mRNA_L-elsbetiae_contig8776.17810.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8776.17810.1 vs. uniprot
Match: A0A6H5JA15_9PHAE (BEACH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA15_9PHAE) HSP 1 Score: 369 bits (947), Expect = 3.760e-119 Identity = 211/359 (58.77%), Postives = 230/359 (64.07%), Query Frame = 1
Query: 1 VRLGSHLFAFHAESRVLFSGGYWDSTFRVTSLDTGRLVVSIARHRDVVTSLSLADGGVGCRRLVTASRDTTMMVWRVDDNGG-----VSSSSLLHVLYGHDTPVTCVCARASLDAIVSSGEDGTLVVHTLWGGEYVRTITPQ------------------------------------------------RKVQVVG-------------GSSLPPPWPPVEWVGLSTAGIVVAYSPEDAALRSYTINGHAMGATEDARVEAGPLRAFAFSEDGSVLLSGGHDRVVTLRWAHSLA----------------------------------FGCAIRSLALTAGERHLLVGLEDGTLGVLA 777
V LGSHLFA AES +LFSGG+WDS+FR T+LDTGRLVVSIARHRDVVTSLSLADGG G RRLVTASRDTT+MVWRV+D G VS SSLLHVLYGHDTPVTCVCARA LDAIVSSGEDGT+VVHTLWGGEYVRTITPQ R + G GS+LP PW VEWVGLS+AG VVAYSP DA LRSYT+NGH +GA + + EAGPLRAF FSEDG+VLLSGGHDRVVTLRWA+SLA F A+R+LALTAGERHLLVGL+DGTLGVLA
Sbjct: 478 VGLGSHLFAVLAESYLLFSGGHWDSSFRATALDTGRLVVSIARHRDVVTSLSLADGGKGYRRLVTASRDTTLMVWRVEDTAGERAPPVSPSSLLHVLYGHDTPVTCVCARADLDAIVSSGEDGTVVVHTLWGGEYVRTITPQGDASPAEVTALDASGRRLGSLVESAENGGHGDGCSKGVQDNEEEGAASRSSRCPGVDGATATASRAFRGSNLPSPWASVEWVGLSSAGYVVAYSPADATLRSYTVNGHPLGAVQVMKAEAGPLRAFVFSEDGTVLLSGGHDRVVTLRWAYSLALADDGSRKGCGEAVLDGAGPPLAGVPAASAGVPKFASAVRALALTAGERHLLVGLDDGTLGVLA 836
BLAST of mRNA_L-elsbetiae_contig8776.17810.1 vs. uniprot
Match: D8LL16_ECTSI (Similar to neurobeachin like 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL16_ECTSI) HSP 1 Score: 378 bits (971), Expect = 5.880e-117 Identity = 212/357 (59.38%), Postives = 229/357 (64.15%), Query Frame = 1
Query: 1 VRLGSHLFAFHAESRVLFSGGYWDSTFRVTSLDTGRLVVSIARHRDVVTSLSLADGGVGCRRLVTASRDTTMMVWRVDDNGG-----VSSSSLLHVLYGHDTPVTCVCARASLDAIVSSGEDGTLVVHTLWGGEYVRTITPQ-----------------------------------------------------------RKVQVVGGSSLPPPWPPVEWVGLSTAGIVVAYSPEDAALRSYTINGHAMGATEDARVEAGPLRAFAFSEDGSVLLSGGHDRVVTLRWAHSLA----------------------------------FGCAIRSLALTAGERHLLVGLEDGTLGVLA 777
V LGSHLFA AES +LFSGG+WDS+FR T+LDTGRLVVSIARHRDVVTSLSLADGG GCRRLVTASRDTT+MVWRV+D G VS SSLLHVLYGHDTPVTCVCARA LDAIVSSGEDGT+VVHTLWGGEYVRTITPQ +V G +LPPPW VEWVGLS AG VVAYSP DA LRSYT+NGH +GA + + EAGPLRAF FSEDG+VLLSGGHDRVVTLRWA+SLA F A+R+LALTAGERHLLVGLEDGTLGVLA
Sbjct: 4096 VGLGSHLFAILAESYLLFSGGHWDSSFRATALDTGRLVVSIARHRDVVTSLSLADGGKGCRRLVTASRDTTLMVWRVEDTAGERAPPVSPSSLLHVLYGHDTPVTCVCARADLDAIVSSGEDGTVVVHTLWGGEYVRTITPQGDASPTELTALDASGLGSLVESAENGRHGDGCSNRVRDDEEEGTTSRSSRCPGVDGAAATPTKVFRGRNLPPPWASVEWVGLSAAGYVVAYSPADATLRSYTVNGHPLGAVQVTKAEAGPLRAFVFSEDGTVLLSGGHDRVVTLRWAYSLALADDGSRKGCGLAVLDGAGPPLAGVPAASAGVPKFASAVRALALTAGERHLLVGLEDGTLGVLA 4452
BLAST of mRNA_L-elsbetiae_contig8776.17810.1 vs. uniprot
Match: A0A812SB97_SYMMI (Sel-2 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SB97_SYMMI) HSP 1 Score: 176 bits (445), Expect = 1.920e-46 Identity = 109/292 (37.33%), Postives = 155/292 (53.08%), Query Frame = 1
Query: 7 LGSHLFAFHAESRVLFSGGYWDSTFRVTSLDTGRLVVSIARHRDVVTSLSLADGGVGCRRLVTASRDTTMMVWRVDDNGGVSSSSL-LHVLYGHDTPVTCVCARASLDAIVSSGEDGTLVVHTLWGGEYVRTITPQRKVQVVGGSSLPPPWPP--------------------VEWVGLSTAGIVVAYSPEDAALRSYTINGHAMGATEDARVEAGPLRAFAFSEDGSVLLSGGHDRVVTLRWAHSLA-------------------------FGCAIRSLALTAGERHLLV 744
+ +HLFA +SR+LFS G+WD +F+V+S+DTGRL+ SI++HRDVVT + +A G LVT SRD T+++W ++ + LHVLYGHD V CV LD +VS +DGT++VH L G Y+R+IT + G+ + P P V VG+S AG + AYS +D+AL ++TINGH + ++ L AF SED VL++GG ++ +RW HSL F IRS+ LT ERH++V
Sbjct: 784 INTHLFALCPDSRLLFSCGHWDYSFKVSSIDTGRLLQSISQHRDVVTCIDIATD-FGDTWLVTGSRDCTLIIWEINPTADKPITQRPLHVLYGHDDAVNCVDVCVELDVVVSGSDDGTIIVHKLREGIYIRSITVEP---TPSGTVMTSPSEPSMATKSEKSVNRSLLISKRRVHNVGVSVAGFIYAYSNDDSALYTFTINGH----PQARKITGERLHAFRLSEDNRVLITGGERGLIVMRWVHSLELSNVGSKWEFQSVLDGSNAEEYQKPFNSPIRSIYLTQQERHMIV 1067
BLAST of mRNA_L-elsbetiae_contig8776.17810.1 vs. uniprot
Match: LVSC_DICDI (BEACH domain-containing protein lvsC n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=LVSC_DICDI) HSP 1 Score: 163 bits (413), Expect = 4.210e-42 Identity = 95/270 (35.19%), Postives = 149/270 (55.19%), Query Frame = 1
Query: 1 VRLGSHLFAFHAESRVLFSGGYWDSTFRVTSLDTGRLVVSIARHRDVVTSLSLADGGVGCRRLVTASRDTTMMVWRV---DDNGGVSSSSLL-HVLYGHDTPVTCVCARASLDAIVSSGEDGTLVVHTLWGGEYVRTITPQRKVQVVGGSSLPPPWPPVEWVGLSTAGIVVAYSPEDAALRSYTINGHAMGATEDARVEAGPLRAFAFSEDGSVLLSGGHDRVVTLRWA-------HSLAFGCAIRSLALTAGERHLLVGLEDGTLGVLA 777
V + + FA ++ R + S +WD++F+++ +D+ +L+ S+ +H+D VT LSLA G + L+T S+DTT+MVWR+ + +G + + H+LYGHD +TCV LD +S +DGT ++H L GEYVR+I R+ P+ + +S G +V YS D + Y+ING + T D L + S+D L++GG VV +R H L FG I SLA+ + ++HL+VGLEDG L ++A
Sbjct: 2217 VTISPNCFAITSDGRYVISCAHWDNSFKLSFVDSAKLIQSVVKHKDTVTCLSLASDG---QTLITGSKDTTVMVWRIATTNKSGAPKFNDVPDHILYGHDDEITCVDVNVGLDISISGSKDGTCIIHNLKHGEYVRSIYLPRQS-------------PISLIAISNQGYIVIYSQADLMIYLYSINGGLLK-TVDTHER---LHSIIISKDSEYLITGGERGVVVIRTLFNLKPTNHKLVFGTPIHSLAMASDQKHLMVGLEDGRLLIIA 2466
BLAST of mRNA_L-elsbetiae_contig8776.17810.1 vs. uniprot
Match: D3BT75_POLPP (BEACH domain-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BT75_POLPP) HSP 1 Score: 160 bits (405), Expect = 5.040e-41 Identity = 93/268 (34.70%), Postives = 143/268 (53.36%), Query Frame = 1
Query: 1 VRLGSHLFAFHAESRVLFSGGYWDSTFRVTSLDTGRLVVSIARHRDVVTSLSLADGGVGCRRLVTASRDTTMMVWRVDDNGGVS---SSSLLHVLYGHDTPVTCVCARASLDAIVSSGEDGTLVVHTLWGGEYVRTITPQRKVQVVGGSSLPPPWPPVEWVGLSTAGIVVAYSPEDAALRSYTINGHAMGATEDARVEAGPLRAFAFSEDGSVLLSGGHDRVVTLR------WAHSLAFGCAIRSLALTAGERHLLVGLEDGTLGVLA 777
V + + FA + R + S G+WD++F+++ D +L+ S+ +H+D+VT L+ + G + L+T SRDTT+MVW + + + H+LYGHD VTCV LD +S +DGT ++H L GEYVRTI+ ++ PV +S G +V YS D + Y+ING + + + L + S D L+SGG V LR +AH L+F I SLA+ + ++HL+VGLEDG L ++A
Sbjct: 3094 VTISQNCFAVTNDGRYVISCGHWDNSFKLSFTDNAKLIQSVIKHKDIVTCLAWSSDG---QTLITGSRDTTLMVWNLSSHKSAVPKFENVPTHILYGHDDEVTCVDLNIELDICISGSKDGTCIIHNLRRGEYVRTISLPKQS-------------PVSKCSISNQGHIVIYSQADLVIYLYSINGQLLKSVDTHE----RLHSIIISRDSEYLISGGDKGTVVLRTLYNLKFAHKLSFDTPINSLAMGSDQKHLMVGLEDGRLLIIA 3341
BLAST of mRNA_L-elsbetiae_contig8776.17810.1 vs. uniprot
Match: UPI0006451263 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006451263) HSP 1 Score: 160 bits (404), Expect = 6.830e-41 Identity = 93/270 (34.44%), Postives = 147/270 (54.44%), Query Frame = 1
Query: 1 VRLGSHLFAFHAESRVLFSGGYWDSTFRVTSLDTGRLVVSIARHRDVVTSLSLADGGVGCRRLVTASRDTTMMVWRVDDNGGVSSSSLL-----HVLYGHDTPVTCVCARASLDAIVSSGEDGTLVVHTLWGGEYVRTITPQRKVQVVGGSSLPPPWPPVEWVGLSTAGIVVAYSPEDAALRSYTINGHAMGATEDARVEAGPLRAFAFSEDGSVLLSGGHDRVVTLR------WAHSLAFGCAIRSLALTAGERHLLVGLEDGTLGVLA 777
V + FA + R S G+WD++F++ D+ + + S+ +H+D+VT ++ +D G + L+T SRDTT+M+W + + G SS+S H+LYGHD +TCV LD +S +DGT ++H L GEYVR+I ++ V +S G +V YS +D + Y+ING + + E G L + S+D L++GG V +R +A+ L+F AI SLA++ +RHL+VGLEDG L ++A
Sbjct: 2864 VVINQKCFAITNDGRYTISCGHWDNSFKLAHTDSAKPIQSVVKHKDIVTCVAWSDEG---QTLITGSRDTTLMLWNLIAHRGSSSTSRFDNVPTHILYGHDDEITCVDLNVELDICLSGSKDGTCIIHNLGRGEYVRSICLPKQSSV-------------NQCIISNQGHIVIYSQDDLMIYLYSINGQLLSSVET----HGKLNSMIVSKDSEYLITGGDKGTVVIRTLYNLKFAYKLSFDSAIHSLAMSNDQRHLMVGLEDGRLLIIA 3113
BLAST of mRNA_L-elsbetiae_contig8776.17810.1 vs. uniprot
Match: A0A482SUG5_9ARCH (DUF4704 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SUG5_9ARCH) HSP 1 Score: 158 bits (399), Expect = 3.210e-40 Identity = 112/327 (34.25%), Postives = 157/327 (48.01%), Query Frame = 1
Query: 7 LGSHLFAFHAESRVLFSGGYWDSTFRVTSLDTGRLVVSIARHRDVVTSLSLADGGVGCRRLVTASRDTTMMVWRVDDNGGVSSS-SLLHVLYGHDTPVTCVCARASLDAIVSSGEDGTLVVHTLWGGEYVRTI----------------TPQRKVQVVGGSSLPPP--------------------WPP---------VEWVGLSTAGIVVAYSPEDAALRSYTINGHAMGATEDARVEAGPLRAFAFSEDGSVLLSGGHDRVVTLRWAHSLA------------------------FGCAIRSLALTAGERHLLVGLEDGTLGVLA 777
L +HLF + +++FS G+WD+ F+ T+ DTG+LV SI+ HR+VVT +S A L T S+D T+ +W V + LH LYGHD V CV + LD +VS +DGT+++H+L G Y+R+I T R++ + PP + P V + ++ G +VAYS + L SYT+NG + AR L A SEDG +L+GG +V +RW ++LA FGCAIRSLALTA ERHLLVGL+ G L V+A
Sbjct: 3439 LSAHLFCYLPAMKLVFSCGHWDNAFKATAADTGKLVQSISHHREVVTCISCATD-YNKHYLATGSKDCTVTIWEVVERESEPVHIPPLHTLYGHDDAVNCVVIQTELDLVVSGSDDGTIMIHSLREGIYIRSIVLGAMSDSLPASPSFGTLSRRMTIT--QETPPSAGSSPSGTRHLHQHQLQQHHYQPQHLERVVCRVHLLAVTRDGNIVAYSNDGFMLGSYTLNGRCLRLLP-ARER---LHALCLSEDGRTVLTGGERGLVVIRWVYNLAIANNGARRGLEAVCDGSNAPDFEPFGCAIRSLALTANERHLLVGLDSGDLRVVA 3758
BLAST of mRNA_L-elsbetiae_contig8776.17810.1 vs. uniprot
Match: A0A8J4UYA2_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4UYA2_9MYCE) HSP 1 Score: 157 bits (397), Expect = 5.920e-40 Identity = 91/273 (33.33%), Postives = 147/273 (53.85%), Query Frame = 1
Query: 1 VRLGSHLFAFHAESRVLFSGGYWDSTFRVTSLDTGRLVVSIARHRDVVTSLSLADGGVGCRRLVTASRDTTMMVWRVDDNGGVSSSSLL----HVLYGHDTPVTCVCARASLDAIVSSGEDGTLVVHTLWGGEYVRTITPQRKVQVVGGSSLPPPWPPVEWVGLSTAGIVVAYSPEDAALRSYTINGHAMGATEDARVEAGPLRAFAFSEDGSV---LLSGGHDRVVTLRWA-------HSLAFGCAIRSLALTAGERHLLVGLEDGTLGVLA 777
V + + FA + R + S +WD++F+++ +D+ +L+ S+ +H+D VT L++A G + L+T S+DTT+MVW++ +N + H+LYGHD +TCV LD +S +DGT ++H L GEYVR+I R+ PV + ++ G +V YS D + YTING + + + L + S+D + L++GG V +R H L FG I SLA+++ +RHL+VGLEDG L ++A
Sbjct: 3165 VTISPNCFAITNDGRYVISCAHWDNSFKLSFVDSAKLIQSVVKHKDTVTCLAMASDG---QTLITGSKDTTVMVWKIHNNNKSGAPRFADVPDHILYGHDDEITCVDINVELDISISGSKDGTCIIHNLKHGEYVRSIYLPRQS-------------PVSLIAITYQGYIVIYSQADLMIYLYTINGQLLKSIDTHE----RLHSMIVSKDNTYPEYLITGGERGTVVIRTLYNLRPTNHKLMFGTPIHSLAMSSDQRHLMVGLEDGRLLIIA 3417
BLAST of mRNA_L-elsbetiae_contig8776.17810.1 vs. uniprot
Match: F4PIN9_CAVFA (BEACH domain-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PIN9_CAVFA) HSP 1 Score: 156 bits (395), Expect = 1.100e-39 Identity = 91/268 (33.96%), Postives = 144/268 (53.73%), Query Frame = 1
Query: 1 VRLGSHLFAFHAESRVLFSGGYWDSTFRVTSLDTGRLVVSIARHRDVVTSLSLADGGVGCRRLVTASRDTTMMVWRVDDNGGVS---SSSLLHVLYGHDTPVTCVCARASLDAIVSSGEDGTLVVHTLWGGEYVRTITPQRKVQVVGGSSLPPPWPPVEWVGLSTAGIVVAYSPEDAALRSYTINGHAMGATEDARVEAGPLRAFAFSEDGSVLLSGGHDRVVTLR------WAHSLAFGCAIRSLALTAGERHLLVGLEDGTLGVLA 777
V + FA ++ R + S G+WD++F+++ +D+ +L+ S+ +H+D+VT L+ A + L+T SRDTT+MVW + + S H+LYGHD +TCV LD +S +DGT ++H L GEYVR+I ++ PV +S G +V YS D + Y+ING + + E L + ++D L++GG V LR +AH L+F I SLA+ + ++HL+VGLEDG L ++A
Sbjct: 3297 VTISQSCFAVTSDGRYVISCGHWDNSFKLSYVDSAKLIQSVVKHKDIVTCLAWASNS---QTLITGSRDTTLMVWNLQTHKSGSPRFGDVPAHILYGHDDEITCVDVNVELDICLSGSKDGTCIIHNLRHGEYVRSIILPKQA-------------PVTICAISNHGHIVIYSQADFVIYLYSINGQFLQSVETHE----RLNSIIITKDSEYLITGGDKGTVILRTLYNLKFAHKLSFDQPIHSLAMGSDQKHLMVGLEDGRLIIIA 3544
BLAST of mRNA_L-elsbetiae_contig8776.17810.1 vs. uniprot
Match: A0A151Z3T4_9MYCE (BEACH domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z3T4_9MYCE) HSP 1 Score: 149 bits (376), Expect = 3.770e-37 Identity = 88/268 (32.84%), Postives = 141/268 (52.61%), Query Frame = 1
Query: 1 VRLGSHLFAFHAESRVLFSGGYWDSTFRVTSLDTGRLVVSIARHRDVVTSLSLADGGVGCRRLVTASRDTTMMVWRVDD--NGGVSSSSL-LHVLYGHDTPVTCVCARASLDAIVSSGEDGTLVVHTLWGGEYVRTITPQRKVQVVGGSSLPPPWPPVEWVGLSTAGIVVAYSPEDAALRSYTINGHAMGATEDARVEAGPLRAFAFSEDGSVLLSGGHDRVVTLRWA-------HSLAFGCAIRSLALTAGERHLLVGLEDGTLGVL 774
V + + FA + R + S G+WD++F+++ +D+ +L+ S+ +H+D VT L+LA + LVT S+DTT+MVW++ NG + H+LYGHD +TCV LD +S +DGT ++H + GEYVR+I P P+ V +S G +V YS D + Y+ING + + E L + ++D L++GG V +R H L F + SL +++ +RHL+VGL DG L ++
Sbjct: 3073 VTISQNCFAITNDGRYVISCGHWDNSFKLSHVDSAKLIQSVVKHKDSVTCLALASDD---QILVTGSKDTTVMVWKITQHKNGTPRFDDVPSHILYGHDDEITCVDVNVELDISISGSKDGTCIIHNVRHGEYVRSI-------------FLPKQSPISMVSISNQGYIVIYSQSDLMIYLYSINGRLLNSIET----HDRLYSMIITKDSEYLITGGERGNVVIRSLYNLKNTNHKLEFKSPVHSLTMSSDQRHLMVGLSDGRLLII 3320 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8776.17810.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8776.17810.1 >prot_L-elsbetiae_contig8776.17810.1 ID=prot_L-elsbetiae_contig8776.17810.1|Name=mRNA_L-elsbetiae_contig8776.17810.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=259bp VRLGSHLFAFHAESRVLFSGGYWDSTFRVTSLDTGRLVVSIARHRDVVTSback to top mRNA from alignment at L-elsbetiae_contig8776:1439..2485+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8776.17810.1 ID=mRNA_L-elsbetiae_contig8776.17810.1|Name=mRNA_L-elsbetiae_contig8776.17810.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1047bp|location=Sequence derived from alignment at L-elsbetiae_contig8776:1439..2485+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8776:1439..2485+ >mRNA_L-elsbetiae_contig8776.17810.1 ID=mRNA_L-elsbetiae_contig8776.17810.1|Name=mRNA_L-elsbetiae_contig8776.17810.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1554bp|location=Sequence derived from alignment at L-elsbetiae_contig8776:1439..2485+ (Laminarionema elsbetiae ELsaHSoW15)back to top |