mRNA_L-elsbetiae_contig8847.17871.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig8847.17871.1
Unique NamemRNA_L-elsbetiae_contig8847.17871.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig8847.17871.1 vs. uniprot
Match: A0A6H5KEG1_9PHAE (SMC hinge domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEG1_9PHAE)

HSP 1 Score: 285 bits (729), Expect = 2.190e-87
Identity = 146/151 (96.69%), Postives = 149/151 (98.68%), Query Frame = 1 
Query:   82 STLVSDFVGVQIKVSFVAAGETFLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSSENPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHALPREEALGFVANIMNEEEAVGVELQQPASAVRPK 534
            +TLVSDFVGVQIKVSFVAAGETFLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSS+NPTQFITTTFRPEMVAVASQCYGISHQNKVSNIH LPR+EALGFVANIMNEEEAVGVELQQPASA RPK
Sbjct:  745 TTLVSDFVGVQIKVSFVAAGETFLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSSDNPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHVLPRQEALGFVANIMNEEEAVGVELQQPASAARPK 895
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BLAST of mRNA_L-elsbetiae_contig8847.17871.1 vs. uniprot
Match: D8LEU4_ECTSI (Structural maintenance of chromosomes protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEU4_ECTSI)

HSP 1 Score: 279 bits (713), Expect = 1.170e-83
Identity = 143/148 (96.62%), Postives = 146/148 (98.65%), Query Frame = 1 
Query:   82 STLVSDFVGVQIKVSFVAAGETFLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSSENPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHALPREEALGFVANIMNEEEAVGVELQQPASAV 525
            +TLVSDFVGVQIKVSFVAAGETFLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSS+NPTQFITTTFRPEMVAVASQCYGISHQNKVSNIH LPR+EALGFVANIMNEEEAVGVELQQPASA 
Sbjct: 1169 TTLVSDFVGVQIKVSFVAAGETFLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSSDNPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHVLPRQEALGFVANIMNEEEAVGVELQQPASAA 1316
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BLAST of mRNA_L-elsbetiae_contig8847.17871.1 vs. uniprot
Match: A0A7S1D4Y7_CYCTE (Hypothetical protein n=2 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D4Y7_CYCTE)

HSP 1 Score: 208 bits (529), Expect = 1.600e-64
Identity = 101/135 (74.81%), Postives = 123/135 (91.11%), Query Frame = 1 
Query:   91 VSDFVGVQIKVSFVAAGETFLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSSENPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHALPREEALGFVANIMNEEEAVG 495
            VS + GV IKV F + GE F+MSQLSGGQKA+VALALIF+IQRCDPAPFYLFDE+DQALDS+YRAAVASL+Q QA+S+ENPTQFI +TFRPE+V+VA++CYGISHQNKVS++H L +++AL F+AN+MNEEEAVG
Sbjct:  100 VSLYRGVGIKVRFSSVGENFMMSQLSGGQKALVALALIFSIQRCDPAPFYLFDELDQALDSTYRAAVASLVQHQANSAENPTQFIVSTFRPELVSVANRCYGISHQNKVSSVHHLSKKDALHFIANLMNEEEAVG 234
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BLAST of mRNA_L-elsbetiae_contig8847.17871.1 vs. uniprot
Match: A0A6V1TI32_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TI32_HETAK)

HSP 1 Score: 201 bits (512), Expect = 4.170e-61
Identity = 101/136 (74.26%), Postives = 118/136 (86.76%), Query Frame = 1 
Query:   85 TLVSDFVGVQIKVSFVAAGETFLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSSENPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHALPREEALGFVANIMNEEEAV 492
            T V+ FVGVQI+VSF   GE FLMSQLSGGQKA+VALA+IFAIQRCDPAPFYLFDE+DQALDSSYRA VA+LIQ+QA   +NP QFIT+TFRPE+V+VA + YGISHQNKVSNI+ L +E+AL FV ++MNEEE V
Sbjct:  157 TSVNQFVGVQIRVSFSGDGEQFLMSQLSGGQKALVALAIIFAIQRCDPAPFYLFDELDQALDSSYRAQVAALIQQQARDEDNPAQFITSTFRPELVSVADKTYGISHQNKVSNINPLGKEDALDFVRDLMNEEERV 292
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BLAST of mRNA_L-elsbetiae_contig8847.17871.1 vs. uniprot
Match: A0A7S2ANS6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ANS6_9STRA)

HSP 1 Score: 208 bits (530), Expect = 7.260e-61
Identity = 103/135 (76.30%), Postives = 118/135 (87.41%), Query Frame = 1 
Query:   91 VSDFVGVQIKVSFVAAGETFLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSSENPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHALPREEALGFVANIMNEEEAVG 495
            VSDF GVQ+KVSF   GE FLMSQLSGGQKA+VAL+++FAIQRCDPAPFYLFDE+DQALDS+YRAAVA++IQRQA    NPTQFITTTFRPE+V VA++CYGIS QNK SNIH L + EAL FVA++MNEEE VG
Sbjct:  440 VSDFEGVQVKVSFTPGGEVFLMSQLSGGQKAIVALSIVFAIQRCDPAPFYLFDELDQALDSTYRAAVAAMIQRQASHPTNPTQFITTTFRPELVNVAAKCYGISLQNKNSNIHPLSKGEALSFVADLMNEEEGVG 574
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BLAST of mRNA_L-elsbetiae_contig8847.17871.1 vs. uniprot
Match: A0A7S4R7T2_9STRA (Structural maintenance of chromosomes protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R7T2_9STRA)

HSP 1 Score: 213 bits (542), Expect = 1.640e-60
Identity = 109/157 (69.43%), Postives = 132/157 (84.08%), Query Frame = 1 
Query:   91 VSDFVGVQIKVSFVAAGETFLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSSENPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHALPREEALGFVANIMNEEEAVGVELQQPASAVRPKPPRGGRRAS 561
            V+ + G+ IKV F   GE +LMSQLSGGQKA+VALALIFAIQRCDPAPFYLFDE+DQALDS+YRAAVA+LIQRQA+S ENPTQF+ +TFRPE+VAVA++CYGISHQNKVSNIH L +++AL F+AN+MNEEEAVG E+   A+    +P  G  R+S
Sbjct: 1128 VNMYRGIGIKVRFSRVGENYLMSQLSGGQKALVALALIFAIQRCDPAPFYLFDELDQALDSTYRAAVAALIQRQANSDENPTQFVCSTFRPELVAVANRCYGISHQNKVSNIHVLSKKDALHFIANLMNEEEAVG-EVTSLATTKASRPESGASRSS 1283
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BLAST of mRNA_L-elsbetiae_contig8847.17871.1 vs. uniprot
Match: A0A7S2A7J6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A7J6_TRICV)

HSP 1 Score: 201 bits (512), Expect = 3.550e-60
Identity = 97/135 (71.85%), Postives = 120/135 (88.89%), Query Frame = 1 
Query:   91 VSDFVGVQIKVSFVAAGETFLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSSENPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHALPREEALGFVANIMNEEEAVG 495
            V+ + G+ +KV F    + +LMSQLSGGQKA+VA+ALIFAIQRCDPAPFYLFDE+DQALDSS+RAAVA+LIQRQA S ENPTQF+ +TFRPE+VAV+++CYGISHQNKVSN+H L +++AL F+AN+MNEEEAVG
Sbjct:  238 VNLYRGIGVKVRFTQEEQNYLMSQLSGGQKALVAMALIFAIQRCDPAPFYLFDELDQALDSSHRAAVAALIQRQASSDENPTQFVCSTFRPELVAVSNRCYGISHQNKVSNLHHLSKKDALHFIANLMNEEEAVG 372
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BLAST of mRNA_L-elsbetiae_contig8847.17871.1 vs. uniprot
Match: A0A7S0GJA6_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GJA6_9STRA)

HSP 1 Score: 204 bits (520), Expect = 3.340e-59
Identity = 99/135 (73.33%), Postives = 121/135 (89.63%), Query Frame = 1 
Query:   91 VSDFVGVQIKVSFVAAGETFLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSSENPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHALPREEALGFVANIMNEEEAVG 495
            VS + GV++KV F A GE ++MSQLSGGQKA+VA+ LIFAIQRCDPAPFYLFDE+DQALDSS+RA+VA+LIQRQA S ENPTQFI +TFRPE+V VA++CYGISHQNKVS+IH L +++A+ F+AN+MNEEEAVG
Sbjct:  482 VSLYRGVEVKVRFSAVGENYMMSQLSGGQKALVAMGLIFAIQRCDPAPFYLFDELDQALDSSHRASVANLIQRQASSEENPTQFIVSTFRPELVKVANRCYGISHQNKVSSIHHLGKKDAMHFIANLMNEEEAVG 616
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BLAST of mRNA_L-elsbetiae_contig8847.17871.1 vs. uniprot
Match: A0A6A5A6S3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A6S3_9STRA)

HSP 1 Score: 202 bits (515), Expect = 7.200e-59
Identity = 100/131 (76.34%), Postives = 117/131 (89.31%), Query Frame = 1 
Query:  100 FVGVQIKVSFVAAGETFLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSSENPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHALPREEALGFVANIMNEEEAV 492
            FVGVQIKV+F   G+++LMSQLSGGQKA+VALA IFAIQRCDPAPFYLFDEIDQALDS++RAAVA+LIQRQAHS ENP QFIT+TFRPE+V VA Q YGISHQNK+SNI  + +EE+L F+A+IM +EEAV
Sbjct:  455 FVGVQIKVNFRGEGDSYLMSQLSGGQKALVALAFIFAIQRCDPAPFYLFDEIDQALDSTHRAAVAALIQRQAHSDENPAQFITSTFRPELVMVADQFYGISHQNKISNIQPMSKEESLAFIADIMADEEAV 585
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BLAST of mRNA_L-elsbetiae_contig8847.17871.1 vs. uniprot
Match: A0A836CH46_9STRA (Structural maintenance of chromosomes protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH46_9STRA)

HSP 1 Score: 208 bits (529), Expect = 9.330e-59
Identity = 112/173 (64.74%), Postives = 126/173 (72.83%), Query Frame = 1 
Query:   91 VSDFVGVQIKVSFVAAGETFLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQA---------------------------HSSENPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHALPREEALGFVANIMNEEEAVGVELQQPASAVR 528
            VS + GVQI+VSF   GE  LMSQLSGGQKA+VALALIFAIQRCDPAPFYLFDEIDQALDSSYR A+A+LIQRQA                           HS E PTQFITTTFRPE+V+VA++ YGISHQNKVSNI  + REEALGFVA I++EEEAVG +L QP +  R
Sbjct: 1102 VSQYTGVQIRVSFTGTGEAHLMSQLSGGQKALVALALIFAIQRCDPAPFYLFDEIDQALDSSYRGALAALIQRQASMRSALHARQASAARALLSDITFVHRAHSQETPTQFITTTFRPELVSVAARAYGISHQNKVSNIELMTREEALGFVAEILHEEEAVGTKLAQPTAQRR 1274
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8847.17871.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KEG1_9PHAE2.190e-8796.69SMC hinge domain-containing protein n=1 Tax=Ectoca... [more]
D8LEU4_ECTSI1.170e-8396.62Structural maintenance of chromosomes protein n=1 ... [more]
A0A7S1D4Y7_CYCTE1.600e-6474.81Hypothetical protein n=2 Tax=Cyclophora tenuis Tax... [more]
A0A6V1TI32_HETAK4.170e-6174.26Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2ANS6_9STRA7.260e-6176.30Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S4R7T2_9STRA1.640e-6069.43Structural maintenance of chromosomes protein n=1 ... [more]
A0A7S2A7J6_TRICV3.550e-6071.85Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S0GJA6_9STRA3.340e-5973.33Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A6A5A6S3_9STRA7.200e-5976.34Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A836CH46_9STRA9.330e-5964.74Structural maintenance of chromosomes protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8847contigL-elsbetiae_contig8847:1749..4225 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score280.4
Seed ortholog evalue6.2e-73
Seed eggNOG ortholog2880.D8LEU4
Preferred nameSMC3
KEGG koko:K06669
KEGG Pathwayko04110,ko04111,ko04113,ko04114,map04110,map04111,map04113,map04114
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000070,GO:0000228,GO:0000278,GO:0000280,GO:0000724,GO:0000725,GO:0000775,GO:0000779,GO:0000780,GO:0000785,GO:0000790,GO:0000793,GO:0000794,GO:0000795,GO:0000798,GO:0000800,GO:0000819,GO:0000922,GO:0001736,GO:0001737,GO:0001738,GO:0002009,GO:0002165,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003774,GO:0003777,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005604,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005819,GO:0005829,GO:0005856,GO:0005911,GO:0006139,GO:0006259,GO:0006275,GO:0006281,GO:0006302,GO:0006310,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0007064,GO:0007088,GO:0007127,GO:0007129,GO:0007130,GO:0007131,GO:0007135,GO:0007164,GO:0007275,GO:0007346,GO:0007399,GO:0007444,GO:0007472,GO:0007476,GO:0007552,GO:0007560,GO:0008092,GO:0008094,GO:0008104,GO:0008150,GO:0008152,GO:0008156,GO:0008278,GO:0008544,GO:0009506,GO:0009507,GO:0009536,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009913,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010564,GO:0010605,GO:0010948,GO:0015630,GO:0015631,GO:0016043,GO:0016301,GO:0016310,GO:0016363,GO:0016462,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0019538,GO:0019827,GO:0019899,GO:0019900,GO:0019901,GO:0019953,GO:0022008,GO:0022402,GO:0022413,GO:0022414,GO:0022607,GO:0030030,GO:0030054,GO:0030154,GO:0030182,GO:0030435,GO:0030437,GO:0030855,GO:0030892,GO:0030893,GO:0031012,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032505,GO:0032875,GO:0032876,GO:0032886,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0033554,GO:0034085,GO:0034086,GO:0034087,GO:0034088,GO:0034293,GO:0034399,GO:0034502,GO:0034613,GO:0034641,GO:0034990,GO:0034991,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035295,GO:0035315,GO:0035316,GO:0035317,GO:0035821,GO:0035825,GO:0036033,GO:0036211,GO:0040012,GO:0040017,GO:0042623,GO:0042802,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043388,GO:0043412,GO:0043900,GO:0043902,GO:0043903,GO:0043934,GO:0043935,GO:0044085,GO:0044087,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044403,GO:0044419,GO:0044421,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044703,GO:0044788,GO:0044789,GO:0044791,GO:0044794,GO:0044877,GO:0045132,GO:0045143,GO:0045144,GO:0045786,GO:0045934,GO:0046483,GO:0046982,GO:0046983,GO:0048285,GO:0048468,GO:0048487,GO:0048513,GO:0048518,GO:0048519,GO:0048523,GO:0048524,GO:0048563,GO:0048569,GO:0048646,GO:0048699,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048856,GO:0048869,GO:0050789,GO:0050792,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051098,GO:0051099,GO:0051101,GO:0051128,GO:0051171,GO:0051172,GO:0051177,GO:0051179,GO:0051276,GO:0051321,GO:0051493,GO:0051641,GO:0051702,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051817,GO:0051851,GO:0055044,GO:0060147,GO:0060236,GO:0060255,GO:0060429,GO:0060562,GO:0060966,GO:0060968,GO:0061775,GO:0061780,GO:0061982,GO:0061983,GO:0062022,GO:0062023,GO:0065007,GO:0065009,GO:0070013,GO:0070192,GO:0070193,GO:0070507,GO:0070601,GO:0070727,GO:0070840,GO:0071168,GO:0071704,GO:0071840,GO:0071921,GO:0071960,GO:0071962,GO:0072686,GO:0080090,GO:0090169,GO:0090224,GO:0090304,GO:0090329,GO:0097159,GO:0097431,GO:0098687,GO:0098727,GO:0098813,GO:0099086,GO:0120036,GO:0140013,GO:0140014,GO:0140096,GO:1900368,GO:1901360,GO:1901363,GO:1901564,GO:1901673,GO:1902115,GO:1902186,GO:1902188,GO:1903046,GO:1903047,GO:1903900,GO:1903902,GO:1990414,GO:2000104,GO:2000112,GO:2000113
EggNOG free text desc.maintenance of mitotic sister chromatid cohesion, centromeric
EggNOG OGsCOG1196@1,KOG0964@2759
COG Functional cat.D
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00535,ko03036
Exons4
Model size571
Cds size570
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8847.17871.1prot_L-elsbetiae_contig8847.17871.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig8847 1749..4224 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816962.5185916-CDS-L-elsbetiae_contig8847:1748..18681622816962.5185916-CDS-L-elsbetiae_contig8847:1748..1868Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8847 1749..1868 +
1691683944.7096536-CDS-L-elsbetiae_contig8847:1748..18681691683944.7096536-CDS-L-elsbetiae_contig8847:1748..1868Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8847 1749..1868 +
1622816962.5395634-CDS-L-elsbetiae_contig8847:2328..24691622816962.5395634-CDS-L-elsbetiae_contig8847:2328..2469Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8847 2329..2469 +
1691683944.7343192-CDS-L-elsbetiae_contig8847:2328..24691691683944.7343192-CDS-L-elsbetiae_contig8847:2328..2469Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8847 2329..2469 +
1622816962.550957-CDS-L-elsbetiae_contig8847:3160..33131622816962.550957-CDS-L-elsbetiae_contig8847:3160..3313Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8847 3161..3313 +
1691683944.7475202-CDS-L-elsbetiae_contig8847:3160..33131691683944.7475202-CDS-L-elsbetiae_contig8847:3160..3313Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8847 3161..3313 +
1622816962.5618312-CDS-L-elsbetiae_contig8847:4068..42241622816962.5618312-CDS-L-elsbetiae_contig8847:4068..4224Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8847 4069..4224 +
1691683944.7649465-CDS-L-elsbetiae_contig8847:4068..42241691683944.7649465-CDS-L-elsbetiae_contig8847:4068..4224Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8847 4069..4224 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig8847.17871.1

>prot_L-elsbetiae_contig8847.17871.1 ID=prot_L-elsbetiae_contig8847.17871.1|Name=mRNA_L-elsbetiae_contig8847.17871.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=190bp
GKARGPEGGGEEGGGEDGGVEPNGLSPSTLVSDFVGVQIKVSFVAAGETF
LMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASL
IQRQAHSSENPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHALPREEA
LGFVANIMNEEEAVGVELQQPASAVRPKPPRGGRRASSSG
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mRNA from alignment at L-elsbetiae_contig8847:1749..4225+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig8847.17871.1 ID=mRNA_L-elsbetiae_contig8847.17871.1|Name=mRNA_L-elsbetiae_contig8847.17871.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2477bp|location=Sequence derived from alignment at L-elsbetiae_contig8847:1749..4225+ (Laminarionema elsbetiae ELsaHSoW15)
GGAAAGGCGAGAGGTCCGGAAGGAGGCGGCGAGGAGGGGGGCGGGGAGGA
TGGGGGCGTGGAGCCCAACGGCCTGTCGCCGTCCACCTTGGTCAGCGACT
TCGTCGGGGTGCAGATCAAGGTGCGTACGCTCCGGTCCTCGTCGTCGCCG
CCGCTGCCGCCGCCGCCGCTGCTGCTGCTGCCGCTGCTGCTGCTGCTGCT
GCTGCTGCTGTTGCTGCTGATGTTATGCTATTGTTGTTTTTGTTGCCGTC
GTCGTGGCTGCTGGTGCTGGTGCTGGTGCCGGTGCTGCCGGCGCTGGTGC
CGGTGCTGACGCTGCTTGCTGCTGCTATATACTGATGTTCTTGTCGTTGT
TGTCCTCTTTGTTATCGTTGGTTCGTTTGCCATGACCGGGGTGTACCTCA
ACAGTTCGCGATTTCGCCGATGTGTCACCCTGTCACCATGTTGAGCGGGC
TGCCGCTCTGTCGTGGTTGTTTCTGCCCTCTGTATTTTATCCCTTCATCT
TTGATTATCCTTTCCGCGTATGTATGTACTTCTATGTATGGATGTATGTA
TGCGTCCTCCTTGCTGTCGCCGTCTGCCAGGTGTCGTTCGTGGCTGCGGG
AGAGACCTTCCTGATGTCGCAGCTGTCGGGGGGGCAGAAGGCCGTGGTGG
CCCTCGCCCTGATCTTCGCGATTCAGCGCTGCGACCCCGCACCTTTCTAC
CTGTTCGACGAGATCGACCAGGTGTGAGAGTGAGATAGCAACGCGGCGTC
GACCCGCTTTTTTTATTGGTGTATACAAGTGTCAGCAGTCTACGTTCAGT
CTGTGAAGAAGTCGTTCCAGAGGGACTATTGTAGGCGTACTAACTCCCTG
TTTCCCCATCCCAGATATACTCGCACAAAGTCCGTATTTATGTAGTTCAT
TTGTTTTTTTGTGAAATTTCGCTGTTGTCTCGCGGCTGTCTGGTTTTGGG
GACCCGGCGTCGGCCGCGTGGCTTCGGATACTGCTCAGCTGCCGCCCTCT
GTAGCATCTTTCGTCCCACTCGGAGTGCTCTCTCTCTCTCTGTGTCCGTG
CAGCACCAGAGACGGTCAACACAGCAGTTGCCCCGTTACTCTTGGGATGG
GTGGCTCCTCCGGGAATCCATTGCCCCGTTACTCTTGGGATGGGTGGCTC
CTCTAGGGAATCCATCTCAGGGATTGATTTGATTGGCCGGTCCTTCATAC
GCCGGTGAACTGTCTCCAGAAGTGCCGCACAATGCCGCACAATAACCGTT
TCTCTTCTCTCTCTTCCGCTGGGCTCTTGTTAGGGTATTCTTATGTATGT
ATGTATGTATGTATGTATGTATGCACATACATAGGTGCCTTGGTGCTGAT
TTGCTGATTTTGCTTTTCAATGATGTGGTGCCGGAAAACGCAAACATTAC
CCCCCCCCCCAGGCTTTGGACAGCTCGTACCGCGCGGCGGTGGCCTCCCT
GATCCAGAGGCAGGCCCACTCTTCCGAGAACCCTACGCAGTTCATCACCA
CCACGTTCAGGCCGGAGATGGTGGCGGTCGCCAGCCAGTGCTACGGAATC
TCCCACCAGAACAAGGTGCGTGCGTGCGTGCGTGCTTGCGTGCCTGTGTG
TGTGCGTGTGTGTGCCGGCGGCGTCTTTGGTACGATTCCAAGCTTGATGC
GGCAGCAGTATCTATGCGGCCGCCTGTTCAGGTCTGGAAAAGTGGCGTGG
GCTTTGTGCGGACGGACTCTTCTAACAAGCGCTCCGTAAGCTCCCATGAA
ACAAGGTGTGCGCGCGCGCGTGTGGGTATAGTCTATTTACTTCATTCCCC
TGTTGCTGCTCTCATGACTTGGTAGGGTCCTAAAGCTCCGACTAGCGTGG
ATGGATGCCGGAACCCCTGTTACAATTAAGTGTTTCTCGACGACGGGGGG
GGGGGGGATTGGTCGATTGTTCTCTTGCGTCAATGTTGTGTTGGTCGGTT
TGGGGTTGCCAAAGCCGGTCTAAAACATAAAAGGGTGTTGATTTGGAGCC
AGTAAAAACTAAATTTCAGACGTGTTTATGTTGATGTGGTATGTACACGC
TTTAAATAAATAGCGTTCATCGAATATGCTCCGAGTTGGTGGCAATCTCG
CCCCCCCCCCCCCCCCCCCCCCAAAGGGGGGAAACACCCCCCCCTTCCCC
GGGGAAGAAGCCCCGGGGTCGGGGGCCAAAAACAGAAAGGGGGGGGGGGG
GGGGGGNNNNNNNNNNGTGTTTTTTTTGTTGGGGTATATAAACCCTTTAA
AAAAAAAACCTCCACAAAATATGCCCCGGGTTGGGGGCAATCCCCCCCCC
CCCCCCCCCCCTCCCCAAAGGTGAGCAACATCCACGCCTTGCCGCGGGAA
GAAGCTCTCGGGTTCGTGGCCAACATCATGAACGAGGAGGAGGCGGTGGG
GGTGGAGCTGCAACAGCCGGCAAGCGCCGTTCGCCCCAAGCCACCGCGGG
GCGGGCGCCGGGCGAGCAGCAGCGGCG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig8847:1749..4225+

>mRNA_L-elsbetiae_contig8847.17871.1 ID=mRNA_L-elsbetiae_contig8847.17871.1|Name=mRNA_L-elsbetiae_contig8847.17871.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1140bp|location=Sequence derived from alignment at L-elsbetiae_contig8847:1749..4225+ (Laminarionema elsbetiae ELsaHSoW15)
GGAAAGGCGAGAGGTCCGGAAGGAGGCGGCGAGGAGGGGGGCGGGGAGGA
TGGGGGCGTGGAGCCCAACGGCCTGTCGCCGTCCACCTTGGTCAGCGACT
TCGTCGGGGTGCAGATCAAGGGAAAGGCGAGAGGTCCGGAAGGAGGCGGC
GAGGAGGGGGGCGGGGAGGATGGGGGCGTGGAGCCCAACGGCCTGTCGCC
GTCCACCTTGGTCAGCGACTTCGTCGGGGTGCAGATCAAGGTGTCGTTCG
TGGCTGCGGGAGAGACCTTCCTGATGTCGCAGCTGTCGGGGGGGCAGAAG
GCCGTGGTGGCCCTCGCCCTGATCTTCGCGATTCAGCGCTGCGACCCCGC
ACCTTTCTACCTGTTCGACGAGATCGACCAGGTGTCGTTCGTGGCTGCGG
GAGAGACCTTCCTGATGTCGCAGCTGTCGGGGGGGCAGAAGGCCGTGGTG
GCCCTCGCCCTGATCTTCGCGATTCAGCGCTGCGACCCCGCACCTTTCTA
CCTGTTCGACGAGATCGACCAGGCTTTGGACAGCTCGTACCGCGCGGCGG
TGGCCTCCCTGATCCAGAGGCAGGCCCACTCTTCCGAGAACCCTACGCAG
TTCATCACCACCACGTTCAGGCCGGAGATGGTGGCGGTCGCCAGCCAGTG
CTACGGAATCTCCCACCAGAACAAGGCTTTGGACAGCTCGTACCGCGCGG
CGGTGGCCTCCCTGATCCAGAGGCAGGCCCACTCTTCCGAGAACCCTACG
CAGTTCATCACCACCACGTTCAGGCCGGAGATGGTGGCGGTCGCCAGCCA
GTGCTACGGAATCTCCCACCAGAACAAGGTGAGCAACATCCACGCCTTGC
CGCGGGAAGAAGCTCTCGGGTTCGTGGCCAACATCATGAACGAGGAGGAG
GCGGTGGGGGTGGAGCTGCAACAGCCGGCAAGCGCCGTTCGCCCCAAGCC
ACCGCGGGGCGGGCGCCGGGCGAGCAGCAGCGGCGTGAGCAACATCCACG
CCTTGCCGCGGGAAGAAGCTCTCGGGTTCGTGGCCAACATCATGAACGAG
GAGGAGGCGGTGGGGGTGGAGCTGCAACAGCCGGCAAGCGCCGTTCGCCC
CAAGCCACCGCGGGGCGGGCGCCGGGCGAGCAGCAGCGGC
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