mRNA_L-elsbetiae_contig8388.17387.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig8388.17387.1
Unique NamemRNA_L-elsbetiae_contig8388.17387.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig8388.17387.1 vs. uniprot
Match: D7FT03_ECTSI (Mitochondrial import inner membrane translocase subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT03_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 1.620e-36
Identity = 71/82 (86.59%), Postives = 77/82 (93.90%), Query Frame = 1
Query:    1 MDGQGTAEQQQAIIQQLQQQVQAKALQELMTQMTDQCFNRCAKTSGGERLASSEQSCLALCMDRYMDTMGLVNKAMVAKSQR 246
            MDGQ +AEQQQAIIQQLQ+QVQAKALQELMTQMTDQCFNRCAKTS G+R+ SSEQ CLA+CMDRYMDTMGLVNKAMVAK+ R
Sbjct:    1 MDGQASAEQQQAIIQQLQEQVQAKALQELMTQMTDQCFNRCAKTSSGDRINSSEQGCLAMCMDRYMDTMGLVNKAMVAKANR 82          
BLAST of mRNA_L-elsbetiae_contig8388.17387.1 vs. uniprot
Match: A0A835YPH8_9STRA (Mitochondrial import inner membrane translocase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPH8_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 3.200e-16
Identity = 43/77 (55.84%), Postives = 56/77 (72.73%), Query Frame = 1
Query:   16 TAEQQQAIIQQLQQQVQAKALQELMTQMTDQCFNRCAKTSGGERLASSEQSCLALCMDRYMDTMGLVNKAMVAKSQR 246
            T EQ  A I Q + Q +  ++QEL++++T  CF +CAK S G+RL S EQSCLALCMDRY+DTM LVNKA+V +  R
Sbjct:    6 TQEQADAFIAQTRMQAEQASMQELLSKLTSTCFTKCAKPSKGDRLDSGEQSCLALCMDRYVDTMQLVNKAVVDRQDR 82          
BLAST of mRNA_L-elsbetiae_contig8388.17387.1 vs. uniprot
Match: A0A154PK30_DUFNO (Mitochondrial import inner membrane translocase subunit n=3 Tax=Halictidae TaxID=77572 RepID=A0A154PK30_DUFNO)

HSP 1 Score: 68.9 bits (167), Expect = 4.770e-11
Identity = 37/79 (46.84%), Postives = 54/79 (68.35%), Query Frame = 1
Query:   16 TAEQQQAIIQQLQQQVQAKALQELMTQMTDQCFNRCAKTSGGERLASSEQSCLALCMDRYMDTMGLVNKAMVAKSQR*R 252
            T+ Q+  +++Q++QQ+     QEL+T+MT++CF +C    G   L SSEQ C+A+CMDRYMDT  LV+KA   + QR R
Sbjct:   10 TSSQKDELMEQIRQQIAVANAQELLTKMTEKCFKKCINKPG-TTLDSSEQKCVAMCMDRYMDTFNLVSKAYSDRLQRER 87          
BLAST of mRNA_L-elsbetiae_contig8388.17387.1 vs. uniprot
Match: UPI001ED86BCA (mitochondrial import inner membrane translocase subunit Tim13 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED86BCA)

HSP 1 Score: 67.8 bits (164), Expect = 1.160e-10
Identity = 38/82 (46.34%), Postives = 54/82 (65.85%), Query Frame = 1
Query:    7 GQGTAEQQQAIIQQLQQQVQAKALQELMTQMTDQCFNRCAKTSGGERLASSEQSCLALCMDRYMDTMGLVNKAMVAKSQR*R 252
            GQ T  Q+  ++ QL+QQ+     QEL+T+MT++CF +C  T  G  L SSEQ C+A+CMDRYMD+  LV++    + QR R
Sbjct:    5 GQLTGSQKDELMDQLKQQIAVANAQELITKMTEKCFKKCI-TKPGSSLDSSEQKCIAMCMDRYMDSWNLVSRVYGNRIQRER 85          
BLAST of mRNA_L-elsbetiae_contig8388.17387.1 vs. uniprot
Match: A0A653BMJ3_CALMS (Mitochondrial import inner membrane translocase subunit n=2 Tax=Chrysomelidae TaxID=27439 RepID=A0A653BMJ3_CALMS)

HSP 1 Score: 67.4 bits (163), Expect = 1.640e-10
Identity = 36/80 (45.00%), Postives = 53/80 (66.25%), Query Frame = 1
Query:   16 TAEQQQAIIQQLQQQVQAKALQELMTQMTDQCFNRCAKTSGGERLASSEQSCLALCMDRYMDTMGLVNKAMVAKSQR*RG 255
            T  Q+  ++ Q++QQ+     QEL+T+MT++CF +C    G   L SSEQ C+A+CMDRYMD+  L++KA   + QR RG
Sbjct:    8 TGAQRDELMDQVKQQIAVANAQELLTKMTEKCFKKCVNKPGTS-LDSSEQKCVAMCMDRYMDSWNLISKAYGLRIQRERG 86          
BLAST of mRNA_L-elsbetiae_contig8388.17387.1 vs. uniprot
Match: A0A6J1PXN8_9HYME (Mitochondrial import inner membrane translocase subunit n=14 Tax=Formicidae TaxID=36668 RepID=A0A6J1PXN8_9HYME)

HSP 1 Score: 67.4 bits (163), Expect = 1.680e-10
Identity = 37/79 (46.84%), Postives = 52/79 (65.82%), Query Frame = 1
Query:   16 TAEQQQAIIQQLQQQVQAKALQELMTQMTDQCFNRCAKTSGGERLASSEQSCLALCMDRYMDTMGLVNKAMVAKSQR*R 252
            T  Q+  ++QQL+QQ+     QEL+T+MT++CF +C    G   L SSEQ C+A+CMDRYMD+  LV+K    + QR R
Sbjct:   10 TGSQRDELMQQLKQQIAVANAQELLTKMTEKCFKKCIGKPGTS-LDSSEQKCIAMCMDRYMDSFNLVSKTYSERLQRER 87          
BLAST of mRNA_L-elsbetiae_contig8388.17387.1 vs. uniprot
Match: A0A6J0CEK4_NEOLC (Mitochondrial import inner membrane translocase subunit n=3 Tax=Hymenoptera TaxID=7399 RepID=A0A6J0CEK4_NEOLC)

HSP 1 Score: 66.6 bits (161), Expect = 3.320e-10
Identity = 35/72 (48.61%), Postives = 50/72 (69.44%), Query Frame = 1
Query:   37 IIQQLQQQVQAKALQELMTQMTDQCFNRCAKTSGGERLASSEQSCLALCMDRYMDTMGLVNKAMVAKSQR*R 252
            +++Q+QQQ+     QEL+T+MT++CF +C +  G   L SSEQ C+A+CMDRYMD   LV+KA   + QR R
Sbjct:   19 LMEQVQQQIAVANAQELLTKMTEKCFKKCIQKPGTS-LDSSEQKCVAMCMDRYMDAWNLVSKAYSNRLQRER 89          
BLAST of mRNA_L-elsbetiae_contig8388.17387.1 vs. uniprot
Match: A0A2P8XKK0_BLAGE (Mitochondrial import inner membrane translocase subunit n=1 Tax=Blattella germanica TaxID=6973 RepID=A0A2P8XKK0_BLAGE)

HSP 1 Score: 66.2 bits (160), Expect = 3.590e-10
Identity = 34/70 (48.57%), Postives = 49/70 (70.00%), Query Frame = 1
Query:   37 IIQQLQQQVQAKALQELMTQMTDQCFNRCAKTSGGERLASSEQSCLALCMDRYMDTMGLVNKAMVAKSQR 246
            I++Q++QQ+     QEL+T+MT++CF +C    G   L SSEQ C+A+CMDRYMD   LV+KA  ++ QR
Sbjct:    9 IMEQVKQQIAVANAQELLTKMTEKCFKKCINKPGTS-LDSSEQKCIAMCMDRYMDAWNLVSKAYGSRIQR 77          
BLAST of mRNA_L-elsbetiae_contig8388.17387.1 vs. uniprot
Match: A0A6I9WW96_9HYME (Mitochondrial import inner membrane translocase subunit n=7 Tax=Formicidae TaxID=36668 RepID=A0A6I9WW96_9HYME)

HSP 1 Score: 66.2 bits (160), Expect = 4.310e-10
Identity = 36/79 (45.57%), Postives = 52/79 (65.82%), Query Frame = 1
Query:   16 TAEQQQAIIQQLQQQVQAKALQELMTQMTDQCFNRCAKTSGGERLASSEQSCLALCMDRYMDTMGLVNKAMVAKSQR*R 252
            T  Q+  ++QQ++QQ+     QEL+T+MT++CF +C    G   L SSEQ C+A+CMDRYMD+  LV+K    + QR R
Sbjct:   10 TGSQRDELMQQVKQQIAVANAQELLTKMTEKCFKKCIGKPGTS-LDSSEQKCIAMCMDRYMDSFNLVSKTYSERLQRER 87          
BLAST of mRNA_L-elsbetiae_contig8388.17387.1 vs. uniprot
Match: A0A6J2YE62_SITOR (Mitochondrial import inner membrane translocase subunit n=3 Tax=Cucujiformia TaxID=41088 RepID=A0A6J2YE62_SITOR)

HSP 1 Score: 65.9 bits (159), Expect = 5.600e-10
Identity = 36/79 (45.57%), Postives = 53/79 (67.09%), Query Frame = 1
Query:   16 TAEQQQAIIQQLQQQVQAKALQELMTQMTDQCFNRCAKTSGGERLASSEQSCLALCMDRYMDTMGLVNKAMVAKSQR*R 252
            T  Q+  ++ Q++QQ+     QEL+T+MT++CF +C  +  G  L SSEQ C+A+CMDRYMD+  LV+KA   + QR R
Sbjct:    8 TGAQKDELMDQVKQQIAVANAQELLTKMTEKCFKKCI-SKPGTSLDSSEQKCVAMCMDRYMDSWNLVSKAYSMRIQRER 85          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8388.17387.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT03_ECTSI1.620e-3686.59Mitochondrial import inner membrane translocase su... [more]
A0A835YPH8_9STRA3.200e-1655.84Mitochondrial import inner membrane translocase su... [more]
A0A154PK30_DUFNO4.770e-1146.84Mitochondrial import inner membrane translocase su... [more]
UPI001ED86BCA1.160e-1046.34mitochondrial import inner membrane translocase su... [more]
A0A653BMJ3_CALMS1.640e-1045.00Mitochondrial import inner membrane translocase su... [more]
A0A6J1PXN8_9HYME1.680e-1046.84Mitochondrial import inner membrane translocase su... [more]
A0A6J0CEK4_NEOLC3.320e-1048.61Mitochondrial import inner membrane translocase su... [more]
A0A2P8XKK0_BLAGE3.590e-1048.57Mitochondrial import inner membrane translocase su... [more]
A0A6I9WW96_9HYME4.310e-1045.57Mitochondrial import inner membrane translocase su... [more]
A0A6J2YE62_SITOR5.600e-1045.57Mitochondrial import inner membrane translocase su... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8388contigL-elsbetiae_contig8388:1660..5678 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score138.3
Seed ortholog evalue1.7e-30
Seed eggNOG ortholog2880.D7FT03
Preferred nameTIMM13
KEGG koko:K17781
KEGG TC3.A.8.1
Hectar predicted targeting categoryother localisation
GOsGO:0001650,GO:0003008,GO:0003674,GO:0005215,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005744,GO:0005758,GO:0006605,GO:0006626,GO:0006810,GO:0006839,GO:0006886,GO:0006996,GO:0007005,GO:0007006,GO:0007007,GO:0007600,GO:0007605,GO:0008104,GO:0008150,GO:0008270,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016043,GO:0017038,GO:0019866,GO:0022804,GO:0022857,GO:0022884,GO:0031090,GO:0031966,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0031981,GO:0032501,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042719,GO:0042886,GO:0042887,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044452,GO:0044455,GO:0044464,GO:0044743,GO:0045039,GO:0045184,GO:0046872,GO:0046907,GO:0046914,GO:0050877,GO:0050954,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070013,GO:0070585,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0072321,GO:0072594,GO:0072655,GO:0072657,GO:0090150,GO:0090151,GO:0098796,GO:0098798,GO:0098800,GO:1904680,GO:1990351,GO:1990542
EggNOG free text desc.protein import into mitochondrial inner membrane
EggNOG OGsKOG1733@1,KOG1733@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000,ko03029
Ec32 ortholog descriptionMitochondrial protein import TIM8.13 complex subunit, Tim8 homolog
Ec32 orthologEc-24_004310.1
Exons3
Model size1205
Cds size249
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8388.17387.1prot_L-elsbetiae_contig8388.17387.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig8388 2616..5678 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816920.6339388-UTR-L-elsbetiae_contig8388:1659..26151622816920.6339388-UTR-L-elsbetiae_contig8388:1659..2615Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8388 1660..2615 -
1691683913.3619657-UTR-L-elsbetiae_contig8388:1659..26151691683913.3619657-UTR-L-elsbetiae_contig8388:1659..2615Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8388 1660..2615 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816920.6469688-CDS-L-elsbetiae_contig8388:2615..26731622816920.6469688-CDS-L-elsbetiae_contig8388:2615..2673Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8388 2616..2673 -
1691683913.3774362-CDS-L-elsbetiae_contig8388:2615..26731691683913.3774362-CDS-L-elsbetiae_contig8388:2615..2673Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8388 2616..2673 -
1622816920.6668737-CDS-L-elsbetiae_contig8388:3900..40431622816920.6668737-CDS-L-elsbetiae_contig8388:3900..4043Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8388 3901..4043 -
1691683913.3938303-CDS-L-elsbetiae_contig8388:3900..40431691683913.3938303-CDS-L-elsbetiae_contig8388:3900..4043Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8388 3901..4043 -
1622816920.6782515-CDS-L-elsbetiae_contig8388:5630..56781622816920.6782515-CDS-L-elsbetiae_contig8388:5630..5678Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8388 5631..5678 -
1691683913.4057393-CDS-L-elsbetiae_contig8388:5630..56781691683913.4057393-CDS-L-elsbetiae_contig8388:5630..5678Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8388 5631..5678 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig8388.17387.1

>prot_L-elsbetiae_contig8388.17387.1 ID=prot_L-elsbetiae_contig8388.17387.1|Name=mRNA_L-elsbetiae_contig8388.17387.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=83bp
MDGQGTAEQQQAIIQQLQQQVQAKALQELMTQMTDQCFNRCAKTSGGERL
ASSEQSCLALCMDRYMDTMGLVNKAMVAKSQR*
back to top

mRNA from alignment at L-elsbetiae_contig8388:1660..5678-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig8388.17387.1 ID=mRNA_L-elsbetiae_contig8388.17387.1|Name=mRNA_L-elsbetiae_contig8388.17387.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4019bp|location=Sequence derived from alignment at L-elsbetiae_contig8388:1660..5678- (Laminarionema elsbetiae ELsaHSoW15)
ATGGACGGACAGGGAACGGCAGAGCAGCAGCAGGCGATCATCCAGCAGGT AAACAAATGAACACTTAACACTAAATGAAGTGGTGTGTGATTCTCTGTGA ATGTGTCACTCTTGTGGTTCTCCTTCGGCGACCTTTTCTCGCAGGCTGGT CACACCGCCTTCCATCCTCCTTCCATCCACCGGCAAGCAGTGGCATGCCA GGCCCACCCTCTGGATGAACGACCAAAGATTTTAGTCAACCAACGTTGGT CTGGAAGTAGTAGTAGCGTGTTGCATCATACCCTCTCCCCTGGAATATTG TACAGAAGGCTAGATGGCTCTGTCGATAAGACAGAGAACGACCTTTCTGC TTTAGTCATTGTATACATACGTAAGTGACACAAGATACCACCCCCCCCTG AACAGACTTTCGAAGCTCGATTCCTCCCCGGTAAGAAAAGTGCCGGTGCC GAAAGGAGATGGCGCTAGAAACATCTAGTCGAGGGCTGTCCGAACATGTG TCGTTTGGTGCTGGCACTCTCTTCGTTACGGAGTAATGGAGCTCTAAAGT TCGGTCCAGGGGGGGGGTGGTATCGAGTGTACCAACGGTAGGTACCATCT GTAGACTACCGTAGGTGACATAAGATAGACACCTCCTGGACCGAGATTGA AAGCTTGGTGACTCCGCAACGAATACGATTTTAACCACAAACGCCACATT TTCGGACAACTCTCGACGATATCTTTCCTACTACTCTACTTTATTTCACA TATGAACCAATATTCCCCGTTTTTTCTCGCGAAGGCAGTCCGTAGAGACA AACTCTGCGAAGGCTTGTTGTGTACTGAGTCTTGGGAGCCACGGGTAGAC CATTTACTGACTGAAGATCTGCTTGCTGTGGAGTACTTGAGCTTTGAAAA TCGGTCCAGGGGGTGTCTTATCTTATGTCACCTACGGTAGGTAGAACCAG ACACATCAGTGCCTGGGTGAGTGTGCGTGCGGTTTCGCTTTTCTCCCCTC GTACTTTAGAGTGTTGCATGTGTGTGTCAACATGGACATCAGTTGGTTGT TTTTCTCTGCAGGTTTCGGAAACTGCCGGCGACAGAAACACTTCGGAGAT AGGAGCGTATGCAGTCTAAAAAGTAGATAACGGCGGTTGGATGCTCGACA TTTCTCTCTCTCCGCCGATCCCTCGGATCGTCGTTAGCCAATAAAACTGC AAGGCACGCGCACCTCCAATTCCCATCAGGTTTTGGTGAGCGTATACATA GCAATTATGTTTCAAGAGCTGTTTGAATCCTATTTGTACGAATGCCTCAC AAGCGAGCTTTCGTCCCTGAATTAAAGACACACGTACATAGCTCTCGTCC GCTGGAGGACCTTTTGTGTCCTCTGTCCGGAGACAGAACAAAGTCACGAT CAAAGATGCGGAATGACGGTCACGGAAACGGCCGTCACGGGGCTTCCCGG CACTTTATGCTAAAATTTGAAAATTTGTGTGAAGATCTCGTGACCGGCGG ACAGCCACGGGCTCCAACCGTGCGGTCATTCCGCGCCTATCTTTGGTCAC GATTTATACTTACGCTGACAATCTCTGTTTCTGCCCGGGTCCTCTTTTCC GTTGTACGGTAAATACCACCCCACCTCCCCCCCAGTTGCAGCAGCAAGTC CAGGCCAAGGCGCTGCAGGAGCTCATGACCCAGATGACGGACCAGTGCTT CAACCGGTGCGCCAAGACGTCGGGCGGCGAGCGCCTGGCCTCGTCCGAGC AGAGTTGCCTGGCCCTGTGCATGGACAGGTATGTTATCAGACCAGTAGCC TTCGCAGAGTTCGTATTCAGCTGATATAGGAGTACTAGATAACGGAGTAT TGTAAGGAATCGGGAAAGGGGGTCGGGGTTTCAGGGTGGTTAGGGTTGGG GTTAGGGTTACGCAGCCCCTGCCTTTATTTCCGAGATTAAAAGTTAATTT TTTGGCGAAGGTGGTCCCACCAGACAAGCACCACGCGTCGCTTGCGGCGA GCCAGCCGCTTGAGGCTCACGTCGTCGTGCTTTGTGCCCTCGGAGATGTC TGACGCAACGCACGCTGTTGTAGGGTTGGAGGCGCTCGCGCCGCAGTAGA AGCACGGCGACTGCTGTTTGGCTTGGCCGGGGTCGGCGCGGTTGCCGTTA AAGGGACGGTGAGGGGAGGGGGGGCACAGTGTACTTGGGGTACAGGGGCC CAGTGACGAGCACGATTTGATTGTTTTTTTTAACGCACATTTTTTGGGGG ATGCTGAAACTGACAGCACGGGCTCTCCCCAAAGCACCACTTTCCAGTTC GGCCCTTAGCGTCCCGCTGCTCGACCCCTCGACCCACTCCGAGCAACAGT TTGCGTTTCTCTACGATACAGAAAAACGCTGTGCCCATAATTTCTAGTTG TCTTGGAAGGCAAATATTTTGCTCTCCAAAGGTGCAAAAATGGCTTTACT GAAAAGGACTGTCAAACACCCATCTCTCTGACGCTTGGTGCTCACGAAGT CATCGAGCGAGGCCCTCAAATGCAAGAACAGCGCAAGCCGCTGGCAGGGC ATTCTGATATGGTGTGTAAGAGCCATCGCATGCCCCGGGTAGCGGTAGCG GGCAGCTGTGAGTCACTCTTTCGATGTGCTGGTGGACACGACCGATTTTT CCAACAGTCTTTTTTGCGGTGAATCGGGTGAGTATTTGAAACTGCATCCC GGAGGAGCCTAATACCATGATTTTTGCACCTATCAAAAATCGGGCTCGAC GCAATTGTAGCCCGGCTGTTTTCAAAGAGTGTGGGATATTCGAGGGGTCC AGGAGCAAAATTGCACAGAGTTAATAGTTCACACGCGCCAAAGGTAGGTT GAAAAATCCCCGCAAACAAGGCAAAAAGAGCCGACAATCTCGGAACACCT AACCGTCCCCTCAAGGGTCAACGGTATGGCCGGATGACAGTTTTTTGCTT CCTTGCCCCCCCATCCCTCCCCCCCAACCCCACCGTTTATTTTCCCATCC ACCAGGTATATGGACACCATGGGCTTGGTGAACAAAGCGATGGTCGCCAA GTCGCAGCGGTGACGAGGGCTTGTAGCCACGAAGGCTGTTGGGGTAGGTA GAAGAAAGGGGCCCAGCGAGAGTTTGAGTTTCGGCTTGAGAGCATTTTTC TATTGGCTAGAAGGCGTTTTTCCCTCGAATCGCCCGGAATAAAATCTGAG GAGCAGCATCTGGGGACCTGCCCGGCGGGAGTTGCAATTAAAAACGGCGC GCGTGGTACACTTGCGACCTTAGTCGCTGGCCGGTGGCCGTGGACTGTTG TTTTCTCAGGCTTTTCTTCTGTTGTCTCAGCGGTGCATTGCACCGAATTG TGGACCAATATTACGCCACTGTATAGAATGCCGGTTGAACCCTACGGAGT CCCATCTCAAATGTGGGCCTGGTTCGGTTCTTGATTAGCTGATGTTCCTT TCAAAGTGTGGCGCGCTCCATGGTCGACTATATCGATTCCATGCCTTCAT CAGGAGCTATTGTTTCTCGCACTGCACGAGATAAAATTGAATTGATTGGT TTATCGTTCTGTTTTAGCTGCAGGGTGCACGGCGGTGGACTCCAAGACCC CATTGCCTTTTTGAGTAACACTGAGACAAGAAGCCACAAGAGCATTGCCT GGTCGATGCGTTCGCACATACTTCAAGGTAGAGAGCGTGCATCTCACGCC AACTTAACCCCGTAGTAGGTAAATGGTCGTTTTCGCGTTTTGTTTGGGCG ACAGGTAACCTAGGCGCCTTGTTATAGCCTGGAGAGTTCGACCCCGAATT CAGAAACAAGAGAGGAAGGAAGAATCTACTCTCATAGTGTTGTAACGCTT ATTTTGCTGCGGGGGACAGCTCCCTCGTAGCTGCGTTTTGTGGAGATCTA TGAAAAGCCGGTCCTTGCGCTCCAACCCCTCAACACCGACCGCAAACGGC AGCAAACCTACAGGGGGGTGTACCGCAACTGGCTTGGAGTTCTAAATCCA GCGCTAACCTGAAACTGCC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig8388:1660..5678-

>mRNA_L-elsbetiae_contig8388.17387.1 ID=mRNA_L-elsbetiae_contig8388.17387.1|Name=mRNA_L-elsbetiae_contig8388.17387.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=498bp|location=Sequence derived from alignment at L-elsbetiae_contig8388:1660..5678- (Laminarionema elsbetiae ELsaHSoW15)
ATGGACGGACAGGGAACGGCAGAGCAGCAGCAGGCGATCATCCAGCAGAT
GGACGGACAGGGAACGGCAGAGCAGCAGCAGGCGATCATCCAGCAGTTGC
AGCAGCAAGTCCAGGCCAAGGCGCTGCAGGAGCTCATGACCCAGATGACG
GACCAGTGCTTCAACCGGTGCGCCAAGACGTCGGGCGGCGAGCGCCTGGC
CTCGTCCGAGCAGAGTTGCCTGGCCCTGTGCATGGACAGTTGCAGCAGCA
AGTCCAGGCCAAGGCGCTGCAGGAGCTCATGACCCAGATGACGGACCAGT
GCTTCAACCGGTGCGCCAAGACGTCGGGCGGCGAGCGCCTGGCCTCGTCC
GAGCAGAGTTGCCTGGCCCTGTGCATGGACAGGTATATGGACACCATGGG
CTTGGTGAACAAAGCGATGGTCGCCAAGTCGCAGCGGTGAGTATATGGAC
ACCATGGGCTTGGTGAACAAAGCGATGGTCGCCAAGTCGCAGCGGTGA
back to top