prot_L-elsbetiae_contig8847.17871.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8847.17871.1
Unique Nameprot_L-elsbetiae_contig8847.17871.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length190
Homology
BLAST of mRNA_L-elsbetiae_contig8847.17871.1 vs. uniprot
Match: A0A6H5KEG1_9PHAE (SMC hinge domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEG1_9PHAE)

HSP 1 Score: 285 bits (729), Expect = 2.190e-87
Identity = 146/151 (96.69%), Postives = 149/151 (98.68%), Query Frame = 0
Query:   28 STLVSDFVGVQIKVSFVAAGETFLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSSENPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHALPREEALGFVANIMNEEEAVGVELQQPASAVRPK 178
            +TLVSDFVGVQIKVSFVAAGETFLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSS+NPTQFITTTFRPEMVAVASQCYGISHQNKVSNIH LPR+EALGFVANIMNEEEAVGVELQQPASA RPK
Sbjct:  745 TTLVSDFVGVQIKVSFVAAGETFLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSSDNPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHVLPRQEALGFVANIMNEEEAVGVELQQPASAARPK 895          
BLAST of mRNA_L-elsbetiae_contig8847.17871.1 vs. uniprot
Match: D8LEU4_ECTSI (Structural maintenance of chromosomes protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEU4_ECTSI)

HSP 1 Score: 279 bits (713), Expect = 1.170e-83
Identity = 143/148 (96.62%), Postives = 146/148 (98.65%), Query Frame = 0
Query:   28 STLVSDFVGVQIKVSFVAAGETFLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSSENPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHALPREEALGFVANIMNEEEAVGVELQQPASAV 175
            +TLVSDFVGVQIKVSFVAAGETFLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSS+NPTQFITTTFRPEMVAVASQCYGISHQNKVSNIH LPR+EALGFVANIMNEEEAVGVELQQPASA 
Sbjct: 1169 TTLVSDFVGVQIKVSFVAAGETFLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSSDNPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHVLPRQEALGFVANIMNEEEAVGVELQQPASAA 1316          
BLAST of mRNA_L-elsbetiae_contig8847.17871.1 vs. uniprot
Match: A0A7S1D4Y7_CYCTE (Hypothetical protein n=2 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D4Y7_CYCTE)

HSP 1 Score: 208 bits (529), Expect = 1.600e-64
Identity = 101/135 (74.81%), Postives = 123/135 (91.11%), Query Frame = 0
Query:   31 VSDFVGVQIKVSFVAAGETFLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSSENPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHALPREEALGFVANIMNEEEAVG 165
            VS + GV IKV F + GE F+MSQLSGGQKA+VALALIF+IQRCDPAPFYLFDE+DQALDS+YRAAVASL+Q QA+S+ENPTQFI +TFRPE+V+VA++CYGISHQNKVS++H L +++AL F+AN+MNEEEAVG
Sbjct:  100 VSLYRGVGIKVRFSSVGENFMMSQLSGGQKALVALALIFSIQRCDPAPFYLFDELDQALDSTYRAAVASLVQHQANSAENPTQFIVSTFRPELVSVANRCYGISHQNKVSSVHHLSKKDALHFIANLMNEEEAVG 234          
BLAST of mRNA_L-elsbetiae_contig8847.17871.1 vs. uniprot
Match: A0A6V1TI32_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TI32_HETAK)

HSP 1 Score: 201 bits (512), Expect = 4.170e-61
Identity = 101/136 (74.26%), Postives = 118/136 (86.76%), Query Frame = 0
Query:   29 TLVSDFVGVQIKVSFVAAGETFLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSSENPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHALPREEALGFVANIMNEEEAV 164
            T V+ FVGVQI+VSF   GE FLMSQLSGGQKA+VALA+IFAIQRCDPAPFYLFDE+DQALDSSYRA VA+LIQ+QA   +NP QFIT+TFRPE+V+VA + YGISHQNKVSNI+ L +E+AL FV ++MNEEE V
Sbjct:  157 TSVNQFVGVQIRVSFSGDGEQFLMSQLSGGQKALVALAIIFAIQRCDPAPFYLFDELDQALDSSYRAQVAALIQQQARDEDNPAQFITSTFRPELVSVADKTYGISHQNKVSNINPLGKEDALDFVRDLMNEEERV 292          
BLAST of mRNA_L-elsbetiae_contig8847.17871.1 vs. uniprot
Match: A0A7S2ANS6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ANS6_9STRA)

HSP 1 Score: 208 bits (530), Expect = 7.260e-61
Identity = 103/135 (76.30%), Postives = 118/135 (87.41%), Query Frame = 0
Query:   31 VSDFVGVQIKVSFVAAGETFLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSSENPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHALPREEALGFVANIMNEEEAVG 165
            VSDF GVQ+KVSF   GE FLMSQLSGGQKA+VAL+++FAIQRCDPAPFYLFDE+DQALDS+YRAAVA++IQRQA    NPTQFITTTFRPE+V VA++CYGIS QNK SNIH L + EAL FVA++MNEEE VG
Sbjct:  440 VSDFEGVQVKVSFTPGGEVFLMSQLSGGQKAIVALSIVFAIQRCDPAPFYLFDELDQALDSTYRAAVAAMIQRQASHPTNPTQFITTTFRPELVNVAAKCYGISLQNKNSNIHPLSKGEALSFVADLMNEEEGVG 574          
BLAST of mRNA_L-elsbetiae_contig8847.17871.1 vs. uniprot
Match: A0A7S4R7T2_9STRA (Structural maintenance of chromosomes protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R7T2_9STRA)

HSP 1 Score: 213 bits (542), Expect = 1.640e-60
Identity = 109/157 (69.43%), Postives = 132/157 (84.08%), Query Frame = 0
Query:   31 VSDFVGVQIKVSFVAAGETFLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSSENPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHALPREEALGFVANIMNEEEAVGVELQQPASAVRPKPPRGGRRAS 187
            V+ + G+ IKV F   GE +LMSQLSGGQKA+VALALIFAIQRCDPAPFYLFDE+DQALDS+YRAAVA+LIQRQA+S ENPTQF+ +TFRPE+VAVA++CYGISHQNKVSNIH L +++AL F+AN+MNEEEAVG E+   A+    +P  G  R+S
Sbjct: 1128 VNMYRGIGIKVRFSRVGENYLMSQLSGGQKALVALALIFAIQRCDPAPFYLFDELDQALDSTYRAAVAALIQRQANSDENPTQFVCSTFRPELVAVANRCYGISHQNKVSNIHVLSKKDALHFIANLMNEEEAVG-EVTSLATTKASRPESGASRSS 1283          
BLAST of mRNA_L-elsbetiae_contig8847.17871.1 vs. uniprot
Match: A0A7S2A7J6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A7J6_TRICV)

HSP 1 Score: 201 bits (512), Expect = 3.550e-60
Identity = 97/135 (71.85%), Postives = 120/135 (88.89%), Query Frame = 0
Query:   31 VSDFVGVQIKVSFVAAGETFLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSSENPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHALPREEALGFVANIMNEEEAVG 165
            V+ + G+ +KV F    + +LMSQLSGGQKA+VA+ALIFAIQRCDPAPFYLFDE+DQALDSS+RAAVA+LIQRQA S ENPTQF+ +TFRPE+VAV+++CYGISHQNKVSN+H L +++AL F+AN+MNEEEAVG
Sbjct:  238 VNLYRGIGVKVRFTQEEQNYLMSQLSGGQKALVAMALIFAIQRCDPAPFYLFDELDQALDSSHRAAVAALIQRQASSDENPTQFVCSTFRPELVAVSNRCYGISHQNKVSNLHHLSKKDALHFIANLMNEEEAVG 372          
BLAST of mRNA_L-elsbetiae_contig8847.17871.1 vs. uniprot
Match: A0A7S0GJA6_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GJA6_9STRA)

HSP 1 Score: 204 bits (520), Expect = 3.340e-59
Identity = 99/135 (73.33%), Postives = 121/135 (89.63%), Query Frame = 0
Query:   31 VSDFVGVQIKVSFVAAGETFLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSSENPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHALPREEALGFVANIMNEEEAVG 165
            VS + GV++KV F A GE ++MSQLSGGQKA+VA+ LIFAIQRCDPAPFYLFDE+DQALDSS+RA+VA+LIQRQA S ENPTQFI +TFRPE+V VA++CYGISHQNKVS+IH L +++A+ F+AN+MNEEEAVG
Sbjct:  482 VSLYRGVEVKVRFSAVGENYMMSQLSGGQKALVAMGLIFAIQRCDPAPFYLFDELDQALDSSHRASVANLIQRQASSEENPTQFIVSTFRPELVKVANRCYGISHQNKVSSIHHLGKKDAMHFIANLMNEEEAVG 616          
BLAST of mRNA_L-elsbetiae_contig8847.17871.1 vs. uniprot
Match: A0A6A5A6S3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A6S3_9STRA)

HSP 1 Score: 202 bits (515), Expect = 7.200e-59
Identity = 100/131 (76.34%), Postives = 117/131 (89.31%), Query Frame = 0
Query:   34 FVGVQIKVSFVAAGETFLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQAHSSENPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHALPREEALGFVANIMNEEEAV 164
            FVGVQIKV+F   G+++LMSQLSGGQKA+VALA IFAIQRCDPAPFYLFDEIDQALDS++RAAVA+LIQRQAHS ENP QFIT+TFRPE+V VA Q YGISHQNK+SNI  + +EE+L F+A+IM +EEAV
Sbjct:  455 FVGVQIKVNFRGEGDSYLMSQLSGGQKALVALAFIFAIQRCDPAPFYLFDEIDQALDSTHRAAVAALIQRQAHSDENPAQFITSTFRPELVMVADQFYGISHQNKISNIQPMSKEESLAFIADIMADEEAV 585          
BLAST of mRNA_L-elsbetiae_contig8847.17871.1 vs. uniprot
Match: A0A836CH46_9STRA (Structural maintenance of chromosomes protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH46_9STRA)

HSP 1 Score: 208 bits (529), Expect = 9.330e-59
Identity = 112/173 (64.74%), Postives = 126/173 (72.83%), Query Frame = 0
Query:   31 VSDFVGVQIKVSFVAAGETFLMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASLIQRQA---------------------------HSSENPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHALPREEALGFVANIMNEEEAVGVELQQPASAVR 176
            VS + GVQI+VSF   GE  LMSQLSGGQKA+VALALIFAIQRCDPAPFYLFDEIDQALDSSYR A+A+LIQRQA                           HS E PTQFITTTFRPE+V+VA++ YGISHQNKVSNI  + REEALGFVA I++EEEAVG +L QP +  R
Sbjct: 1102 VSQYTGVQIRVSFTGTGEAHLMSQLSGGQKALVALALIFAIQRCDPAPFYLFDEIDQALDSSYRGALAALIQRQASMRSALHARQASAARALLSDITFVHRAHSQETPTQFITTTFRPELVSVAARAYGISHQNKVSNIELMTREEALGFVAEILHEEEAVGTKLAQPTAQRR 1274          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8847.17871.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KEG1_9PHAE2.190e-8796.69SMC hinge domain-containing protein n=1 Tax=Ectoca... [more]
D8LEU4_ECTSI1.170e-8396.62Structural maintenance of chromosomes protein n=1 ... [more]
A0A7S1D4Y7_CYCTE1.600e-6474.81Hypothetical protein n=2 Tax=Cyclophora tenuis Tax... [more]
A0A6V1TI32_HETAK4.170e-6174.26Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2ANS6_9STRA7.260e-6176.30Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S4R7T2_9STRA1.640e-6069.43Structural maintenance of chromosomes protein n=1 ... [more]
A0A7S2A7J6_TRICV3.550e-6071.85Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S0GJA6_9STRA3.340e-5973.33Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A6A5A6S3_9STRA7.200e-5976.34Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A836CH46_9STRA9.330e-5964.74Structural maintenance of chromosomes protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003395RecF/RecN/SMC, N-terminalPFAMPF02463SMC_Ncoord: 49..140
e-value: 3.6E-28
score: 98.5
NoneNo IPR availableGENE3D3.40.50.300coord: 12..165
e-value: 2.7E-37
score: 129.9
NoneNo IPR availablePANTHERPTHR43977:SF1STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3coord: 33..155
NoneNo IPR availablePANTHERPTHR43977FAMILY NOT NAMEDcoord: 33..155
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 37..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8847contigL-elsbetiae_contig8847:1749..4224 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8847.17871.1mRNA_L-elsbetiae_contig8847.17871.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8847 1749..4225 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8847.17871.1 ID=prot_L-elsbetiae_contig8847.17871.1|Name=mRNA_L-elsbetiae_contig8847.17871.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=190bp
GKARGPEGGGEEGGGEDGGVEPNGLSPSTLVSDFVGVQIKVSFVAAGETF
LMSQLSGGQKAVVALALIFAIQRCDPAPFYLFDEIDQALDSSYRAAVASL
IQRQAHSSENPTQFITTTFRPEMVAVASQCYGISHQNKVSNIHALPREEA
LGFVANIMNEEEAVGVELQQPASAVRPKPPRGGRRASSSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003395RecF/RecN/SMC_N
IPR027417P-loop_NTPase