mRNA_L-elsbetiae_contig9189.18206.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9189.18206.1 vs. uniprot
Match: A0A6H5JUY3_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUY3_9PHAE) HSP 1 Score: 442 bits (1138), Expect = 3.210e-147 Identity = 345/559 (61.72%), Postives = 366/559 (65.47%), Query Frame = 2 Query: 53 PQESS---WQQDMAAGYGSEPKRMRLSGAAXXXXXXT------------------RASTGANVVMTNKGSVYKAQRGRAVTAAAAVKAKAPTTHRRRGRRGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFAESAVCNFDSEHEADCQAEIHKQRQLVQQQQLAEDRAHH----------AQLHGGSFSVGREEFDDLEEYHRGMDEAT-CSSE--DGEGMGMDEPLHGED-----DEERDGGE------------NGLDDGE-------MSEEGVDGDGDGFEEDDGLLGGGGRTGRSVS-SYSSVMSTGSMSDGDSGXXXXXXGGHNCSRSAGSSPRCEVTAXXXXXXXXXXXXXXXXXXXXXXXXXXXAGNNESGDMQVQQRGRCSSGESDCSSDFVRSSLMREVSQSST-QEGMGFPVAEDLLGYEMQSWYRCQDDDDRSPAASGESHFESQLQQQQPFMGRQQQ--------SEELWGTAVGANLGWGFGDFAQTYSDGGSRASSGSMTSSNLSCDDEYLPSALPPLMGMSAGEA 1525 PQESS ++Q A Y +EPKRMRLSGAA XXXX RASTGA MTNKGSVYKAQRGRAV+AAA VKAKAPTTHRRRGRRGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFA+SAVCNFDSEHEAD QA IHKQRQL+ AQLHGGSFSVGREEFDDLEEYHRGMDEAT CSSE DGEG+ +E LHG+D D+ G E NG DD E MS+EG GD +EED G++GGGG +GRS+S SYSS MSTG XXXXX EV XXXXXXXXXXXXXXXXXXXX + QQRGRCSSGESDCSS+FV SL+RE S SST QEGMGFPVAEDLLGYEMQSWY CQ SEELWGTAVGANLGWGFGDFAQ YSDGGSRASSGSM+SS LSCDDEY+PSALPPLMGMSA EA Sbjct: 4 PQESSSGSFRQHEVAEYATEPKRMRLSGAAKSXXXXXXXXXXXXXXXXXXXXXXXRASTGAPTAMTNKGSVYKAQRGRAVSAAA-VKAKAPTTHRRRGRRGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFADSAVCNFDSEHEADRQAVIHKQRQLLXXXXXXXXXXXXXXXXXXXXXXAQLHGGSFSVGREEFDDLEEYHRGMDEATTCSSEEDDGEGLDNEESLHGDDIDDDIDDSVHGEEEDHRRGRXXXRLNGDDDDELPAAECDMSDEG----GDRYEED-GVIGGGGSSGRSMSCSYSSAMSTGXXXX-----XXXXXXXXXXXXXXXXXXXXEVATVADGSAFXXXXXXXXXXXXXXXXXXXXXXXDLHTQQLEQQRGRCSSGESDCSSEFVTPSLLREESLSSTTQEGMGFPVAEDLLGYEMQSWYCCQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEELWGTAVGANLGWGFGDFAQMYSDGGSRASSGSMSSS-LSCDDEYVPSALPPLMGMSATEA 550
BLAST of mRNA_L-elsbetiae_contig9189.18206.1 vs. uniprot
Match: D8LM11_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM11_ECTSI) HSP 1 Score: 300 bits (767), Expect = 1.020e-93 Identity = 253/432 (58.56%), Postives = 277/432 (64.12%), Query Frame = 2 Query: 341 AVIYKERKQLYLGVYESEVDAAKAHDRAARFHFAESAVCNFDSEHEADCQAEIHKQRQLVQQQQLAEDRAHH----------AQLHGGSFSVGREEFDDLEEYHRGMDEAT-CSSE--DGEGMGMDEPLHGED-----------DEERDGGENGLD-----------DGEMSEEGVDGDGDGFEEDDGLLGGGGRTGRSVS-SYSSVMSTGSMSDGDSGXXXXXXGGHNCSRSAGSSPRCEVTAXXXXXXXXXXXXXXXXXXXXXXXXXXXAGNNESGDMQVQQRGRCSSGESDCSSDFVRSSLMREVSQSST-QEGMGFPVAEDLLGYEMQSWYRCQDDDDRSPAASGESHFESQLQQQQPFMGRQQQSEELWGTAVGANLGWGFGDFAQTYSDGGSRASSGSMTSSNLSCDDEYLPSALPPLMGMSAGEA 1525 +V++ + +LYLGVYESEVDAAKAHDRAARFHFA+SAVCNFDSEHEAD QA IHKQRQL+ AQLHGGSFSVGREEFDDLEEYHRGMDEAT CSSE DGEG+ DE LHG+D EE D LD +G+MS+EG GD +EED G++GGGG +GRS+S SYSS MSTGSMSDG XXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXX + QQRGRCSSGESDCSSDFV SL+RE S SST QEGMGFPVAEDLLGYEMQSWY CQDD++RSP+ SG TYSDGGSRASSGSM+SS LSCDDEY+ SALPPLMGMSA EA Sbjct: 10 SVLFSPKYKLYLGVYESEVDAAKAHDRAARFHFADSAVCNFDSEHEADRQAVIHKQRQLLXXXXXXXXXXXXXXXXXXXXXXAQLHGGSFSVGREEFDDLEEYHRGMDEATTCSSEEDDGEGLDNDESLHGDDIDDDIEDSVHGGEEEDHRRGRLDXXXXXXELPAAEGDMSDEG----GDRYEED-GVIGGGGTSGRSMSCSYSSAMSTGSMSDGXXXXXXXXX-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLHAQQLEQQRGRCSSGESDCSSDFVTPSLLREESMSSTTQEGMGFPVAEDLLGYEMQSWYCCQDDEERSPSTSG-----------------------------------------GTYSDGGSRASSGSMSSS-LSCDDEYVSSALPPLMGMSATEA 387
BLAST of mRNA_L-elsbetiae_contig9189.18206.1 vs. uniprot
Match: A0A836CI56_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI56_9STRA) HSP 1 Score: 118 bits (295), Expect = 5.130e-27 Identity = 55/66 (83.33%), Postives = 61/66 (92.42%), Query Frame = 2 Query: 266 THRRRGRRGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFAESAVCNF 463 T RRRGR+GKS+YRGVCVTREGKWRAVIYKERKQLYLGV+ESE+DAAKAHDRAAR+HF A+ NF Sbjct: 19 TARRRGRKGKSIYRGVCVTREGKWRAVIYKERKQLYLGVFESEIDAAKAHDRAARYHFGAQAMVNF 84
BLAST of mRNA_L-elsbetiae_contig9189.18206.1 vs. uniprot
Match: D7FZ71_ECTSI (AP2/ERF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ71_ECTSI) HSP 1 Score: 122 bits (306), Expect = 1.050e-25 Identity = 58/74 (78.38%), Postives = 67/74 (90.54%), Query Frame = 2 Query: 263 TTHRRRGRRGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFAESAVCNFDSEHEAD 484 T RRRGR+G+S+YRGVCVTREGKWRAVIYKERKQLYLGVYESE++AAKAHDRAARFHF + ++ NF +E EAD Sbjct: 130 TPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKSMTNFATEAEAD 203
BLAST of mRNA_L-elsbetiae_contig9189.18206.1 vs. uniprot
Match: A0A6H5LCQ5_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCQ5_9PHAE) HSP 1 Score: 122 bits (306), Expect = 1.480e-25 Identity = 58/74 (78.38%), Postives = 67/74 (90.54%), Query Frame = 2 Query: 263 TTHRRRGRRGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFAESAVCNFDSEHEAD 484 T RRRGR+G+S+YRGVCVTREGKWRAVIYKERKQLYLGVYESE++AAKAHDRAARFHF + ++ NF +E EAD Sbjct: 117 TPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKSMTNFATEAEAD 190
BLAST of mRNA_L-elsbetiae_contig9189.18206.1 vs. uniprot
Match: A0A836CH07_9STRA (AP2/ERF domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH07_9STRA) HSP 1 Score: 100 bits (250), Expect = 1.280e-22 Identity = 47/54 (87.04%), Postives = 50/54 (92.59%), Query Frame = 2 Query: 302 YRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFAESAVCNF 463 YRGVCVTREGKWRAVIYKERKQLYLGV+ESEVDAAKAHDRAAR HF + A+ NF Sbjct: 1 YRGVCVTREGKWRAVIYKERKQLYLGVFESEVDAAKAHDRAARQHFGDQAMVNF 54
BLAST of mRNA_L-elsbetiae_contig9189.18206.1 vs. uniprot
Match: A0A6V1UZI2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UZI2_HETAK) HSP 1 Score: 83.6 bits (205), Expect = 2.790e-14 Identity = 40/63 (63.49%), Postives = 51/63 (80.95%), Query Frame = 2 Query: 275 RRGRRGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFAESAVCNF 463 RRG RG+S ++GVCVTR GKWR+VIY RKQLYLGV+E+E +AAKA+D +A +F + AV NF Sbjct: 143 RRGPRGQSQFKGVCVTRAGKWRSVIYVGRKQLYLGVFETEQEAAKAYDNSAVKYFGDGAVLNF 205
BLAST of mRNA_L-elsbetiae_contig9189.18206.1 vs. uniprot
Match: D8LFR4_ECTSI (Pathogenesis-related transcriptional factor and ERF n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFR4_ECTSI) HSP 1 Score: 85.9 bits (211), Expect = 3.020e-14 Identity = 42/63 (66.67%), Postives = 50/63 (79.37%), Query Frame = 2 Query: 275 RRGRRGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFAESAVCNF 463 RRG RG+S ++GVC+TR GKWRAVIY RKQ YLGV++SE DAA+A+D AA HFAE A NF Sbjct: 341 RRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNF 403
BLAST of mRNA_L-elsbetiae_contig9189.18206.1 vs. uniprot
Match: A0A7S3Y6J2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6J2_HETAK) HSP 1 Score: 83.6 bits (205), Expect = 3.430e-14 Identity = 40/63 (63.49%), Postives = 51/63 (80.95%), Query Frame = 2 Query: 275 RRGRRGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFAESAVCNF 463 RRG RG+S ++GVCVTR GKWR+VIY RKQLYLGV+E+E +AAKA+D +A +F + AV NF Sbjct: 156 RRGPRGQSQFKGVCVTRAGKWRSVIYVGRKQLYLGVFETEQEAAKAYDNSAVKYFGDGAVLNF 218
BLAST of mRNA_L-elsbetiae_contig9189.18206.1 vs. uniprot
Match: A0A6H5KQM0_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM0_9PHAE) HSP 1 Score: 85.9 bits (211), Expect = 4.510e-14 Identity = 42/63 (66.67%), Postives = 50/63 (79.37%), Query Frame = 2 Query: 275 RRGRRGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFAESAVCNF 463 RRG RG+S ++GVC+TR GKWRAVIY RKQ YLGV++SE DAA+A+D AA HFAE A NF Sbjct: 399 RRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNF 461 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9189.18206.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9189.18206.1 >prot_L-elsbetiae_contig9189.18206.1 ID=prot_L-elsbetiae_contig9189.18206.1|Name=mRNA_L-elsbetiae_contig9189.18206.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=494bp MAPQESSWQQDMAAGYGSEPKRMRLSGAAAAAATTTRASTGANVVMTNKGback to top mRNA from alignment at L-elsbetiae_contig9189:78..3707- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9189.18206.1 ID=mRNA_L-elsbetiae_contig9189.18206.1|Name=mRNA_L-elsbetiae_contig9189.18206.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3630bp|location=Sequence derived from alignment at L-elsbetiae_contig9189:78..3707- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9189:78..3707- >mRNA_L-elsbetiae_contig9189.18206.1 ID=mRNA_L-elsbetiae_contig9189.18206.1|Name=mRNA_L-elsbetiae_contig9189.18206.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2964bp|location=Sequence derived from alignment at L-elsbetiae_contig9189:78..3707- (Laminarionema elsbetiae ELsaHSoW15)back to top |