPQVQEDNIAVVGYCFGGMCALDLARAGVP------------MKGVVSFHGVLDRPAVDKVPGGLSCPVLVHHGSDD----------------PFISPDQFQAFQQELSDQRTDWQIHIYGG-AKHSFTRPEKVTQADRDAGLQYCPKSERRSYRTTKAFLQD 287
BLAST of mRNA_L-elsbetiae_contig920.18224.1 vs. uniprot
Match: A0A7S1HA30_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HA30_HEMAN) HSP 1 Score: 157 bits (396), Expect = 4.910e-42 Identity = 93/215 (43.26%), Postives = 115/215 (53.49%), Query Frame = 1 Query: 226 EDMILWKLDAIARLGYAAFALDMFGTGHALWDRAQSLAARRPITEDRSLMQGRVMAAVRTLGQMEEVDQEKLAAVGYCFGGMAVLDLARMARPDVEGDEDKAPLTVKAVASLHGILAPILPGAGCKVSDDXXXXXXXXXXXXXXXXPFVPPDQVQAMELEFLRRGA-NLEIVRYGGEALHAFTRPEKTHHTDKHAGLSYCKHADEDSWRRVVGLL 867 ED + WKLD +A GY AF +DMFG G ALWD+ ++LAAR+P+ EDRS M R+M A T ME D ++ A+GYCFGGMAVLDLAR P ++KA SLHGIL ++ PFV P+ ++ E + R A +L I Y G HAFTRPEKT D AGL YC+ AD SW LL Sbjct: 1 EDFMFWKLDKLASQGYLAFGVDMFGAGRALWDKEEALAARKPLREDRSQMIERMMCAYETACSMEVADSARVGAIGYCFGGMAVLDLARSGLPK----------SLKATVSLHGILD--------RLDTPPTDVVGKVLVCHGGSDPFVTPEMLRDFESDMAARNAEDLHIHTYSGSK-HAFTRPEKTTEGDSAAGLYYCELADAASWAAASALL 196
BLAST of mRNA_L-elsbetiae_contig920.18224.1 vs. uniprot
Match: A0A7S2XY83_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY83_9STRA) HSP 1 Score: 140 bits (353), Expect = 3.420e-34 Identity = 93/247 (37.65%), Postives = 122/247 (49.39%), Query Frame = 1 Query: 88 WNIRRSVVDYNDGGTA-LQGLYARPEGE--------GLPDRLPGVILAHTAVGPQEDMILWKLDAIARLGYAAFALDMFGT------GHALWDRAQSLAARRPITEDRSLMQGRVMAAVRTLGQMEEVDQEKLAAVGYCFGGMAVLDLARMARPDVEGDEDKAPLTVKAVASLHGILAPILPGAGCKVSDDXXXXXXXXXXXXXXXXPFVPPDQVQAMELEFLRRGANLEIVRYGGEALHAFTRPEK 783 + IRR+ + Y+D A L GL A P + LP +LPGV++AHTAVG +D ILWKL+AIA LGYAAFALDM+G WDRA + RR + EDR Q R A VD+ ++AA+GYC+GGM VLDLA+ P +K V ++HGIL D PFV +Q+ A + + + + I + G HAFTRPEK Sbjct: 94 YTIRRTKIPYSDSTQARLSGLLAWPVQDPLPPAGAPALPPKLPGVLVAHTAVGNGDDFILWKLEAIASLGYAAFALDMYGEEASGAHNEGAWDRAVNAEVRRSLREDRLSQQARARAGYEVFASQPMVDESRMAALGYCYGGMVVLDLAKSGVP------------LKGVGTMHGIL-------DVPKELDTSLIQCPVQLYHGKADPFVSQEQLVAFQEDMNKNDISWNIHSFPGIG-HAFTRPEK 320
BLAST of mRNA_L-elsbetiae_contig920.18224.1 vs. uniprot
Match: A0A5Q0BHN0_9GAMM (Dienelactone hydrolase family protein n=1 Tax=Candidatus Methylospira mobilis TaxID=1808979 RepID=A0A5Q0BHN0_9GAMM) HSP 1 Score: 134 bits (337), Expect = 4.860e-33 Identity = 85/262 (32.44%), Postives = 131/262 (50.00%), Query Frame = 1 Query: 94 IRRSVVDYNDGGTALQGLYARPEGEGLPDRLPGVILAHTAVGPQEDMILWKLDAIARLGYAAFALDMFGTGHALWDRAQSLAARRPITEDRSLMQGRVMAAVRTLGQMEEVDQEKLAAVGYCFGGMAVLDLARMARPDVEGDEDKAPLTVKAVASLHGILAPILPGAGCKVSDDXXXXXXXXXXXXXXXXPFVPPDQVQAMELEFLRRGANLEIVRYGGEALHAFTRPEKTHHTDKHAGLSYCKHADEDSWRRVVGLLREEL 879 IR +V+Y+ LQG +A + + P PGV+++H+ VG +++ + K A+A G+AAFALDM+G G + ++ +P +DR+L+QGR+++A+ L +EEVD K+AA+G+CFGG+ VLDLAR + ++ VAS HG+L + P PP+ V A++ E GA+ + Y +HAFT P D G Y AD SW ++ L E L Sbjct: 3 IRTRLVEYHHDNVTLQGFFAWDDSKATPQ--PGVLISHSWVG-RDEFVCRKAIALAEAGHAAFALDMYGAGKTGSNPQENELLMKPFMQDRTLLQGRILSALHALRSLEEVDANKIAAIGFCFGGLCVLDLARTG------------IDIQGVASFHGLLT-------APENIPPHPISARILALHGHNDPLAPPEHVTALQKELTAAGADWQTHVYSN-TVHAFTNPLAN---DPGFGTVYNPAADRRSWTSLLNFLHEVL 238
BLAST of mRNA_L-elsbetiae_contig920.18224.1 vs. uniprot
Match: A0A8D4VLE6_9GAMM (Carboxymethylenebutenolidase n=1 Tax=Methylogaea oryzae TaxID=1295382 RepID=A0A8D4VLE6_9GAMM) HSP 1 Score: 132 bits (333), Expect = 1.780e-32 Identity = 93/262 (35.50%), Postives = 125/262 (47.71%), Query Frame = 1 Query: 94 IRRSVVDYNDGGTALQGLYARPEGEGLPDRLPGVILAHTAVGPQEDMILWKLDAIARLGYAAFALDMFGTGHALWDRAQSLAARRPITEDRSLMQGRVMAAVRTLGQMEEVDQEKLAAVGYCFGGMAVLDLARMARPDVEGDEDKAPLTVKAVASLHGILAPILPGAGCKVSDDXXXXXXXXXXXXXXXXPFVPPDQVQAMELEFLRRGANLEIVRYGGEALHAFTRPEKTHHTDKHAGLSYCKHADEDSWRRVVGLLREEL 879 ++ +DY DG T LQG A + + P LPGV++AH G E ++ K IA LGYA FALDM+G + A P EDR+L+Q R+ A+ L + EVD ++AA+G+CFGG+ VLDLAR D+ G S HG+L P PG + D P P + V A++ E GA+ ++ YG +HAFT P D G Y AD SWR +V L E L Sbjct: 2 LQTKTIDYCDGATRLQGYLAYDDAK--PGPLPGVLIAHPWAGRNE-FVMDKARCIAELGYAGFALDMYGDARVGEGAEECSALMMPFMEDRALLQRRMACALEALRRQPEVDAARVAAMGFCFGGLCVLDLARSGA-DLRG-----------AVSFHGLLKP--PG-----NTDGNAIQAKVLVLHGHDDPMAPVEDVTALKEELTAAGADWQVHVYGN-TVHAFTNPLAN---DPGFGTVYNAAADRRSWRSLVNFLAEVL 237
BLAST of mRNA_L-elsbetiae_contig920.18224.1 vs. uniprot
Match: A0A4V1Z9F2_9GAMM (Dienelactone hydrolase family protein n=2 Tax=Methylococcaceae TaxID=403 RepID=A0A4V1Z9F2_9GAMM) HSP 1 Score: 132 bits (333), Expect = 1.820e-32 Identity = 93/259 (35.91%), Postives = 127/259 (49.03%), Query Frame = 1 Query: 106 VVDYNDGGTALQGLYARPEGEGLPDRLPGVILAHTAVGPQEDMILWKLDAIARLGYAAFALDMFGTGHALWDRAQSLAARRPITEDRSLMQGRVMAAVRTLGQMEEVDQEKLAAVGYCFGGMAVLDLARMARPDVEGDEDKAPLTVKAVASLHGILAPILPGAGCKVSDDXXXXXXXXXXXXXXXXPFVPPDQVQAMELEFLRRGANLEIVRYGGEALHAFTRPEKTHHTDKHAGLSYCKHADEDSWRRVVGLLREELS 882 +DY G L+G A E LP LP V++AH A G ++D + K +A LGYAAFALDM+G G Q+ +P DR+L+QGR+ A+ + + +VD +++AA+G+CFGG+ VLDLAR G E ++ V S HG+ +P AG P VPP+QV A+ E GA+ +I YG HAFT P D G Y AD SW + LRE L+ Sbjct: 7 TIDYRHGPQPLEGFLAYDES--LPGPLPAVLIAH-AWGGRDDFVCGKARRLAELGYAAFALDMYGKGVLGTGPEQNAQLMQPFMADRALLQGRMQQALEVVKALPQVDPDRVAAMGFCFGGLCVLDLAR------SGAE------LRGVISFHGLF---VPPAGVP----NQPIRAKVLALHGYDDPMVPPEQVTALAQELTAAGADWQIHMYG-RTTHAFTNPAAN---DPGFGTVYDATADARSWLSLQSFLREVLT 239
BLAST of mRNA_L-elsbetiae_contig920.18224.1 vs. uniprot
Match: A0A7S1J2W1_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J2W1_9EUGL) HSP 1 Score: 131 bits (330), Expect = 1.920e-32 Identity = 87/219 (39.73%), Postives = 110/219 (50.23%), Query Frame = 1 Query: 250 DAIARLGYAAFALDMFGTGHALWDRAQSLAARRPITEDRSLMQGRVMAAV---------RTLGQMEEVDQEKLAAVGYCFGGMAVLDLARMARPDVEGDEDKAPLTVKAVASLHGILAPILPGAGCKVSDDXXXXXXXXXXXXXXXXPFVPPDQVQAMELEFLRRGANLEIVRYGGEALHAFTRPEKTHHTDKHAGLSYCKHADEDSWRRVVGLLREEL 879 +A+A LGY AFA+DM G G ALWD A++ AR P+ EDR L++ R+ AA+ + LG +D +++AAVGYCFGG+ VLDLAR P + G V S HGIL G G + PFVPPD+ + E RR A LE V + G A H FTRPEK D AG Y AD SW + L + L Sbjct: 1 EALASLGYVAFAVDMLGAGRALWDGAEAKTARAPLYEDRRLLRSRMQAALTAASADSFAQALGPNVALDLDRVAAVGYCFGGLCVLDLARGNAPGLRG-----------VVSFHGIL----DGGGLP-DPETDALRPRILVHNGDADPFVPPDKREQFLAEMGRRHAPLEFVSHPG-ARHGFTRPEKVQPADFAAGFGYDPQADAASWGSMKAFLADVL 202 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig920.18224.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig920.18224.1 >prot_L-elsbetiae_contig920.18224.1 ID=prot_L-elsbetiae_contig920.18224.1|Name=mRNA_L-elsbetiae_contig920.18224.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=218bp MILWKLDAIARLGYAAFALDMFGTGHALWDRAQSLAARRPITEDRSLMQGback to top mRNA from alignment at L-elsbetiae_contig920:14474..17086+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig920.18224.1 ID=mRNA_L-elsbetiae_contig920.18224.1|Name=mRNA_L-elsbetiae_contig920.18224.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2613bp|location=Sequence derived from alignment at L-elsbetiae_contig920:14474..17086+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig920:14474..17086+ >mRNA_L-elsbetiae_contig920.18224.1 ID=mRNA_L-elsbetiae_contig920.18224.1|Name=mRNA_L-elsbetiae_contig920.18224.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1308bp|location=Sequence derived from alignment at L-elsbetiae_contig920:14474..17086+ (Laminarionema elsbetiae ELsaHSoW15)back to top |