mRNA_L-elsbetiae_contig9192.18212.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9192.18212.1 vs. uniprot
Match: A0A6H5JYJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYJ7_9PHAE) HSP 1 Score: 192 bits (489), Expect = 3.390e-60 Identity = 87/122 (71.31%), Postives = 103/122 (84.43%), Query Frame = 1 Query: 1 QPFPTMYWLSCPSLKAAVSQLENQGLISEWERRLQADTALLTEQQAAHKLYSEERWALLVPEDVEVIRKRGWKASYVGGVGGIVNPYNIKCMHCHFAHYLATGSNVVGRWTQEALDARMHLP 366 QPFPTMYWLSCPSLKAAVSQLENQGLI EWERRLQAD ++ + +AAHK Y+EERW+LL EDV+ I+++GW+ S+ GV GIV P +IKC+H HFAH+LATG NVVG+WTQEALDA HLP Sbjct: 80 QPFPTMYWLSCPSLKAAVSQLENQGLILEWERRLQADPGIMADMEAAHKSYAEERWSLLSAEDVDTIKRQGWEKSFSNGVAGIVQPRHIKCLHTHFAHFLATGRNVVGKWTQEALDAGKHLP 201
BLAST of mRNA_L-elsbetiae_contig9192.18212.1 vs. uniprot
Match: A0A6G0NZP4_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6G0NZP4_9STRA) HSP 1 Score: 120 bits (302), Expect = 9.370e-32 Identity = 55/118 (46.61%), Postives = 80/118 (67.80%), Query Frame = 1 Query: 1 QPFPTMYWLSCPSLKAAVSQLENQGLISEWERRLQADTALLTEQQAAHKLYSEERWALLVPEDVEVIRKRGWKASYVG-GVGGIVNPYNIKCMHCHFAHYLATGSNVVGRWTQEALDA 351 +PFPT+YWLS LKA VS LE+Q L+ +RRL AD + + +H+ Y+E+RW ++ P D+E+++ R W+ G+ GI N+KC+H H+AHYLATG+N+VG W QE LD+ Sbjct: 90 EPFPTIYWLSSTELKARVSALEDQQLVLALQRRLDADDPAKQKMKQSHREYAEQRWLMMTPRDLELVKGRRWEFFLRDVGIAGIREYTNVKCLHTHYAHYLATGNNLVGEWVQELLDS 207
BLAST of mRNA_L-elsbetiae_contig9192.18212.1 vs. uniprot
Match: A0A3R7HVX3_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HVX3_9STRA) HSP 1 Score: 118 bits (296), Expect = 6.750e-31 Identity = 54/118 (45.76%), Postives = 80/118 (67.80%), Query Frame = 1 Query: 1 QPFPTMYWLSCPSLKAAVSQLENQGLISEWERRLQADTALLTEQQAAHKLYSEERWALLVPEDVEVIRKRGWKASYVG-GVGGIVNPYNIKCMHCHFAHYLATGSNVVGRWTQEALDA 351 +PFPT+YWL+ LKA VS LE++ + E +RRL+AD A + H+ Y+E+RW +L D+ V++ RGW+ G+ GI + N+KC+H H+AHYLATG+N++G W QE LD+ Sbjct: 86 EPFPTIYWLASTELKARVSTLEDEQYVMELQRRLEADEASKEKMAQNHREYAEQRWRMLTEHDLGVVKGRGWEFVLRDVGIAGIRDFTNVKCLHTHYAHYLATGNNLIGEWVQELLDS 203
BLAST of mRNA_L-elsbetiae_contig9192.18212.1 vs. uniprot
Match: G4ZX89_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZX89_PHYSP) HSP 1 Score: 114 bits (285), Expect = 2.960e-29 Identity = 52/117 (44.44%), Postives = 76/117 (64.96%), Query Frame = 1 Query: 1 QPFPTMYWLSCPSLKAAVSQLENQGLISEWERRLQADTALLTEQQAAHKLYSEERWALLVPEDVEVIRKRGWKASYVG-GVGGIVNPYNIKCMHCHFAHYLATGSNVVGRWTQEALD 348 +PFPT+YWL+ LKA VS LE+Q + + RL AD A + +H+ Y+E+RW ++ D+E+++ R W+ G+ GI N+KC+H H+AHYLATG+N+VG W QE LD Sbjct: 85 EPFPTIYWLASTELKARVSALEDQQFVLTLQHRLDADEAAKQRMKESHREYAEQRWRMMTAHDLELVKGRRWEFFLRDVGIAGIREYTNVKCLHTHYAHYLATGNNLVGEWVQELLD 201
BLAST of mRNA_L-elsbetiae_contig9192.18212.1 vs. uniprot
Match: D0NKV2_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NKV2_PHYIT) HSP 1 Score: 113 bits (283), Expect = 4.470e-29 Identity = 51/117 (43.59%), Postives = 75/117 (64.10%), Query Frame = 1 Query: 1 QPFPTMYWLSCPSLKAAVSQLENQGLISEWERRLQADTALLTEQQAAHKLYSEERWALLVPEDVEVIRKRGWKASYVG-GVGGIVNPYNIKCMHCHFAHYLATGSNVVGRWTQEALD 348 +PFPT+YWL+ LKA VS LE+Q + + RL D A +H+ Y+E+RW ++ P D+E+++ R W+ G+ GI + N+KC+H H+AHYLATG+N +G W QE LD Sbjct: 81 EPFPTIYWLASAELKARVSTLEDQQFVLSLQHRLDTDQAAKERMAQSHREYAEQRWNMMTPHDLELVKGRRWEFVLRDVGIAGIRDFTNVKCLHTHYAHYLATGNNQIGEWVQELLD 197
BLAST of mRNA_L-elsbetiae_contig9192.18212.1 vs. uniprot
Match: H3HCG6_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HCG6_PHYRM) HSP 1 Score: 113 bits (282), Expect = 4.630e-29 Identity = 52/118 (44.07%), Postives = 77/118 (65.25%), Query Frame = 1 Query: 1 QPFPTMYWLSCPSLKAAVSQLENQGLISEWERRLQADTALLTEQQAAHKLYSEERWALLVPEDVEVIRKRGWKASYVG-GVGGIVNPYNIKCMHCHFAHYLATGSNVVGRWTQEALDA 351 +PFPT+YWL+ LKA VS LE+Q + + RL AD A + +H+ Y+E+RW ++ P D E+++ R W+ G+ GI N+KC+H H+AHYLATG+N+VG W QE L++ Sbjct: 62 EPFPTIYWLASTELKARVSTLEDQQYVLTLQHRLDADEAAKEKMAQSHREYAEQRWRMMTPHDRELVKGRRWEFFLRDVGIAGIREFTNVKCLHTHYAHYLATGNNLVGEWVQELLNS 179
BLAST of mRNA_L-elsbetiae_contig9192.18212.1 vs. uniprot
Match: A0A225VD34_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VD34_9STRA) HSP 1 Score: 112 bits (279), Expect = 1.930e-28 Identity = 50/119 (42.02%), Postives = 77/119 (64.71%), Query Frame = 1 Query: 1 QPFPTMYWLSCPSLKAAVSQLENQGLISEWERRLQADTALLTEQQAAHKLYSEERWALLVPEDVEVIRKRGWKASYVG-GVGGIVNPYNIKCMHCHFAHYLATGSNVVGRWTQEALDAR 354 +PFPT+YWL+ LKA VS LE+Q + + RL D A + +H+ Y+E+RW ++ P D+E++ R W+ G+ GI + ++KC+H H+AHYLATG+N +G W QE LD++ Sbjct: 80 EPFPTIYWLASTELKARVSTLEDQQYVLTLQHRLDTDEAAKEKMAQSHREYAEQRWKMMTPHDLELVEGRRWEFVLRDVGIAGIRDFTSVKCLHTHYAHYLATGNNQIGEWVQELLDSK 198
BLAST of mRNA_L-elsbetiae_contig9192.18212.1 vs. uniprot
Match: M4BYE9_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BYE9_HYAAE) HSP 1 Score: 111 bits (277), Expect = 3.480e-28 Identity = 50/117 (42.74%), Postives = 74/117 (63.25%), Query Frame = 1 Query: 1 QPFPTMYWLSCPSLKAAVSQLENQGLISEWERRLQADTALLTEQQAAHKLYSEERWALLVPEDVEVIRKRGWKASYVG-GVGGIVNPYNIKCMHCHFAHYLATGSNVVGRWTQEALD 348 +PFPT+YWLS P LKA VS LE+Q + + RL + + H+ Y+ ERW ++ P+DV +++ R W+ G+ GI + N+KC+H H+AHYLATG N++G W QE L+ Sbjct: 76 EPFPTIYWLSSPELKARVSALEDQQFVLTLQHRLDTNEGAKEKMAQCHREYAAERWNMMTPDDVALVKGRRWEFVLRDVGIAGIRDFTNVKCLHTHYAHYLATGKNLIGEWVQELLN 192
BLAST of mRNA_L-elsbetiae_contig9192.18212.1 vs. uniprot
Match: A0A1W0AC20_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AC20_9STRA) HSP 1 Score: 111 bits (278), Expect = 4.150e-28 Identity = 56/126 (44.44%), Postives = 79/126 (62.70%), Query Frame = 1 Query: 1 QPFPTMYWLSCPSLKAAVSQLENQGLISEWERRLQADTALLTEQQAAHKLYSEERWALLVPEDVEVIRKRGWKASYVG-GVGGIVNPYNIKCMHCHFAHYLATGSNVVGRWTQEALDARMHLPADA 375 +PFPT YWL+ LK VS LE G + + RL A+ E + AH+ Y++ RW+LL P D++VI+ + W+ + G+ GI N ++KC+H H+AHYLAT SN+VG+W EAL M L A A Sbjct: 96 EPFPTTYWLASTELKEKVSILEGMGFVEIFTDRLVANPQYAKEMEDAHQSYADFRWSLLTPRDIQVIKAKQWEHAIKDVGIAGIRNRASVKCLHTHYAHYLATKSNLVGKWVHEAL---MDLKATA 218
BLAST of mRNA_L-elsbetiae_contig9192.18212.1 vs. uniprot
Match: W2QG84_PHYPN (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2QG84_PHYPN) HSP 1 Score: 110 bits (275), Expect = 7.130e-28 Identity = 50/118 (42.37%), Postives = 76/118 (64.41%), Query Frame = 1 Query: 1 QPFPTMYWLSCPSLKAAVSQLENQGLISEWERRLQADTALLTEQQAAHKLYSEERWALLVPEDVEVIRKRGWKASYVG-GVGGIVNPYNIKCMHCHFAHYLATGSNVVGRWTQEALDA 351 +PFPT+YWL+ LKA VS LE+Q + + RL D A + +H+ Y+E+RW ++ D+E+++ R W+ G+ GI + N+KC+H H+AHYLATG+N +G W QE LD+ Sbjct: 81 EPFPTIYWLASTELKARVSTLEDQQYVLSLQHRLDTDEAAKEKMAQSHREYAEQRWNMMTAHDLELVKGRCWEFVLRDVGIAGIRDFTNVKCLHTHYAHYLATGNNQIGEWVQELLDS 198 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9192.18212.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9192.18212.1 >prot_L-elsbetiae_contig9192.18212.1 ID=prot_L-elsbetiae_contig9192.18212.1|Name=mRNA_L-elsbetiae_contig9192.18212.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=122bp MYWLSCPSLKAAVSQLENQGLISEWERRLQADTALLTEQQAAHKLYSEERback to top mRNA from alignment at L-elsbetiae_contig9192:660..1270+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9192.18212.1 ID=mRNA_L-elsbetiae_contig9192.18212.1|Name=mRNA_L-elsbetiae_contig9192.18212.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=611bp|location=Sequence derived from alignment at L-elsbetiae_contig9192:660..1270+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9192:660..1270+ >mRNA_L-elsbetiae_contig9192.18212.1 ID=mRNA_L-elsbetiae_contig9192.18212.1|Name=mRNA_L-elsbetiae_contig9192.18212.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=732bp|location=Sequence derived from alignment at L-elsbetiae_contig9192:660..1270+ (Laminarionema elsbetiae ELsaHSoW15)back to top |