mRNA_L-elsbetiae_contig732.16196.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig732.16196.1 vs. uniprot
Match: D8LMS9_ECTSI (EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LMS9_ECTSI) HSP 1 Score: 251 bits (641), Expect = 8.520e-75 Identity = 126/261 (48.28%), Postives = 166/261 (63.60%), Query Frame = 1 Query: 10 TDPEVLAAHGGGMVYPLPHGEIADNGNYLESDEIAVRHGICGDPSSGNEEGFNKFGTASSNWPIFHEFNAGESFKIDIFITAYHYGHYEFFICNTDELPEGADSVPTQECFNQYPLDRDPAHGAFSPIDPNFRGRYYMDPECTASETNHPNDSQYDDDAGWTARMHYLIPDDLTCDHCVLQAVYRTGHRCRHPGYAEFEGPEPFSTSDCAPNREDWINDGGSGVCGEPNTAYAEEFWHCTDLRIVGGAAPGPTPEETPTPD 792 D L A+GGG +PL GE ADNGNYLE++EIA RHG+CGDP +EG N + TA+ NW F +G+ ++DI + AYH+GH EFF+CNTD++ + D VPTQECFN +PL R G SPIDPN+ GRYY+DPEC ET ++S G+ +M Y++PD + C+HC+LQ VY TG+ C+H GY EF P + +S CAPN+ DWI + VCG Y EEFW C+D + + G TP + P PD Sbjct: 69 VDSATLDAYGGGEEFPLYFGEFADNGNYLETNEIAKRHGVCGDPEQNADEGTNVYSTANINWDPLDSFTSGQVLEMDIVMNAYHWGHCEFFVCNTDDMDD-PDGVPTQECFNMHPLTRADDDGDASPIDPNYPGRYYVDPECREEETEQSSNSI----EGYNIKMRYVLPD-IECEHCILQMVYYTGNTCKHIGYEEFN-PTSWPSS-CAPNKWDWI-ELDRYVCGTRGQ-YPEEFWACSDFSMT---SDGSTPADAPMPD 316
BLAST of mRNA_L-elsbetiae_contig732.16196.1 vs. uniprot
Match: D7G4D7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D7_ECTSI) HSP 1 Score: 243 bits (621), Expect = 4.800e-73 Identity = 123/260 (47.31%), Postives = 157/260 (60.38%), Query Frame = 1 Query: 10 TDPEVLAAHGGG---MVYPLPHGEIADNGNYLESDEIAVRHGICGDPSSGNEEGFNKFGTASSNWPIFHEFNAGESFKIDIFITAYHYGHYEFFICNTDELPEGADSVPTQECFNQYPLDRDPAHGAFSPIDPNFRGRYYMDPECTASETNHPNDSQYDDDAGWTARMHYLIPDDLTCDHCVLQAVYRTGHRCRHPGYAEFEGPEPFSTSDCAPNREDWINDGGSGVCGEPNTAYAEEFWHCTDLRIVGGAAPGPTPEET 780 TDP VLA +G G + + GE+A+NGNYLE DEIA RHGICGDP EEG N + T + +WPI + + G+ +I + +TAYH+GH EFFICN DE+ E D + QECFN YPL R SPIDPN+ GRYY+DP+C ET+ D G+ Y +P+ LTCD C+LQ Y TG+ C+H GY EFE P + ++ CAP + DWI + +CGE N +Y EEFW C D I PTP T Sbjct: 37 TDPAVLAEYGDGEWPLRWAYEKGEMAENGNYLEKDEIAKRHGICGDPEQNEEEGANFYSTPNGDWPILNTYQEGQVLEIKLGMTAYHWGHVEFFICNADEM-EDPDGIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDPKCREGETDQTKPEGAQD--GYVIHASYQLPEGLTCDRCILQMNYYTGNSCKHVGYEEFE-PASWPSA-CAPEKHDWI-ELDRYLCGE-NGSYPEEFWACADFAITPDGMANPTPAPT 289
BLAST of mRNA_L-elsbetiae_contig732.16196.1 vs. uniprot
Match: D7FZR0_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR0_ECTSI) HSP 1 Score: 242 bits (617), Expect = 7.200e-72 Identity = 122/258 (47.29%), Postives = 151/258 (58.53%), Query Frame = 1 Query: 1 IRLTDPEVLAAHGGGMVYPLPHGEIADNGNYLESDEIAVRHGICGDPSSGNEEGFNKFGTASSNWPIFHEFNAGESFKIDIFITAYHYGHYEFFICNTDELPEGADSVPTQECFNQYPLDRDPAHGAFSPIDPNFRGRYYMDPECTASETNHPNDSQYDDDAGWTARMHYLIPDDLTCDHCVLQAVYRTGHRCRHPGYAEFEGPEPFSTSDCAPNREDWINDGGSGVCGEPNTAYAEEFWHCTDLRIVGGAAP-GPTP 771 I L DP+VL +HGGG +PL +A NGNYLE +E+AVRHG+CGDP G N + TASSNW + +G+ + I + A+H+GH EFFICN D P+G +PTQECFN+YPL R SPIDPNF GRYY DP C +G +M Y++PD + C HC+LQ VY TG+ C H GY EF P S CAPN+EDW+ D CG+ Y EEFW C+D I A P PTP Sbjct: 64 IELMDPDVLESHGGGSEFPLAFVPLAPNGNYLEPNEVAVRHGVCGDPEQTKPAGSNTYSTASSNWEPLATYRSGQVLEFVIVMNAHHWGHLEFFICNADNDPDG---IPTQECFNEYPLTRAEGDDDNSPIDPNFPGRYYCDPTCRGQTGEVDQTKPLHAISGENMKMRYVLPD-IECSHCILQMVYHTGNTCHHIGYEEFNPPSWPSA--CAPNKEDWV-DTTREACGQGGY-YPEEFWACSDFSITRDATPPSPTP 313
BLAST of mRNA_L-elsbetiae_contig732.16196.1 vs. uniprot
Match: D7FU28_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU28_ECTSI) HSP 1 Score: 249 bits (636), Expect = 1.710e-71 Identity = 124/254 (48.82%), Postives = 161/254 (63.39%), Query Frame = 1 Query: 4 RLTDPEVLAAHGGGMVYPL----PHGEIADNGNYLESDEIAVRHGICGDPSSGNE---EGFNKFGTASSNWPIFHEFNAGESFKIDIFITAYHYGHYEFFICNTDELPEGADSVPTQECFNQYPLDRDPAHGAFSPIDPNFRGRYYMDPECTASETNHPNDSQYDDDAGWTARMHYLIPDDLTCDHCVLQAVYRTGHRCRHPGYAEFEGPEPFSTSDCAPNREDWINDGGSGVCGEPNTAYAEEFWHCTDLRIV 744 RLTDP +LA +G G YPL GE+A NGNY+E I+VRHG+CGDP SG++ +G N + T + +WP+ EF G+S +I + A+HYGH EFFIC+T +L + D V TQECFN+YPL R G SPIDPN+ GRYY DP C +ET D + G+ M+Y +P++L C+HCVLQ Y TGH+C HPGY EF P + S+CAPN+ DWI D CG+ AEEFW C+D+ I Sbjct: 34 RLTDPAILAEYGDGW-YPLRWVYDKGEMAPNGNYIEPQGISVRHGVCGDPKSGDQGGQDGENTYSTPNKDWPVLQEFKQGQSMEIKAVMKAWHYGHLEFFICDTQDLDD-PDDVATQECFNKYPLTRSEGDGVNSPIDPNYPGRYYADPPCRENETE--QDYDWRAGGGYVMTMNYDLPENLVCEHCVLQMWYYTGHKCYHPGYEEFN-PASWG-SECAPNKSDWI-DLSIDYCGDNEWNLAEEFWACSDIAIT 280
BLAST of mRNA_L-elsbetiae_contig732.16196.1 vs. uniprot
Match: D7FRE8_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE8_ECTSI) HSP 1 Score: 254 bits (650), Expect = 2.920e-71 Identity = 133/260 (51.15%), Postives = 164/260 (63.08%), Query Frame = 1 Query: 10 TDPEVLAAHGGGMVYPLPHGEIADNGNYLESDEIAVRHGICGDPSSGNEEGFNKFGTASSNWPIFHEFNAGESFKIDIFITAYHYGHYEFFICNTDELPEGADSVPTQECFNQYPLDRDPAHGAFSPIDPNFRGRYYMDPECTASETNHPNDSQYDDDAGWTARMHYLIPDDLTCDHCVLQAVYRTGHRCRHPGYAEFEGPEPFSTSDCAPNREDWINDGGSGVCGEPNTAYAEEFWHCTDLRIVG-GAAPGPTPEETPT 786 TDP VL +GGG YPL G+ ADNGNYLE+DEIA RHGICGDP +EG N + TA+ W + F +GE ++DI + AYH+GH EFF+CN DE+ + D VPTQECFN+YPL R G SPIDPN+ GRYY+DPEC A ET S G+ +M Y++PD + CD CVLQ H GY EF+ P ST CAPN+ DWI + +CGE AY EEFW C+D+ + G+AP PTP TPT Sbjct: 73 TDPAVLNEYGGGDEYPLYFGDFADNGNYLETDEIAKRHGICGDPEQNADEGSNVYSTANIGWDVLGSFKSGEVLEMDIIMNAYHWGHCEFFLCNADEMDD-PDGVPTQECFNRYPLTRAADDGDASPIDPNYPGRYYVDPECRAGETE--QGSPEGAPKGYNIKMRYVLPD-IECDRCVLQM---------HIGYDEFDPPSWPST--CAPNKSDWI-ELNRYICGEEG-AYPEEFWACSDISLTSDGSAPPPTPYTTPT 315
BLAST of mRNA_L-elsbetiae_contig732.16196.1 vs. uniprot
Match: D7FZQ9_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZQ9_ECTSI) HSP 1 Score: 237 bits (604), Expect = 1.450e-69 Identity = 116/255 (45.49%), Postives = 146/255 (57.25%), Query Frame = 1 Query: 4 RLTDPEVLAAHGGGMVYPLPHGEIADNGNYLESDEIAVRHGICGDPSSGNEEGFNKFGTASSNWPIFHEFNAGESFKIDIFITAYHYGHYEFFICNTDELPEGADSVPTQECFNQYPLDRDPAHGAFSPIDPNFRGRYYMDPECTASETNHPNDSQYDDDAGWTARMHYLIPDDLTCDHCVLQAVYRTGHRCRHPGYAEFEGPEPFSTSDCAPNREDWINDGGSGVCGEPNTAYAEEFWHCTDLRIVGGAAPGPT 768 L DP+VLA HGGG+ +PL A NGNYLE +E+AVRHG+CGDP G N + TASSNW F +G+ + ++ + AYH+GH EFFICN D P G +PTQECFN+YPL R SPIDP+F GRYY DP C E +G +M Y++PD + C HC+LQ VY TG+ C H GY +F+ P DCA +E W+N CG+ Y EEFW C+D I P T Sbjct: 66 ELMDPDVLAKHGGGIDFPLSFVPRAPNGNYLEPNEVAVRHGVCGDPEQNKPSGSNTYSTASSNWEPLTTFQSGQDLEFNVVMNAYHWGHLEFFICNADNDPNG---IPTQECFNEYPLTRAEGDDYNSPIDPDFPGRYYCDPTCRGEEGEVDQTKPVHAISGENMKMRYVLPD-IECSHCILQMVYHTGNTCYHIGYDDFDPPS--WPGDCATTKEQWVNTTVE-ACGQEGY-YPEEFWACSDFSITSDGPPSST 312
BLAST of mRNA_L-elsbetiae_contig732.16196.1 vs. uniprot
Match: D8LD67_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD67_ECTSI) HSP 1 Score: 234 bits (596), Expect = 6.190e-68 Identity = 113/248 (45.56%), Postives = 152/248 (61.29%), Query Frame = 1 Query: 16 PEVLAAHGGGMVYPLPHGEIADNGNYLESDEIAVRHGICGDPSSGNEEGFNKFGTASSNWPIFHEFNAGESFKIDIFITAYHYGHYEFFICNTDELPEGADSVPTQECFNQYPLDRDPAHGAFSPIDPNFRGRYYMDPECTASETNHPNDSQYDDDAGWTARMHYLIPDDLTCDHCVLQAVYRTGHRCRHPGYAEFEGPEPFSTSDCAPNREDWINDGGSGVCGEPNTAYAEEFWHCTDLRIVGGAAP 759 P + A GG +P +GE A NGNY+ESDE+A RHG+CGDP EG NK+G +SN+P+ + G ++ I ++ YH+GH E F+C+ D+LP+G DSV TQ CFN+YPLDR PIDP RGR+ +DP C ASET+ + AG A + +P +TC+ CV+Q Y TG+ C+H GYAEF P S CAP++ DWIN+ G CG+ + AY EEFW+C D+ I P Sbjct: 63 PAAIRARGGDQPWPHFNGERAKNGNYIESDEVAQRHGVCGDPEQTAAEGSNKYGQENSNYPVLETYAEGGILEVKIVVSTYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEYPLDRAEDDEFNGPIDPLNRGRFILDPPCRASETD--QELLPGAFAGDVATARFQLPQGVTCERCVVQMAYYTGNSCKHQGYAEFNPPS--WPSSCAPSKADWINE-AVGQCGDGD-AYPEEFWNCADVSITSDGGP 304
BLAST of mRNA_L-elsbetiae_contig732.16196.1 vs. uniprot
Match: D8LMF4_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMF4_ECTSI) HSP 1 Score: 231 bits (590), Expect = 9.480e-67 Identity = 115/252 (45.63%), Postives = 152/252 (60.32%), Query Frame = 1 Query: 16 PEVLAAHGGGMVYPLPHGEIADNGNYLESDEIAVRHGICGDPSSGNEEGFNKFGTASSNWPIFHEFNAGESFKIDIFITAYHYGHYEFFICNTDELPEGADSVPTQECFNQYPLDRDPAHGAFSPIDPNFRGRYYMDPECTASETNHPNDSQYDDDAGWTARMHYLIPDDLTCDHCVLQAVYRTGHRCRHPGYAEFEGPEPFSTSDCAPNREDWINDGGSGVCGEPNTAYAEEFWHCTDLRIVGGAAPGPTP 771 P + G +P G A NGNYLESDE+A RHGICGDP EG NK+G + N+P+ + G ++ I ++ YH+GH E F+C+T +LPEG DS+ TQ CFN YPLDR PIDP ++GR+ +DP C ASET+ D G A Y +P+ + CD CV+Q VY TG+ C+H GYAEF PE + +S CAP++ DWIN+ G CG+ + AY EEFW+C D+ I PG P Sbjct: 70 PAAIRERSGDKPWPHYQGARAANGNYLESDEVAQRHGICGDPEQTAAEGDNKYGRENYNYPVLGTYAEGGVLEVKILVSTYHWGHVEAFLCDTADLPEGEDSIVTQSCFNDYPLDRAIDDEFNGPIDPEYKGRFILDPPCRASETD--QDLVEGAYPGDVATARYQLPEGVVCDRCVVQMVYYTGNSCKHEGYAEFN-PESWPSS-CAPSKADWINE-VVGQCGDGD-AYPEEFWNCADISITSDGGPGTAP 315
BLAST of mRNA_L-elsbetiae_contig732.16196.1 vs. uniprot
Match: D8LM93_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM93_ECTSI) HSP 1 Score: 224 bits (572), Expect = 3.240e-66 Identity = 118/270 (43.70%), Postives = 156/270 (57.78%), Query Frame = 1 Query: 16 PEVLAAHGGGMVYPLPHGEIADNGNYLESDEIAVRHGICGDPSSGNEEGFNKFGTASSNWPIFHEFNAGESFKIDIFITAYHYGHYEFFICNTDELPEGADSVPTQECFNQYPLDRDPAHGAFSPIDPNFRGRYYMDPECTASETNHPN-DSQYDDDAGWTARMHYLIPDDLTCDHCVLQAVYRTGHRCRHPGYAEFEGPEPFSTSDCAPNREDWINDGGSGVCGEPNTAYAEEFWHCTDLRIVGGAAPGP-----------TPEETPTP 789 P + A GG +P +GE A+NGNY+ES+E+A RHGICGDP E NK+G +SN+P+ + G ++ I ++ YH+GH E F+CN LP G DS TQ CFN++PLDR P DP+ GR+ +DP C ASET+ D Y D TAR + +P L+C+ CV+Q VY TG+ C+H GYAEF P S CAP++ DWIN+ G CG+ + AY EEFW+C D+ I P P PEET P Sbjct: 66 PAAVRARGGDKPWPHFNGERAENGNYIESEEVARRHGICGDPEQTAAESSNKYGQENSNYPVRETYAEGGILEVKIVVSTYHWGHVEMFLCNAANLPGGPDSTVTQSCFNEHPLDRADDDEFNGPADPDNTGRFILDPPCRASETDQALLDGAYPSDVA-TAR--FKLPQGLSCERCVVQMVYYTGNSCKHQGYAEFNPPS--WPSSCAPSKADWINE-VVGQCGDGD-AYPEEFWNCADISITSDGGPAPXXXXXXXXXXTAPEETEPP 328
BLAST of mRNA_L-elsbetiae_contig732.16196.1 vs. uniprot
Match: D8LM92_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM92_ECTSI) HSP 1 Score: 234 bits (596), Expect = 5.470e-66 Identity = 121/262 (46.18%), Postives = 161/262 (61.45%), Query Frame = 1 Query: 16 PEVLAAHGGGMVYPLPHGEIADNGNYLESDEIAVRHGICGDPSSGNEEGFNKFGTASSNWPIFHEFNAGESFKIDIFITAYHYGHYEFFICNTDELPEGADSVPTQECFNQYPLDRDPAHGAFSPIDPNFRGRYYMDPECTASETNHPNDSQYDDDA--GWTARMHYLIPDDLTCDHCVLQAVYRTGHRCRHPGYAEFEGPEPFSTSDCAPNREDWINDGGSGVCGEPNTAYAEEFWHCTDLRIV--GGAAPGPTPEETPTP 789 P + A GG +P +GE A+NGNY+ES+E+A RHGICGDP E NK+G +SN+P+ + G + + ++ YH+GH E F+C+ D+LP G DS TQ CFN++PLDR SPIDP+ GR+ +DP C ASET D + D A G A + +P LTC+ CV+Q VY TG+ C+H GYAEF PE + +S CAP + DWIN+ G CG+ + AY EEFW+C D+ I G AP PT TP P Sbjct: 65 PAAIRARGGDKPWPHFNGERAENGNYIESEEVAQRHGICGDPEQTAAEDSNKYGLENSNYPVLETYAEGGILEFKMVVSTYHWGHVEMFLCDADDLPGGPDSTVTQSCFNEHPLDRVDDDDFNSPIDPSNTGRFILDPPCRASET----DQEMLDGAFPGDVATARFKLPQGLTCERCVVQMVYYTGNSCKHQGYAEFN-PESWPSS-CAPTKADWINE-VVGHCGDGD-AYPEEFWNCADISITSDGDPAPSPTTVLTPAP 318 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig732.16196.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig732.16196.1 >prot_L-elsbetiae_contig732.16196.1 ID=prot_L-elsbetiae_contig732.16196.1|Name=mRNA_L-elsbetiae_contig732.16196.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=440bp IRLTDPEVLAAHGGGMVYPLPHGEIADNGNYLESDEIAVRHGICGDPSSGback to top mRNA from alignment at L-elsbetiae_contig732:27802..30311+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig732.16196.1 ID=mRNA_L-elsbetiae_contig732.16196.1|Name=mRNA_L-elsbetiae_contig732.16196.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2510bp|location=Sequence derived from alignment at L-elsbetiae_contig732:27802..30311+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig732:27802..30311+ >mRNA_L-elsbetiae_contig732.16196.1 ID=mRNA_L-elsbetiae_contig732.16196.1|Name=mRNA_L-elsbetiae_contig732.16196.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2640bp|location=Sequence derived from alignment at L-elsbetiae_contig732:27802..30311+ (Laminarionema elsbetiae ELsaHSoW15)back to top |