mRNA_L-elsbetiae_contig7650.16581.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7650.16581.1 vs. uniprot
Match: D7G8J5_ECTSI (HIT-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8J5_ECTSI) HSP 1 Score: 158 bits (399), Expect = 1.590e-47 Identity = 74/81 (91.36%), Postives = 75/81 (92.59%), Query Frame = 1 Query: 1 KERKFKSLHQVLYELTNELCVYPGGATALSIEAPDSKQPPRPFCSVCGYHGLYTCTRCGSRFCSSKCSEQHKETRCLKFAS 243 KERKFKSLHQVLYELTNEL YPGGATA+SIEAP SK PPR FCSVCGYHGLYTCTRCGSRFCSSKC EQHKETRCLKFAS Sbjct: 111 KERKFKSLHQVLYELTNELSAYPGGATAVSIEAPVSKHPPRAFCSVCGYHGLYTCTRCGSRFCSSKCYEQHKETRCLKFAS 191
BLAST of mRNA_L-elsbetiae_contig7650.16581.1 vs. uniprot
Match: W7TJ72_9STRA (Zinc finger, HIT-type n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ72_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 6.960e-20 Identity = 45/76 (59.21%), Postives = 50/76 (65.79%), Query Frame = 1 Query: 16 KSLHQVLYELTNELCVYPGGATALSIEAPDSKQPPRPFCSVCGYHGLYTCTRCGSRFCSSKCSEQHKETRCLKFAS 243 K L Q +YE E G L+ A S P R FCSVCGY GLYTCTRCG R+CSSKC+E HKETRCLKFA+ Sbjct: 116 KPLAQWVYEAGYERS---NGPNYLTAAAQPSSLPTRCFCSVCGYWGLYTCTRCGMRYCSSKCAETHKETRCLKFAT 188
BLAST of mRNA_L-elsbetiae_contig7650.16581.1 vs. uniprot
Match: A0A485KXM9_9STRA (Aste57867_13128 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KXM9_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 7.250e-17 Identity = 41/79 (51.90%), Postives = 48/79 (60.76%), Query Frame = 1 Query: 7 RKFKSLHQVLYELTNELCVYPGGATA--LSIEAPDSKQPPRPFCSVCGYHGLYTCTRCGSRFCSSKCSEQHKETRCLKF 237 RK KSL Q ++E ++ P +T LS S PPR FC VCG YTC RCGSRFCS +C +QHKET CLKF Sbjct: 112 RKVKSLRQWIFEECGDVTNDPLSSTPTYLSAAVKPSTHPPRHFCCVCGLFSSYTCGRCGSRFCSVRCGDQHKETGCLKF 190
BLAST of mRNA_L-elsbetiae_contig7650.16581.1 vs. uniprot
Match: A0A3M7RAX1_BRAPC (Zinc finger HIT domain-containing 1 n=1 Tax=Brachionus plicatilis TaxID=10195 RepID=A0A3M7RAX1_BRAPC) HSP 1 Score: 77.8 bits (190), Expect = 5.570e-16 Identity = 31/52 (59.62%), Postives = 41/52 (78.85%), Query Frame = 1 Query: 88 SIEAPDSKQPPRPFCSVCGYHGLYTCTRCGSRFCSSKCSEQHKETRCLKFAS 243 SI PD+K P R FCSVCG++ YTC +CGSR+CS+KC + HK+TRCLK+ + Sbjct: 140 SISVPDTKFPKRKFCSVCGFYSNYTCVQCGSRYCSTKCLQTHKDTRCLKWTA 191
BLAST of mRNA_L-elsbetiae_contig7650.16581.1 vs. uniprot
Match: A0A8J8NDU2_HALGN (HIT-type domain-containing protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8NDU2_HALGN) HSP 1 Score: 75.1 bits (183), Expect = 7.110e-16 Identity = 32/52 (61.54%), Postives = 39/52 (75.00%), Query Frame = 1 Query: 85 LSIEAPDSKQPPRPFCSVCGYHGLYTCTRCGSRFCSSKCSEQHKETRCLKFA 240 LS+ A SK P R FCSVCGY+ Y CTRCG R+C+ +C E H+ETRC+KFA Sbjct: 46 LSVAARPSKFPVRFFCSVCGYNSKYQCTRCGLRYCTMRCGETHRETRCIKFA 97
BLAST of mRNA_L-elsbetiae_contig7650.16581.1 vs. uniprot
Match: A0A078AGH6_STYLE (HIT-type domain-containing protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078AGH6_STYLE) HSP 1 Score: 77.4 bits (189), Expect = 8.820e-16 Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 1 Query: 16 KSLHQVLYELTNELCVYPGGATALSIEAPDSKQPPRPFCSVCGYHGLYTCTRCGSRFCSSKCSEQHKETRCLKFA 240 K +Q Y++ +L LS+ A SK P R FCSVCGY+ Y CTRCG R+C+ KC E H+ETRC+KFA Sbjct: 126 KIFYQEFYDVEQQL----NFQNYLSVAAKPSKFPRRFFCSVCGYNSKYQCTRCGLRYCTMKCGETHRETRCIKFA 196
BLAST of mRNA_L-elsbetiae_contig7650.16581.1 vs. uniprot
Match: A0A0R3UHX5_MESCO (HIT-type domain-containing protein n=2 Tax=Mesocestoides corti TaxID=53468 RepID=A0A0R3UHX5_MESCO) HSP 1 Score: 76.6 bits (187), Expect = 1.100e-15 Identity = 31/57 (54.39%), Postives = 41/57 (71.93%), Query Frame = 1 Query: 73 GATALSIEAPDSKQPPRPFCSVCGYHGLYTCTRCGSRFCSSKCSEQHKETRCLKFAS 243 GA+ + PDS+ PPR FCSVCG+ GLY C CG+R+CS KC + H +TRCLK+ + Sbjct: 118 GASYFTAAVPDSRFPPRKFCSVCGFPGLYVCVVCGTRYCSIKCRDVHNDTRCLKWVT 174
BLAST of mRNA_L-elsbetiae_contig7650.16581.1 vs. uniprot
Match: A0A0R3WN66_HYDTA (HIT-type domain-containing protein n=3 Tax=Taeniidae TaxID=6208 RepID=A0A0R3WN66_HYDTA) HSP 1 Score: 75.9 bits (185), Expect = 1.290e-15 Identity = 38/81 (46.91%), Postives = 49/81 (60.49%), Query Frame = 1 Query: 10 KFKSLHQVLYELTNELCVYPGG---ATALSIEAPDSKQPPRPFCSVCGYHGLYTCTRCGSRFCSSKCSEQHKETRCLKFAS 243 KFK ++L L E GG A+ + PDS+ PPR FCSVCG+ G Y C CGSR+CS KC + H +TRCLK+ + Sbjct: 72 KFKKTFELL--LDEEYQATKGGQVGASYFTAAVPDSRLPPRKFCSVCGFLGAYVCVVCGSRYCSIKCRDVHNDTRCLKWVA 150
BLAST of mRNA_L-elsbetiae_contig7650.16581.1 vs. uniprot
Match: A0A6G0X8S1_9STRA (HIT-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X8S1_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 2.150e-15 Identity = 36/77 (46.75%), Postives = 50/77 (64.94%), Query Frame = 1 Query: 7 RKFKSLHQVLYELTNELCVYPGGATALSIEAPDSKQPPRPFCSVCGYHGLYTCTRCGSRFCSSKCSEQHKETRCLKF 237 RK KSL Q+++E + + +++ P K+PPR FC+VCG+ Y C RCGS+FCS +C +QHKET CLKF Sbjct: 114 RKVKSLRQLIFEECGDGESSIPNYISAAVKPP--KEPPRHFCAVCGHFSCYNCGRCGSKFCSVQCGDQHKETGCLKF 188
BLAST of mRNA_L-elsbetiae_contig7650.16581.1 vs. uniprot
Match: J9IU22_9SPIT (HIT-type domain-containing protein n=2 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9IU22_9SPIT) HSP 1 Score: 76.6 bits (187), Expect = 2.880e-15 Identity = 33/52 (63.46%), Postives = 39/52 (75.00%), Query Frame = 1 Query: 85 LSIEAPDSKQPPRPFCSVCGYHGLYTCTRCGSRFCSSKCSEQHKETRCLKFA 240 LS+ A SK P R FCSVCGY+ Y CTRCG R+C+ KC E H+ETRC+KFA Sbjct: 173 LSVAAKPSKFPRRFFCSVCGYNSKYQCTRCGLRYCTMKCGETHRETRCIKFA 224 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7650.16581.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7650.16581.1 >prot_L-elsbetiae_contig7650.16581.1 ID=prot_L-elsbetiae_contig7650.16581.1|Name=mRNA_L-elsbetiae_contig7650.16581.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=82bp KERKFKSLHQVLYELTNELCVYPGGATALSIEAPDSKQPPRPFCSVCGYHback to top mRNA from alignment at L-elsbetiae_contig7650:8479..9420- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7650.16581.1 ID=mRNA_L-elsbetiae_contig7650.16581.1|Name=mRNA_L-elsbetiae_contig7650.16581.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=942bp|location=Sequence derived from alignment at L-elsbetiae_contig7650:8479..9420- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7650:8479..9420- >mRNA_L-elsbetiae_contig7650.16581.1 ID=mRNA_L-elsbetiae_contig7650.16581.1|Name=mRNA_L-elsbetiae_contig7650.16581.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=492bp|location=Sequence derived from alignment at L-elsbetiae_contig7650:8479..9420- (Laminarionema elsbetiae ELsaHSoW15)back to top |