mRNA_L-elsbetiae_contig7823.16779.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7823.16779.1 vs. uniprot
Match: A0A6H5K487_9PHAE (SPDS protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K487_9PHAE) HSP 1 Score: 518 bits (1334), Expect = 6.130e-185 Identity = 250/272 (91.91%), Postives = 266/272 (97.79%), Query Frame = 1 Query: 10 VQVKEVLFHERSDFQDVLVFDSVNYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAHGNPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDSMVCEVSKRFDFCTASAFGDKRLTLVHEDAAEFVKREGNNGYDIIIVDSSDPVGPAETLFQPTFYQNMKRALAPLGVIATQGECLWLHLPLITTVLRACAEMFGSVDYAFTTVPSYPSGQIGFVLASVEERDLSTPAATPEAAMTEVLRYYSPEVHKAAFVLPVFAEKEIAGVRRRPVKE 825 ++VKEVLFHERSDFQDVLVFDSV+YGKVLVLDGVIQLTERDECSYQEMLTHIPCFA G+PKKVLIVGGGDGGVLREVARHPGVETIHMCEIDS+VCEVS+RF+FCTASAFGD RL LVHEDAAEFVK+EGN+GYD+IIVDSSDPVGPAETLFQP+FYQNMK+ALAP+GVIATQGECLWLHLPLITTVLRACAE+FGSVDYAFTTVPSYPSGQIGFVLASVEERDLSTPA+TP AAMTEVLRYYSPEVH+AAFVLPVFAEKEIAGVRRR KE Sbjct: 22 LEVKEVLFHERSDFQDVLVFDSVHYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAQGDPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDSVVCEVSRRFEFCTASAFGDARLKLVHEDAAEFVKKEGNSGYDVIIVDSSDPVGPAETLFQPSFYQNMKQALAPMGVIATQGECLWLHLPLITTVLRACAEIFGSVDYAFTTVPSYPSGQIGFVLASVEERDLSTPASTPNAAMTEVLRYYSPEVHRAAFVLPVFAEKEIAGVRRRSSKE 293
BLAST of mRNA_L-elsbetiae_contig7823.16779.1 vs. uniprot
Match: A0A835ZDK7_9STRA (Spermidine/spermine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDK7_9STRA) HSP 1 Score: 418 bits (1075), Expect = 1.600e-145 Identity = 198/268 (73.88%), Postives = 232/268 (86.57%), Query Frame = 1 Query: 10 VQVKEVLFHERSDFQDVLVFDSVNYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAHGNPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDSMVCEVSKRFDFCTASAFGDKRLTLVHEDAAEFVKREGNNGYDIIIVDSSDPVGPAETLFQPTFYQNMKRALAPLGVIATQGECLWLHLPLITTVLRACAEMFGSVDYAFTTVPSYPSGQIGFVLASVEERDLSTPAATPEAAMTEVLRYYSPEVHKAAFVLPVFAEKEIAGVRRR 813 +QV++VLFHE+SDFQDVLVF S YGKVLVLDGVIQ+TERDE +YQEMLTHIPCFAH +PK+VLIVGGGDGG+LREVARH VE I MCEID MVC+VSK+F+F TA+AFGD RL LVHEDAAEFVKREGN YD+IIVDSSDPVGPAETLF+P F+ +MK AL+P G++ATQGECLWLHL LI VL +CA F S++YAFTT+P+YPSGQIGFV+ S ERDLSTPA P+AAM + LRYYSP VH++AFVLP FAE+E++ VR+R Sbjct: 22 LQVEKVLFHEKSDFQDVLVFQSATYGKVLVLDGVIQVTERDEFAYQEMLTHIPCFAHPHPKRVLIVGGGDGGILREVARHACVENIDMCEIDPMVCDVSKKFEFSTATAFGDPRLRLVHEDAAEFVKREGNGQYDVIIVDSSDPVGPAETLFKPEFFLSMKNALSPGGIVATQGECLWLHLKLIRGVLESCASTFTSLEYAFTTMPTYPSGQIGFVVGSTAERDLSTPAREPDAAMAQDLRYYSPAVHRSAFVLPAFAEREVSAVRKR 289
BLAST of mRNA_L-elsbetiae_contig7823.16779.1 vs. uniprot
Match: H3GAD3_PHYRM (PABS domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=H3GAD3_PHYRM) HSP 1 Score: 345 bits (884), Expect = 1.800e-116 Identity = 161/270 (59.63%), Postives = 217/270 (80.37%), Query Frame = 1 Query: 10 VQVKEVLFHERSDFQDVLVFDSVNYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAHGNPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDSMVCEVSKRFDFCT-ASAFGDKRLTLVHEDAAEFVKREGNNGYDIIIVDSSDPVGPAETLFQPTFYQNMKRALAPLGVIATQGECLWLHLPLITTVLRACAEMFGSVDYAFTTVPSYPSGQIGFVLASVEERD--LSTPAATPEAAMTEVLRYYSPEVHKAAFVLPVFAEKEIAGVRR 810 +Q++EVLF +SDFQDVLVF S YG VLVLDGVIQLTERDE +YQEM+TH+P FAH PK+VLIVGGGDGGVLREV +H V+ + MCEID+MVC+VSK+F T A+AF D R+TL+H DAA +++ ++ +D++IVDSSDPVGPAE L++ FY+NMK +L+P GVI TQGECLWLHL LI V++ C +F +V+Y++TT+P+YPSGQIGF++ S+++ + L+ P TP+A M + LRYY+P++H+A+FVLP FAE++I VR+ Sbjct: 22 LQMEEVLFQGKSDFQDVLVFKSATYGNVLVLDGVIQLTERDEFAYQEMITHLPMFAHKQPKRVLIVGGGDGGVLREVTKHDCVQEVVMCEIDAMVCDVSKQFFKDTVATAFDDPRVTLLHADAAVYLRENTSDKFDVVIVDSSDPVGPAEVLYRAEFYENMKNSLSPDGVICTQGECLWLHLDLIVEVMQRCQNLFPTVNYSYTTIPTYPSGQIGFIMCSLDDSEGVLAKPKRTPDAKMEQTLRYYNPKIHEASFVLPSFAERKIVAVRK 291
BLAST of mRNA_L-elsbetiae_contig7823.16779.1 vs. uniprot
Match: A0A3M6VRP9_9STRA (PABS domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VRP9_9STRA) HSP 1 Score: 344 bits (882), Expect = 4.150e-116 Identity = 160/270 (59.26%), Postives = 215/270 (79.63%), Query Frame = 1 Query: 10 VQVKEVLFHERSDFQDVLVFDSVNYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAHGNPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDSMVCEVSKRFDFCT-ASAFGDKRLTLVHEDAAEFVKREGNNGYDIIIVDSSDPVGPAETLFQPTFYQNMKRALAPLGVIATQGECLWLHLPLITTVLRACAEMFGSVDYAFTTVPSYPSGQIGFVLASVEERD--LSTPAATPEAAMTEVLRYYSPEVHKAAFVLPVFAEKEIAGVRR 810 +++++VLF +SDFQDVLVF S YG VLVLDGVIQLTERDE +YQEM+TH+P FAH PK+VLIVGGGDGGVLREV +H V+ + MCEIDSMVC+VSK+F T A+AF D R+TL+H DAA +++ N+ +D++IVDSSDPVGPAE L++ FY+NMK++L+P G+I TQGECLWLHL LI V+ C +F SV+Y++TT+P+YPSGQIGF++ S+++ + L P P+A M + LRYY+P++H+A+FVLP FAE++I VR+ Sbjct: 26 IEIEQVLFKGKSDFQDVLVFKSATYGNVLVLDGVIQLTERDEFAYQEMITHLPMFAHKQPKRVLIVGGGDGGVLREVTKHDCVQEVVMCEIDSMVCDVSKKFFKDTVATAFDDPRVTLLHADAAVYLRENRNDKFDVVIVDSSDPVGPAEVLYRAEFYENMKKSLSPDGIICTQGECLWLHLDLIVDVMTRCQNLFSSVNYSYTTIPTYPSGQIGFIMCSLDDSEGVLIKPKRLPDAKMEQTLRYYNPKIHEASFVLPNFAERKITTVRK 295
BLAST of mRNA_L-elsbetiae_contig7823.16779.1 vs. uniprot
Match: A0A0P1ACQ1_PLAHL (Spermidine synthase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ACQ1_PLAHL) HSP 1 Score: 343 bits (879), Expect = 1.070e-115 Identity = 166/268 (61.94%), Postives = 212/268 (79.10%), Query Frame = 1 Query: 10 VQVKEVLFHERSDFQDVLVFDSVNYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAHGNPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDSMVCEVSKRFDFCT-ASAFGDKRLTLVHEDAAEFVKREGNNGYDIIIVDSSDPVGPAETLFQPTFYQNMKRALAPLGVIATQGECLWLHLPLITTVLRACAEMFGSVDYAFTTVPSYPSGQIGFVLASVEERDLSTPAATPEAAMTEVLRYYSPEVHKAAFVLPVFAEKEIAGVRR 810 +QV++VLF +SDFQDVLVF S YG VLVLDGVIQLTERDE +YQEM+TH+P FAH PK+VLIVGGGDGGVLREV +H VE I MCEIDSMVC+VSK+F T A+AF D R+TL+H DAA ++ N +D++IVDSSDPVGPAE L++ FYQ+MK AL+P GVI TQGECLWLHL LI V++ C +F +V+YA++T+P+YPSGQIGF++ S + + P TP+A M++ LRYYS ++H+A+FVLP FAE++IA VR+ Sbjct: 26 LQVEKVLFQGKSDFQDVLVFKSTTYGNVLVLDGVIQLTERDEFAYQEMITHLPMFAHKQPKRVLIVGGGDGGVLREVIKHDCVEEIIMCEIDSMVCDVSKKFFTETVATAFNDPRVTLLHADAALYLHENTTNKFDVVIVDSSDPVGPAEVLYKAEFYQSMKNALSPDGVICTQGECLWLHLDLIVDVMQRCQSLFSTVNYAYSTIPTYPSGQIGFIMCS-SGQSVDKPKRTPDAKMSKTLRYYSAKIHEASFVLPGFAEQKIATVRK 292
BLAST of mRNA_L-elsbetiae_contig7823.16779.1 vs. uniprot
Match: A0A067CIH9_SAPPC (Spermidine synthase n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CIH9_SAPPC) HSP 1 Score: 340 bits (872), Expect = 1.280e-114 Identity = 169/270 (62.59%), Postives = 205/270 (75.93%), Query Frame = 1 Query: 19 KEVLFHERSDFQDVLVFDSVNYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAHGNPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDSMVCEVSKRFDFCT-ASAFGDKRLTLVHEDAAEFVKREGNNGYDIIIVDSSDPVGPAETLFQPTFYQNMKRALAPLGVIATQGECLWLHLPLITTVLRACAEMFGSVDYAFTTVPSYPSGQIGFVLASVEERD--LSTPAATPEAAMTEVLRYYSPEVHKAAFVLPVFAEKEIAGVRRRPV 819 +EVLFH +SDFQDVLVF S YG VLVLDGVIQ+TERDE SYQEM++H+P ++H NPK VLIVGGGDGGVLREVA+HP VE I MCEID MVC+VSK+F T A+ F D RLTL+H+DAA F++ YD+IIVDSSDPVGPAE LF+ FY+NMK AL P G++ TQGECLWLH+ LI VL F +V YA+TT+P+YPSGQIGFVL S++E L+ P + E LRYY+ ++H+AAFVLP FAEK+IA VR+ V Sbjct: 24 EEVLFHGKSDFQDVLVFKSQTYGNVLVLDGVIQVTERDEFSYQEMISHLPLYSHANPKSVLIVGGGDGGVLREVAKHPSVEKIVMCEIDPMVCDVSKKFFADTLATTFNDPRLTLMHDDAAAFLRNGDCGKYDVIIVDSSDPVGPAEVLFRSEFYENMKNALNPNGIVCTQGECLWLHIDLIADVLGRVGGFFPTVQYAYTTIPTYPSGQIGFVLCSLDESPNALNKPKRIVDEKTAENLRYYNSKIHEAAFVLPSFAEKKIAPVRKTTV 293
BLAST of mRNA_L-elsbetiae_contig7823.16779.1 vs. uniprot
Match: K3WTM8_GLOUD (PABS domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WTM8_GLOUD) HSP 1 Score: 338 bits (868), Expect = 6.370e-114 Identity = 165/270 (61.11%), Postives = 204/270 (75.56%), Query Frame = 1 Query: 10 VQVKEVLFHERSDFQDVLVFDSVNYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAHGNPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDSMVCEVSKRFDFCT-ASAFGDKRLTLVHEDAAEFVKREGNNGYDIIIVDSSDPVGPAETLFQPTFYQNMKRALAPLGVIATQGECLWLHLPLITTVLRACAEMFGSVDYAFTTVPSYPSGQIGFVLASVEERD--LSTPAATPEAAMTEVLRYYSPEVHKAAFVLPVFAEKEIAGVRR 810 ++++EVLF +SDFQDVLVF S YG VLVLDGVIQ TERDE SYQEM+TH+P FAH PK VLIVGGGDGGVLREV +H VE I CEID MVCEVSK+F T A++F D R TL+H DAA +++ +D+IIVDSSDPVGPAE LF+ FY+NMK++LAP G++ TQGECLWLHL LI VL C F ++ YAFTT+P+YPSGQIGF++ S++E L P P A + E LRYY+ +VH+AAFVLP FAE++I+ VR+ Sbjct: 26 LEMEEVLFQGKSDFQDVLVFKSATYGNVLVLDGVIQCTERDEFSYQEMITHLPMFAHAQPKNVLIVGGGDGGVLREVVKHDSVEKIVFCEIDPMVCEVSKKFFKNTLATSFDDPRCTLIHADAAAYLRNNTTEKFDVIIVDSSDPVGPAEVLFRAEFYENMKKSLAPGGIVCTQGECLWLHLDLIVEVLGRCQNYFPTIQYAFTTIPTYPSGQIGFIVCSLDESKDALVKPKRAPTAEVQETLRYYNSKVHEAAFVLPQFAERKISTVRK 295
BLAST of mRNA_L-elsbetiae_contig7823.16779.1 vs. uniprot
Match: A0A6V1NMD1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NMD1_HETAK) HSP 1 Score: 339 bits (870), Expect = 1.030e-113 Identity = 166/271 (61.25%), Postives = 203/271 (74.91%), Query Frame = 1 Query: 10 VQVKEVLFHERSDFQDVLVFDSVNYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAHGNPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDSMVCEVSKR-FDFCTASAFGDKRLTLVHEDAAEFVKREGNNGYDIIIVDSSDPVGPAETLFQPTFYQNMKRALAPLGVIATQGECLWLHLPLITTVLRACAEMFGSVDYAFTTVPSYPSGQIGFVLASVEERD--LSTPAATPEAAMTEVLRYYSPEVHKAAFVLPVFAEKEIAGVRRR 813 +QV+EV+FH++SD+QDVLVF S YG VLVLDGVIQLTERDE +YQEM+TH+P FAH NPKKVLI+GGGDGGVLREV +HP VE I MCEID +V + +K F TA+A+ D RL LV DAAE+++REG+ YD+I+ DSSDPVGPAE+LFQP FY+ M AL P G+ TQGEC WLHL LI V+ ACA +F V+Y +TT+P+YPSGQIGFVL S +D L++P P A M LRYY P VH+AAFVLP FA + R + Sbjct: 43 LQVEEVVFHQKSDYQDVLVFKSSTYGMVLVLDGVIQLTERDEFAYQEMITHLPMFAHPNPKKVLIIGGGDGGVLREVVKHPTVEKIDMCEIDDVVIQCAKDYFGESTATAYADPRLNLVQGDAAEYIRREGHERYDVIVCDSSDPVGPAESLFQPAFYEAMANALEPGGITCTQGECQWLHLELIEKVVAACASLFNQVEYGYTTIPTYPSGQIGFVLCSNNPQDGALTSPRRAPPAGMA--LRYYRPAVHRAAFVLPAFAHAAVQRARAK 311
BLAST of mRNA_L-elsbetiae_contig7823.16779.1 vs. uniprot
Match: M4C138_HYAAE (PABS domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C138_HYAAE) HSP 1 Score: 337 bits (864), Expect = 2.250e-113 Identity = 161/270 (59.63%), Postives = 211/270 (78.15%), Query Frame = 1 Query: 10 VQVKEVLFHERSDFQDVLVFDSVNYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAHGNPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDSMVCEVSKRFDFCT-ASAFGDKRLTLVHEDAAEFVKREGNNGYDIIIVDSSDPVGPAETLFQPTFYQNMKRALAPLGVIATQGECLWLHLPLITTVLRACAEMFGSVDYAFTTVPSYPSGQIGFVLASVEERD--LSTPAATPEAAMTEVLRYYSPEVHKAAFVLPVFAEKEIAGVRR 810 +++ VLF +SDFQDVLVF S YG VLVLDGVIQLTERDE +YQEM+TH+P FAH PK+VLIVGGGDGGVLREV +H V+ I MCEID MVC VSK+F T A+AF D R+TL+H DAA ++K ++ +D++IVDSSDPVGPAE L++ FY++MK+ L+P GVI TQGECLWLHL LI V++ C +F SV+Y++TT+P+YPSGQIGF++ S++E + L P TP+ M + LRYY+ ++H+A+FVLP FAE++IA VR+ Sbjct: 26 LEIDHVLFQGKSDFQDVLVFQSATYGNVLVLDGVIQLTERDEFAYQEMITHLPLFAHKQPKRVLIVGGGDGGVLREVTKHDCVQKIVMCEIDPMVCHVSKKFFKNTVATAFDDPRVTLLHADAAVYLKEHTSDKFDVVIVDSSDPVGPAEVLYRAEFYESMKKCLSPDGVICTQGECLWLHLDLIADVMQRCRALFPSVNYSYTTIPTYPSGQIGFIICSLDESEGVLVKPKRTPDDKMEQTLRYYNAKIHEASFVLPSFAERKIATVRK 295
BLAST of mRNA_L-elsbetiae_contig7823.16779.1 vs. uniprot
Match: F0YCA3_AURAN (PABS domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCA3_AURAN) HSP 1 Score: 337 bits (863), Expect = 3.920e-113 Identity = 170/275 (61.82%), Postives = 209/275 (76.00%), Query Frame = 1 Query: 10 VQVKEVLFHERSDFQDVLVFDSVNYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAHGNPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDSMVCEVSKRFDF-CTASAFGDKRLTLVHEDAAE-------FVKRE---GNNGYDIIIVDSSDPVGPAETLFQPTFYQNMKRALAPLGVIATQGECLWLHLPLITTVLRACAEMFGSVDYAFTTVPSYPSGQIGFVLASVEE--RDLSTPAATPEAAMTEVLRYYSPEVHKAAFVLPVFAEKEI 795 ++V EVL H RS FQD+LVF S YG+VLVLDGVIQLTERDE +YQEM+ H+P F+H PK+VLIVGGGDGGVLREVARH VETI MCEID+ V EVSK+F TA+A+GD RLTLVH DAA +R+ G GYD+IIVDSSDPVGPAETLF+P FY +M+ ALAP G + TQGEC+WLHLPLI+ V+ AC ++F +V+YA+T VP+YPSGQIGF++ S++E L P P + + L+YYSP+VH AAFVLP FAE+E+ Sbjct: 25 LKVGEVLHHSRSAFQDILVFQSETYGRVLVLDGVIQLTERDEFAYQEMIAHLPLFSHPEPKRVLIVGGGDGGVLREVARHACVETIDMCEIDAGVVEVSKKFFAESTATAYGDARLTLVHADAAADPAVAAALARRQTPGGWPGYDVIIVDSSDPVGPAETLFEPAFYDSMRAALAPGGAVCTQGECMWLHLPLISKVVSACRDLFPTVEYAYTCVPTYPSGQIGFIMCSLDESRHALVKPVRAPVGHLQDQLKYYSPDVHAAAFVLPPFAEREL 299 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7823.16779.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7823.16779.1 >prot_L-elsbetiae_contig7823.16779.1 ID=prot_L-elsbetiae_contig7823.16779.1|Name=mRNA_L-elsbetiae_contig7823.16779.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=276bp MSFVQVKEVLFHERSDFQDVLVFDSVNYGKVLVLDGVIQLTERDECSYQEback to top mRNA from alignment at L-elsbetiae_contig7823:5671..8761- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7823.16779.1 ID=mRNA_L-elsbetiae_contig7823.16779.1|Name=mRNA_L-elsbetiae_contig7823.16779.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3091bp|location=Sequence derived from alignment at L-elsbetiae_contig7823:5671..8761- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7823:5671..8761- >mRNA_L-elsbetiae_contig7823.16779.1 ID=mRNA_L-elsbetiae_contig7823.16779.1|Name=mRNA_L-elsbetiae_contig7823.16779.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1656bp|location=Sequence derived from alignment at L-elsbetiae_contig7823:5671..8761- (Laminarionema elsbetiae ELsaHSoW15)back to top |