prot_L-elsbetiae_contig9023.18046.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9023.18046.1
Unique Nameprot_L-elsbetiae_contig9023.18046.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length331
Homology
BLAST of mRNA_L-elsbetiae_contig9023.18046.1 vs. uniprot
Match: A0A6H5KEE9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KEE9_9PHAE)

HSP 1 Score: 439 bits (1129), Expect = 2.200e-151
Identity = 238/331 (71.90%), Postives = 261/331 (78.85%), Query Frame = 0
Query:    1 ASQSIHDGVTRLTLVYKANPSEAASKSMSKEMGGFCQQMVASLTLLSSVGASRAMVSYFSVGVRAVLHSVKDLIEALLDPSRQARLNGLTGMVWQSCKELQQAPKTNKLACRRQMMQWSVAVKDTIDEFAEXXXXXXXXXXXXXXXXXXTTDLDEQFAAKVTVGGKESGEDKGKG-YDDLDFDDMDEDYSTAELQCVQASIDILRVFRRCLKVANESFNTLDSARSKGAEDEAAAEAVGEGWLKRKLEWAISVQAHLQDANEYAGEVGVLLYPPLDGGELLGRANDLERSMISFCDVFYACDEGGDGGGESPLQKAVEEKLGALRAAVEAL 330
            ASQSIHDGVTRL LVYKANPSE AS+SMS+EMGGFCQQMVASLTLLSSVGAS++MV+YFS GVRAVLHSVKDLI ALLDPSR ARLNGLTG VWQ+CKELQQAPKTNKLACRRQMMQWSVAVKDTIDEF E                     LDEQFAAKVTVGG   GE   +G +DD DFD MDE+Y  AEL CV+AS+D+LRVFRRCLK AN+S N+LDS   +  E  A A   GEGWL+ KLEWA SVQ HL DANE AGEVGVLLYPPLDGGELLGRANDLE+S+ +F +VF A  EG +   ESPL+KAV EKLG LRAA+E L
Sbjct:   55 ASQSIHDGVTRLNLVYKANPSEVASESMSREMGGFCQQMVASLTLLSSVGASKSMVTYFSAGVRAVLHSVKDLIGALLDPSRHARLNGLTGTVWQTCKELQQAPKTNKLACRRQMMQWSVAVKDTIDEFVEAAKTAAMANAGKSESAGDKGGLDEQFAAKVTVGGAGEGEVGAEGTFDDFDFDGMDENYGAAELSCVEASVDVLRVFRRCLKAANDSLNSLDSPEPQ-EESGATAGPAGEGWLQGKLEWAKSVQTHLDDANECAGEVGVLLYPPLDGGELLGRANDLEKSLAAFFEVFSAGGEGTNSEMESPLRKAVVEKLGVLRAALEKL 384          
BLAST of mRNA_L-elsbetiae_contig9023.18046.1 vs. uniprot
Match: A0A836CN71_9STRA (Grap2 and cyclin-D-interacting-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN71_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.060e-25
Identity = 96/335 (28.66%), Postives = 149/335 (44.48%), Query Frame = 0
Query:    1 ASQSIHDGVTRLTLVYKANPSEAASKSMSKEMGGFCQQMVASLT--LLSSVGASRAMVSYFSVGVRAVLHSVKDLIEALL-DPSRQARLNGLTGMVWQSCKELQQAPKTNKLACRRQMMQWSVAVKDTIDEF-----AEXXXXXXXXXXXXXXXXXXTTDLDEQFAAKVTVGGKESGEDKGKGYDDL----DFDDMDED-YSTAELQCVQASIDILRVFRRCLKVANESFNTLDSARSKGAEDEAAAEAVGEGWLKRKLEWAISVQAHLQDANEYAGEVGVLLYPPLDGGELLGRANDLERSMISFCDVFYACDEGGDGGGESPLQKAVEEKLGA 322
            A+ SI    TR TL++K  P    +  M  EMG     + +SL   L    G S ++       VRAV  ++ +L++++   PS +   N LTG +W++CK + + P TNKLA R Q+M  S+++KDTIDEF     A                   + D       K     ++   D    +DDL    D +  DED  S AE +   A +++LR  R C+K AN++                 A A G G  +  + WA  +   +Q   E  G+VG+ LYPP++G  ++  A+     + +  D   A  E  D      L+  + E+L A
Sbjct:   60 AANSISGSSTRFTLLFKTAPPPEITAGMVNEMGSLSDHLASSLAVALAPEQGVSPSLAVAIIGAVRAVQVALLELVKSVAAGPSTEPEWNHLTGALWEACKGVAEVPTTNKLAVRMQLMCVSMSIKDTIDEFKAALEAAEAADGGLSGEVSALSISGSADNQSHEPGKTADSARDEAVDS---FDDLVDYMDGEGADEDAMSPAEAEAAAAVVELLRTSRACIKTANDAM----------------AAATGSGAARGVMAWAGPLCEEVQSLAEQVGDVGMALYPPMEGAAVVAAADGFGARVTACLDKVDAAQER-DAAAVEHLRGVLTERLDA 374          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9023.18046.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KEE9_9PHAE2.200e-15171.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CN71_9STRA1.060e-2528.66Grap2 and cyclin-D-interacting-domain-containing p... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 313..330
NoneNo IPR availablePFAMPF13324GCIPcoord: 2..288
e-value: 5.7E-22
score: 78.6
NoneNo IPR availablePANTHERPTHR15492:SF1CYCLIN-D1-BINDING PROTEIN 1coord: 3..297
IPR026907Cyclin-D1-binding protein 1PANTHERPTHR15492CYCLIN D1-BINDING PROTEIN 1coord: 3..297

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9023contigL-elsbetiae_contig9023:5456..7393 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9023.18046.1mRNA_L-elsbetiae_contig9023.18046.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9023 5456..7393 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9023.18046.1 ID=prot_L-elsbetiae_contig9023.18046.1|Name=mRNA_L-elsbetiae_contig9023.18046.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=331bp
ASQSIHDGVTRLTLVYKANPSEAASKSMSKEMGGFCQQMVASLTLLSSVG
ASRAMVSYFSVGVRAVLHSVKDLIEALLDPSRQARLNGLTGMVWQSCKEL
QQAPKTNKLACRRQMMQWSVAVKDTIDEFAEAAKAAALANAGNPGDPGDT
TDLDEQFAAKVTVGGKESGEDKGKGYDDLDFDDMDEDYSTAELQCVQASI
DILRVFRRCLKVANESFNTLDSARSKGAEDEAAAEAVGEGWLKRKLEWAI
SVQAHLQDANEYAGEVGVLLYPPLDGGELLGRANDLERSMISFCDVFYAC
DEGGDGGGESPLQKAVEEKLGALRAAVEAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026907CCNDBP1