prot_L-elsbetiae_contig7657.16589.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7657.16589.1
Unique Nameprot_L-elsbetiae_contig7657.16589.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length70
Homology
BLAST of mRNA_L-elsbetiae_contig7657.16589.1 vs. uniprot
Match: D8LG27_ECTSI (Voltage dependent anion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG27_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 1.370e-27
Identity = 51/57 (89.47%), Postives = 57/57 (100.00%), Query Frame = 0
Query:    4 DILSDDYSLKRTLKMKHTTPHGLTVTSKSEHNKGVNGALEAKFFHSKSGVSIDKAKV 60
            DILSDDY+LKRTLKMKHTTPHG+TVT+KSEH+KGVNGALEAKFFH+KSGVSIDKAK+
Sbjct:   63 DILSDDYNLKRTLKMKHTTPHGVTVTAKSEHSKGVNGALEAKFFHAKSGVSIDKAKL 119          
BLAST of mRNA_L-elsbetiae_contig7657.16589.1 vs. uniprot
Match: A0A6H5L9E4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9E4_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 2.780e-18
Identity = 38/43 (88.37%), Postives = 43/43 (100.00%), Query Frame = 0
Query:   18 MKHTTPHGLTVTSKSEHNKGVNGALEAKFFHSKSGVSIDKAKV 60
            MKHTTPHG+TVT+KSEH+KGVNGALEAKFFH+KSGVSIDKAK+
Sbjct:    1 MKHTTPHGVTVTAKSEHSKGVNGALEAKFFHAKSGVSIDKAKL 43          
BLAST of mRNA_L-elsbetiae_contig7657.16589.1 vs. uniprot
Match: A0A835YRG3_9STRA (Voltage dependent anion channel n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRG3_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 2.710e-12
Identity = 31/57 (54.39%), Postives = 42/57 (73.68%), Query Frame = 0
Query:    3 ADILSDDYSLKRTLKMKHTTPHGLTVTSKSEHN--KGVNGALEAKFFHSKSGVSIDK 57
            +D+L+DDYSLK TLK+KHTTPH +  T+++EH    GV G L+ K+ H  SG S+DK
Sbjct:   15 SDLLTDDYSLKNTLKLKHTTPHAVAFTAENEHKGASGVAGKLQLKYAHKPSGFSLDK 71          
BLAST of mRNA_L-elsbetiae_contig7657.16589.1 vs. uniprot
Match: A0A835YZM2_9STRA (Voltage dependent anion channel n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZM2_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 5.100e-10
Identity = 27/58 (46.55%), Postives = 41/58 (70.69%), Query Frame = 0
Query:    4 DILSDDYSLKRTLKMKHTTPHGLTVTSKSEHN-KGVNGALEAKFFHSKSGVSIDKAKV 60
            D+L+DD+SLKRT+K+KHTTPH +  T ++EH    V G ++ K+ H  SG ++DK  +
Sbjct:   16 DLLTDDFSLKRTVKVKHTTPHNVNFTIENEHKGSAVAGKVQLKYAHKPSGFALDKVTI 73          
BLAST of mRNA_L-elsbetiae_contig7657.16589.1 vs. uniprot
Match: W7U0F0_9STRA (Voltage-dependent anion-selective channel n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0F0_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 4.370e-9
Identity = 29/67 (43.28%), Postives = 45/67 (67.16%), Query Frame = 0
Query:    1 PSADILSDDYSLKRTLKMKHTTPHGLTVTSKSEHNKGVNGALE------AKFFHSKSGVSIDKAKVR 61
            P+  IL+DDYSLKRTLK+KH TP G+ VT+++E   G +G  +       K+ H+ +G S+DK +++
Sbjct:   15 PADTILNDDYSLKRTLKVKHVTPDGVAVTTENELT-GKDGKFDLKAKISGKYKHAATGFSVDKLQLK 80          
BLAST of mRNA_L-elsbetiae_contig7657.16589.1 vs. uniprot
Match: W7U446_9STRA (Voltage-dependent anion-selective channel protein 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U446_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 9.070e-7
Identity = 29/61 (47.54%), Postives = 43/61 (70.49%), Query Frame = 0
Query:    2 SADILSDDYSLKRTLKMKHTTPHGLTVTSKSE-HNKGVNGALEAKFFHSKSGVSIDKAKVR 61
            +AD+L+DD++ KR LK+K  TP G+T TS+ E  +KGV   L AK+ H  SG+S+DK + +
Sbjct:   10 TADLLNDDFTYKRKLKIKLPTPDGVTWTSEGELSSKGVMAKLAAKYKHP-SGISLDKLEFK 69          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7657.16589.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LG27_ECTSI1.370e-2789.47Voltage dependent anion channel n=1 Tax=Ectocarpus... [more]
A0A6H5L9E4_9PHAE2.780e-1888.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YRG3_9STRA2.710e-1254.39Voltage dependent anion channel n=1 Tax=Tribonema ... [more]
A0A835YZM2_9STRA5.100e-1046.55Voltage dependent anion channel n=1 Tax=Tribonema ... [more]
W7U0F0_9STRA4.370e-943.28Voltage-dependent anion-selective channel n=2 Tax=... [more]
W7U446_9STRA9.070e-747.54Voltage-dependent anion-selective channel protein ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023614Porin domain superfamilyGENE3D2.40.160.10coord: 1..61
e-value: 2.0E-6
score: 29.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7657contigL-elsbetiae_contig7657:7738..7947 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7657.16589.1mRNA_L-elsbetiae_contig7657.16589.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7657 7738..7947 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7657.16589.1 ID=prot_L-elsbetiae_contig7657.16589.1|Name=mRNA_L-elsbetiae_contig7657.16589.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=70bp
PSADILSDDYSLKRTLKMKHTTPHGLTVTSKSEHNKGVNGALEAKFFHSK
SGVSIDKAKVRVCVCACLF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023614Porin_dom_sf