prot_L-elsbetiae_contig9189.18206.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9189.18206.1
Unique Nameprot_L-elsbetiae_contig9189.18206.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length494
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig9189.18206.1 vs. uniprot
Match: A0A6H5JUY3_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUY3_9PHAE)

HSP 1 Score: 443 bits (1139), Expect = 6.970e-148
Identity = 345/559 (61.72%), Postives = 366/559 (65.47%), Query Frame = 0 
Query:    3 PQESS---WQQDMAAGYGSEPKRMRLSGAAAXXXXXT------------------RASTGANVVMTNKGSVYKAQRGRAVTAAAAVKAKAPTTHRRRGRRGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFAESAVCNFDSEHEADCQAEIHKQRQLVQQQQLAEDRAHH----------AQLHGGSFSVGREEFDDLEEYHRGMDEAT-CSSE--DGEGMGMDEPLHGED-----DEERDGGE------------NGLDDGE-------MSEEGVDGDGDGFEEDDGLLGGGGRTGRSVS-SYSSVMSTGSMSDGDSGXXXXXXGGHNCSRSAGSSPRCEVTAXXXXXXXXXXXXXXXXXXXXXXXXXXXAGNNESGDMQVQQRGRCSSGESDCSSDFVRSSLMREVSQSST-QEGMGFPVAEDLLGYEMQSWYRCQDDDDRSPAASGESHFESQLQQQQPFMGRQQQ--------SEELWGTAVGANLGWGFGDFAQTYSDGGSRASSGSMTSSNLSCDDEYLPSALPPLMGMSAGEA 493
            PQESS   ++Q   A Y +EPKRMRLSGAA  XXXX                   RASTGA   MTNKGSVYKAQRGRAV+AAA VKAKAPTTHRRRGRRGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFA+SAVCNFDSEHEAD QA IHKQRQL+                      AQLHGGSFSVGREEFDDLEEYHRGMDEAT CSSE  DGEG+  +E LHG+D     D+   G E            NG DD E       MS+EG    GD +EED G++GGGG +GRS+S SYSS MSTG         XXXXX               EV         XXXXXXXXXXXXXXXXXXXX   +       QQRGRCSSGESDCSS+FV  SL+RE S SST QEGMGFPVAEDLLGYEMQSWY CQ                                       SEELWGTAVGANLGWGFGDFAQ YSDGGSRASSGSM+SS LSCDDEY+PSALPPLMGMSA EA
Sbjct:    4 PQESSSGSFRQHEVAEYATEPKRMRLSGAAKSXXXXXXXXXXXXXXXXXXXXXXXRASTGAPTAMTNKGSVYKAQRGRAVSAAA-VKAKAPTTHRRRGRRGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFADSAVCNFDSEHEADRQAVIHKQRQLLXXXXXXXXXXXXXXXXXXXXXXAQLHGGSFSVGREEFDDLEEYHRGMDEATTCSSEEDDGEGLDNEESLHGDDIDDDIDDSVHGEEEDHRRGRXXXRLNGDDDDELPAAECDMSDEG----GDRYEED-GVIGGGGSSGRSMSCSYSSAMSTGXXXX-----XXXXXXXXXXXXXXXXXXXXEVATVADGSAFXXXXXXXXXXXXXXXXXXXXXXXDLHTQQLEQQRGRCSSGESDCSSEFVTPSLLREESLSSTTQEGMGFPVAEDLLGYEMQSWYCCQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEELWGTAVGANLGWGFGDFAQMYSDGGSRASSGSMSSS-LSCDDEYVPSALPPLMGMSATEA 550
[Close]
BLAST of mRNA_L-elsbetiae_contig9189.18206.1 vs. uniprot
Match: D8LM11_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM11_ECTSI)

HSP 1 Score: 300 bits (769), Expect = 1.850e-94
Identity = 253/432 (58.56%), Postives = 277/432 (64.12%), Query Frame = 0 
Query:   99 AVIYKERKQLYLGVYESEVDAAKAHDRAARFHFAESAVCNFDSEHEADCQAEIHKQRQLVQQQQLAEDRAHH----------AQLHGGSFSVGREEFDDLEEYHRGMDEAT-CSSE--DGEGMGMDEPLHGED-----------DEERDGGENGLD-----------DGEMSEEGVDGDGDGFEEDDGLLGGGGRTGRSVS-SYSSVMSTGSMSDGDSGXXXXXXGGHNCSRSAGSSPRCEVTAXXXXXXXXXXXXXXXXXXXXXXXXXXXAGNNESGDMQVQQRGRCSSGESDCSSDFVRSSLMREVSQSST-QEGMGFPVAEDLLGYEMQSWYRCQDDDDRSPAASGESHFESQLQQQQPFMGRQQQSEELWGTAVGANLGWGFGDFAQTYSDGGSRASSGSMTSSNLSCDDEYLPSALPPLMGMSAGEA 493
            +V++  + +LYLGVYESEVDAAKAHDRAARFHFA+SAVCNFDSEHEAD QA IHKQRQL+                      AQLHGGSFSVGREEFDDLEEYHRGMDEAT CSSE  DGEG+  DE LHG+D            EE D     LD           +G+MS+EG    GD +EED G++GGGG +GRS+S SYSS MSTGSMSDG   XXXXXX                   XXXXXXXXXXXXXXXXXXXXXXXXXXX   +       QQRGRCSSGESDCSSDFV  SL+RE S SST QEGMGFPVAEDLLGYEMQSWY CQDD++RSP+ SG                                          TYSDGGSRASSGSM+SS LSCDDEY+ SALPPLMGMSA EA
Sbjct:   10 SVLFSPKYKLYLGVYESEVDAAKAHDRAARFHFADSAVCNFDSEHEADRQAVIHKQRQLLXXXXXXXXXXXXXXXXXXXXXXAQLHGGSFSVGREEFDDLEEYHRGMDEATTCSSEEDDGEGLDNDESLHGDDIDDDIEDSVHGGEEEDHRRGRLDXXXXXXELPAAEGDMSDEG----GDRYEED-GVIGGGGTSGRSMSCSYSSAMSTGSMSDGXXXXXXXXX-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLHAQQLEQQRGRCSSGESDCSSDFVTPSLLREESMSSTTQEGMGFPVAEDLLGYEMQSWYCCQDDEERSPSTSG-----------------------------------------GTYSDGGSRASSGSMSSS-LSCDDEYVSSALPPLMGMSATEA 387
[Close]
BLAST of mRNA_L-elsbetiae_contig9189.18206.1 vs. uniprot
Match: A0A836CI56_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI56_9STRA)

HSP 1 Score: 118 bits (295), Expect = 3.730e-27
Identity = 55/66 (83.33%), Postives = 61/66 (92.42%), Query Frame = 0 
Query:   74 THRRRGRRGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFAESAVCNF 139
            T RRRGR+GKS+YRGVCVTREGKWRAVIYKERKQLYLGV+ESE+DAAKAHDRAAR+HF   A+ NF
Sbjct:   19 TARRRGRKGKSIYRGVCVTREGKWRAVIYKERKQLYLGVFESEIDAAKAHDRAARYHFGAQAMVNF 84
[Close]
BLAST of mRNA_L-elsbetiae_contig9189.18206.1 vs. uniprot
Match: D7FZ71_ECTSI (AP2/ERF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ71_ECTSI)

HSP 1 Score: 122 bits (306), Expect = 6.980e-26
Identity = 58/74 (78.38%), Postives = 67/74 (90.54%), Query Frame = 0 
Query:   73 TTHRRRGRRGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFAESAVCNFDSEHEAD 146
            T  RRRGR+G+S+YRGVCVTREGKWRAVIYKERKQLYLGVYESE++AAKAHDRAARFHF + ++ NF +E EAD
Sbjct:  130 TPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKSMTNFATEAEAD 203
[Close]
BLAST of mRNA_L-elsbetiae_contig9189.18206.1 vs. uniprot
Match: A0A6H5LCQ5_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCQ5_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 9.560e-26
Identity = 58/74 (78.38%), Postives = 67/74 (90.54%), Query Frame = 0 
Query:   73 TTHRRRGRRGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFAESAVCNFDSEHEAD 146
            T  RRRGR+G+S+YRGVCVTREGKWRAVIYKERKQLYLGVYESE++AAKAHDRAARFHF + ++ NF +E EAD
Sbjct:  117 TPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKSMTNFATEAEAD 190
[Close]
BLAST of mRNA_L-elsbetiae_contig9189.18206.1 vs. uniprot
Match: A0A836CH07_9STRA (AP2/ERF domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH07_9STRA)

HSP 1 Score: 100 bits (250), Expect = 1.070e-22
Identity = 47/54 (87.04%), Postives = 50/54 (92.59%), Query Frame = 0 
Query:   86 YRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFAESAVCNF 139
            YRGVCVTREGKWRAVIYKERKQLYLGV+ESEVDAAKAHDRAAR HF + A+ NF
Sbjct:    1 YRGVCVTREGKWRAVIYKERKQLYLGVFESEVDAAKAHDRAARQHFGDQAMVNF 54
[Close]
BLAST of mRNA_L-elsbetiae_contig9189.18206.1 vs. uniprot
Match: A0A6V1UZI2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UZI2_HETAK)

HSP 1 Score: 83.6 bits (205), Expect = 2.470e-14
Identity = 40/63 (63.49%), Postives = 51/63 (80.95%), Query Frame = 0 
Query:   77 RRGRRGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFAESAVCNF 139
            RRG RG+S ++GVCVTR GKWR+VIY  RKQLYLGV+E+E +AAKA+D +A  +F + AV NF
Sbjct:  143 RRGPRGQSQFKGVCVTRAGKWRSVIYVGRKQLYLGVFETEQEAAKAYDNSAVKYFGDGAVLNF 205
[Close]
BLAST of mRNA_L-elsbetiae_contig9189.18206.1 vs. uniprot
Match: D8LFR4_ECTSI (Pathogenesis-related transcriptional factor and ERF n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFR4_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 2.550e-14
Identity = 42/63 (66.67%), Postives = 50/63 (79.37%), Query Frame = 0 
Query:   77 RRGRRGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFAESAVCNF 139
            RRG RG+S ++GVC+TR GKWRAVIY  RKQ YLGV++SE DAA+A+D AA  HFAE A  NF
Sbjct:  341 RRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNF 403
[Close]
BLAST of mRNA_L-elsbetiae_contig9189.18206.1 vs. uniprot
Match: A0A7S3Y6J2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6J2_HETAK)

HSP 1 Score: 83.6 bits (205), Expect = 3.020e-14
Identity = 40/63 (63.49%), Postives = 51/63 (80.95%), Query Frame = 0 
Query:   77 RRGRRGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFAESAVCNF 139
            RRG RG+S ++GVCVTR GKWR+VIY  RKQLYLGV+E+E +AAKA+D +A  +F + AV NF
Sbjct:  156 RRGPRGQSQFKGVCVTRAGKWRSVIYVGRKQLYLGVFETEQEAAKAYDNSAVKYFGDGAVLNF 218
[Close]
BLAST of mRNA_L-elsbetiae_contig9189.18206.1 vs. uniprot
Match: A0A6H5KQM0_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM0_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 3.750e-14
Identity = 42/63 (66.67%), Postives = 50/63 (79.37%), Query Frame = 0 
Query:   77 RRGRRGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFAESAVCNF 139
            RRG RG+S ++GVC+TR GKWRAVIY  RKQ YLGV++SE DAA+A+D AA  HFAE A  NF
Sbjct:  399 RRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNF 461
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9189.18206.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUY3_9PHAE6.970e-14861.72AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. ... [more]
D8LM11_ECTSI1.850e-9458.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CI56_9STRA3.730e-2783.33AP2/ERF domain-containing protein n=1 Tax=Tribonem... [more]
D7FZ71_ECTSI6.980e-2678.38AP2/ERF domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5LCQ5_9PHAE9.560e-2678.38AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. ... [more]
A0A836CH07_9STRA1.070e-2287.04AP2/ERF domain-containing protein (Fragment) n=1 T... [more]
A0A6V1UZI2_HETAK2.470e-1463.49Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D8LFR4_ECTSI2.550e-1466.67Pathogenesis-related transcriptional factor and ER... [more]
A0A7S3Y6J2_HETAK3.020e-1463.49Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6H5KQM0_9PHAE3.750e-1466.67AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 85..146
e-value: 4.9E-9
score: 46.0
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 85..140
score: 12.51
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10coord: 85..142
e-value: 2.6E-11
score: 45.2
NoneNo IPR availablePANTHERPTHR32467:SF118ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7coord: 81..159
NoneNo IPR availablePANTHERPTHR32467FAMILY NOT NAMEDcoord: 81..159
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 84..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9189contigL-elsbetiae_contig9189:136..3661 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9189.18206.1mRNA_L-elsbetiae_contig9189.18206.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9189 78..3707 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9189.18206.1 ID=prot_L-elsbetiae_contig9189.18206.1|Name=mRNA_L-elsbetiae_contig9189.18206.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=494bp
MAPQESSWQQDMAAGYGSEPKRMRLSGAAAAAATTTRASTGANVVMTNKG
SVYKAQRGRAVTAAAAVKAKAPTTHRRRGRRGKSVYRGVCVTREGKWRAV
IYKERKQLYLGVYESEVDAAKAHDRAARFHFAESAVCNFDSEHEADCQAE
IHKQRQLVQQQQLAEDRAHHAQLHGGSFSVGREEFDDLEEYHRGMDEATC
SSEDGEGMGMDEPLHGEDDEERDGGENGLDDGEMSEEGVDGDGDGFEEDD
GLLGGGGRTGRSVSSYSSVMSTGSMSDGDSGGGGGHRGGHNCSRSAGSSP
RCEVTAAAAAAAAAFATVVAPPSVAIAGGGGGVAGNNESGDMQVQQRGRC
SSGESDCSSDFVRSSLMREVSQSSTQEGMGFPVAEDLLGYEMQSWYRCQD
DDDRSPAASGESHFESQLQQQQPFMGRQQQSEELWGTAVGANLGWGFGDF
AQTYSDGGSRASSGSMTSSNLSCDDEYLPSALPPLMGMSAGEA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR036955AP2/ERF_dom_sf
IPR016177DNA-bd_dom_sf