mRNA_L-elsbetiae_contig8388.17387.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8388.17387.1 vs. uniprot
Match: D7FT03_ECTSI (Mitochondrial import inner membrane translocase subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT03_ECTSI) HSP 1 Score: 137 bits (345), Expect = 1.620e-36 Identity = 71/82 (86.59%), Postives = 77/82 (93.90%), Query Frame = 1
Query: 1 MDGQGTAEQQQAIIQQLQQQVQAKALQELMTQMTDQCFNRCAKTSGGERLASSEQSCLALCMDRYMDTMGLVNKAMVAKSQR 246
MDGQ +AEQQQAIIQQLQ+QVQAKALQELMTQMTDQCFNRCAKTS G+R+ SSEQ CLA+CMDRYMDTMGLVNKAMVAK+ R
Sbjct: 1 MDGQASAEQQQAIIQQLQEQVQAKALQELMTQMTDQCFNRCAKTSSGDRINSSEQGCLAMCMDRYMDTMGLVNKAMVAKANR 82
BLAST of mRNA_L-elsbetiae_contig8388.17387.1 vs. uniprot
Match: A0A835YPH8_9STRA (Mitochondrial import inner membrane translocase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPH8_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 3.200e-16 Identity = 43/77 (55.84%), Postives = 56/77 (72.73%), Query Frame = 1
Query: 16 TAEQQQAIIQQLQQQVQAKALQELMTQMTDQCFNRCAKTSGGERLASSEQSCLALCMDRYMDTMGLVNKAMVAKSQR 246
T EQ A I Q + Q + ++QEL++++T CF +CAK S G+RL S EQSCLALCMDRY+DTM LVNKA+V + R
Sbjct: 6 TQEQADAFIAQTRMQAEQASMQELLSKLTSTCFTKCAKPSKGDRLDSGEQSCLALCMDRYVDTMQLVNKAVVDRQDR 82
BLAST of mRNA_L-elsbetiae_contig8388.17387.1 vs. uniprot
Match: A0A154PK30_DUFNO (Mitochondrial import inner membrane translocase subunit n=3 Tax=Halictidae TaxID=77572 RepID=A0A154PK30_DUFNO) HSP 1 Score: 68.9 bits (167), Expect = 4.770e-11 Identity = 37/79 (46.84%), Postives = 54/79 (68.35%), Query Frame = 1
Query: 16 TAEQQQAIIQQLQQQVQAKALQELMTQMTDQCFNRCAKTSGGERLASSEQSCLALCMDRYMDTMGLVNKAMVAKSQR*R 252
T+ Q+ +++Q++QQ+ QEL+T+MT++CF +C G L SSEQ C+A+CMDRYMDT LV+KA + QR R
Sbjct: 10 TSSQKDELMEQIRQQIAVANAQELLTKMTEKCFKKCINKPG-TTLDSSEQKCVAMCMDRYMDTFNLVSKAYSDRLQRER 87
BLAST of mRNA_L-elsbetiae_contig8388.17387.1 vs. uniprot
Match: UPI001ED86BCA (mitochondrial import inner membrane translocase subunit Tim13 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED86BCA) HSP 1 Score: 67.8 bits (164), Expect = 1.160e-10 Identity = 38/82 (46.34%), Postives = 54/82 (65.85%), Query Frame = 1
Query: 7 GQGTAEQQQAIIQQLQQQVQAKALQELMTQMTDQCFNRCAKTSGGERLASSEQSCLALCMDRYMDTMGLVNKAMVAKSQR*R 252
GQ T Q+ ++ QL+QQ+ QEL+T+MT++CF +C T G L SSEQ C+A+CMDRYMD+ LV++ + QR R
Sbjct: 5 GQLTGSQKDELMDQLKQQIAVANAQELITKMTEKCFKKCI-TKPGSSLDSSEQKCIAMCMDRYMDSWNLVSRVYGNRIQRER 85
BLAST of mRNA_L-elsbetiae_contig8388.17387.1 vs. uniprot
Match: A0A653BMJ3_CALMS (Mitochondrial import inner membrane translocase subunit n=2 Tax=Chrysomelidae TaxID=27439 RepID=A0A653BMJ3_CALMS) HSP 1 Score: 67.4 bits (163), Expect = 1.640e-10 Identity = 36/80 (45.00%), Postives = 53/80 (66.25%), Query Frame = 1
Query: 16 TAEQQQAIIQQLQQQVQAKALQELMTQMTDQCFNRCAKTSGGERLASSEQSCLALCMDRYMDTMGLVNKAMVAKSQR*RG 255
T Q+ ++ Q++QQ+ QEL+T+MT++CF +C G L SSEQ C+A+CMDRYMD+ L++KA + QR RG
Sbjct: 8 TGAQRDELMDQVKQQIAVANAQELLTKMTEKCFKKCVNKPGTS-LDSSEQKCVAMCMDRYMDSWNLISKAYGLRIQRERG 86
BLAST of mRNA_L-elsbetiae_contig8388.17387.1 vs. uniprot
Match: A0A6J1PXN8_9HYME (Mitochondrial import inner membrane translocase subunit n=14 Tax=Formicidae TaxID=36668 RepID=A0A6J1PXN8_9HYME) HSP 1 Score: 67.4 bits (163), Expect = 1.680e-10 Identity = 37/79 (46.84%), Postives = 52/79 (65.82%), Query Frame = 1
Query: 16 TAEQQQAIIQQLQQQVQAKALQELMTQMTDQCFNRCAKTSGGERLASSEQSCLALCMDRYMDTMGLVNKAMVAKSQR*R 252
T Q+ ++QQL+QQ+ QEL+T+MT++CF +C G L SSEQ C+A+CMDRYMD+ LV+K + QR R
Sbjct: 10 TGSQRDELMQQLKQQIAVANAQELLTKMTEKCFKKCIGKPGTS-LDSSEQKCIAMCMDRYMDSFNLVSKTYSERLQRER 87
BLAST of mRNA_L-elsbetiae_contig8388.17387.1 vs. uniprot
Match: A0A6J0CEK4_NEOLC (Mitochondrial import inner membrane translocase subunit n=3 Tax=Hymenoptera TaxID=7399 RepID=A0A6J0CEK4_NEOLC) HSP 1 Score: 66.6 bits (161), Expect = 3.320e-10 Identity = 35/72 (48.61%), Postives = 50/72 (69.44%), Query Frame = 1
Query: 37 IIQQLQQQVQAKALQELMTQMTDQCFNRCAKTSGGERLASSEQSCLALCMDRYMDTMGLVNKAMVAKSQR*R 252
+++Q+QQQ+ QEL+T+MT++CF +C + G L SSEQ C+A+CMDRYMD LV+KA + QR R
Sbjct: 19 LMEQVQQQIAVANAQELLTKMTEKCFKKCIQKPGTS-LDSSEQKCVAMCMDRYMDAWNLVSKAYSNRLQRER 89
BLAST of mRNA_L-elsbetiae_contig8388.17387.1 vs. uniprot
Match: A0A2P8XKK0_BLAGE (Mitochondrial import inner membrane translocase subunit n=1 Tax=Blattella germanica TaxID=6973 RepID=A0A2P8XKK0_BLAGE) HSP 1 Score: 66.2 bits (160), Expect = 3.590e-10 Identity = 34/70 (48.57%), Postives = 49/70 (70.00%), Query Frame = 1
Query: 37 IIQQLQQQVQAKALQELMTQMTDQCFNRCAKTSGGERLASSEQSCLALCMDRYMDTMGLVNKAMVAKSQR 246
I++Q++QQ+ QEL+T+MT++CF +C G L SSEQ C+A+CMDRYMD LV+KA ++ QR
Sbjct: 9 IMEQVKQQIAVANAQELLTKMTEKCFKKCINKPGTS-LDSSEQKCIAMCMDRYMDAWNLVSKAYGSRIQR 77
BLAST of mRNA_L-elsbetiae_contig8388.17387.1 vs. uniprot
Match: A0A6I9WW96_9HYME (Mitochondrial import inner membrane translocase subunit n=7 Tax=Formicidae TaxID=36668 RepID=A0A6I9WW96_9HYME) HSP 1 Score: 66.2 bits (160), Expect = 4.310e-10 Identity = 36/79 (45.57%), Postives = 52/79 (65.82%), Query Frame = 1
Query: 16 TAEQQQAIIQQLQQQVQAKALQELMTQMTDQCFNRCAKTSGGERLASSEQSCLALCMDRYMDTMGLVNKAMVAKSQR*R 252
T Q+ ++QQ++QQ+ QEL+T+MT++CF +C G L SSEQ C+A+CMDRYMD+ LV+K + QR R
Sbjct: 10 TGSQRDELMQQVKQQIAVANAQELLTKMTEKCFKKCIGKPGTS-LDSSEQKCIAMCMDRYMDSFNLVSKTYSERLQRER 87
BLAST of mRNA_L-elsbetiae_contig8388.17387.1 vs. uniprot
Match: A0A6J2YE62_SITOR (Mitochondrial import inner membrane translocase subunit n=3 Tax=Cucujiformia TaxID=41088 RepID=A0A6J2YE62_SITOR) HSP 1 Score: 65.9 bits (159), Expect = 5.600e-10 Identity = 36/79 (45.57%), Postives = 53/79 (67.09%), Query Frame = 1
Query: 16 TAEQQQAIIQQLQQQVQAKALQELMTQMTDQCFNRCAKTSGGERLASSEQSCLALCMDRYMDTMGLVNKAMVAKSQR*R 252
T Q+ ++ Q++QQ+ QEL+T+MT++CF +C + G L SSEQ C+A+CMDRYMD+ LV+KA + QR R
Sbjct: 8 TGAQKDELMDQVKQQIAVANAQELLTKMTEKCFKKCI-SKPGTSLDSSEQKCVAMCMDRYMDSWNLVSKAYSMRIQRER 85 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8388.17387.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8388.17387.1 >prot_L-elsbetiae_contig8388.17387.1 ID=prot_L-elsbetiae_contig8388.17387.1|Name=mRNA_L-elsbetiae_contig8388.17387.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=83bp MDGQGTAEQQQAIIQQLQQQVQAKALQELMTQMTDQCFNRCAKTSGGERLback to top mRNA from alignment at L-elsbetiae_contig8388:1660..5678- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8388.17387.1 ID=mRNA_L-elsbetiae_contig8388.17387.1|Name=mRNA_L-elsbetiae_contig8388.17387.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4019bp|location=Sequence derived from alignment at L-elsbetiae_contig8388:1660..5678- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8388:1660..5678- >mRNA_L-elsbetiae_contig8388.17387.1 ID=mRNA_L-elsbetiae_contig8388.17387.1|Name=mRNA_L-elsbetiae_contig8388.17387.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=498bp|location=Sequence derived from alignment at L-elsbetiae_contig8388:1660..5678- (Laminarionema elsbetiae ELsaHSoW15)back to top |