mRNA_L-elsbetiae_contig732.16196.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig732.16196.1
Unique NamemRNA_L-elsbetiae_contig732.16196.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig732.16196.1 vs. uniprot
Match: D8LMS9_ECTSI (EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LMS9_ECTSI)

HSP 1 Score: 251 bits (641), Expect = 8.520e-75
Identity = 126/261 (48.28%), Postives = 166/261 (63.60%), Query Frame = 1
Query:   10 TDPEVLAAHGGGMVYPLPHGEIADNGNYLESDEIAVRHGICGDPSSGNEEGFNKFGTASSNWPIFHEFNAGESFKIDIFITAYHYGHYEFFICNTDELPEGADSVPTQECFNQYPLDRDPAHGAFSPIDPNFRGRYYMDPECTASETNHPNDSQYDDDAGWTARMHYLIPDDLTCDHCVLQAVYRTGHRCRHPGYAEFEGPEPFSTSDCAPNREDWINDGGSGVCGEPNTAYAEEFWHCTDLRIVGGAAPGPTPEETPTPD 792
             D   L A+GGG  +PL  GE ADNGNYLE++EIA RHG+CGDP    +EG N + TA+ NW     F +G+  ++DI + AYH+GH EFF+CNTD++ +  D VPTQECFN +PL R    G  SPIDPN+ GRYY+DPEC   ET   ++S      G+  +M Y++PD + C+HC+LQ VY TG+ C+H GY EF  P  + +S CAPN+ DWI +    VCG     Y EEFW C+D  +    + G TP + P PD
Sbjct:   69 VDSATLDAYGGGEEFPLYFGEFADNGNYLETNEIAKRHGVCGDPEQNADEGTNVYSTANINWDPLDSFTSGQVLEMDIVMNAYHWGHCEFFVCNTDDMDD-PDGVPTQECFNMHPLTRADDDGDASPIDPNYPGRYYVDPECREEETEQSSNSI----EGYNIKMRYVLPD-IECEHCILQMVYYTGNTCKHIGYEEFN-PTSWPSS-CAPNKWDWI-ELDRYVCGTRGQ-YPEEFWACSDFSMT---SDGSTPADAPMPD 316          
BLAST of mRNA_L-elsbetiae_contig732.16196.1 vs. uniprot
Match: D7G4D7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D7_ECTSI)

HSP 1 Score: 243 bits (621), Expect = 4.800e-73
Identity = 123/260 (47.31%), Postives = 157/260 (60.38%), Query Frame = 1
Query:   10 TDPEVLAAHGGG---MVYPLPHGEIADNGNYLESDEIAVRHGICGDPSSGNEEGFNKFGTASSNWPIFHEFNAGESFKIDIFITAYHYGHYEFFICNTDELPEGADSVPTQECFNQYPLDRDPAHGAFSPIDPNFRGRYYMDPECTASETNHPNDSQYDDDAGWTARMHYLIPDDLTCDHCVLQAVYRTGHRCRHPGYAEFEGPEPFSTSDCAPNREDWINDGGSGVCGEPNTAYAEEFWHCTDLRIVGGAAPGPTPEET 780
            TDP VLA +G G   + +    GE+A+NGNYLE DEIA RHGICGDP    EEG N + T + +WPI + +  G+  +I + +TAYH+GH EFFICN DE+ E  D +  QECFN YPL R       SPIDPN+ GRYY+DP+C   ET+        D  G+     Y +P+ LTCD C+LQ  Y TG+ C+H GY EFE P  + ++ CAP + DWI +    +CGE N +Y EEFW C D  I       PTP  T
Sbjct:   37 TDPAVLAEYGDGEWPLRWAYEKGEMAENGNYLEKDEIAKRHGICGDPEQNEEEGANFYSTPNGDWPILNTYQEGQVLEIKLGMTAYHWGHVEFFICNADEM-EDPDGIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDPKCREGETDQTKPEGAQD--GYVIHASYQLPEGLTCDRCILQMNYYTGNSCKHVGYEEFE-PASWPSA-CAPEKHDWI-ELDRYLCGE-NGSYPEEFWACADFAITPDGMANPTPAPT 289          
BLAST of mRNA_L-elsbetiae_contig732.16196.1 vs. uniprot
Match: D7FZR0_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR0_ECTSI)

HSP 1 Score: 242 bits (617), Expect = 7.200e-72
Identity = 122/258 (47.29%), Postives = 151/258 (58.53%), Query Frame = 1
Query:    1 IRLTDPEVLAAHGGGMVYPLPHGEIADNGNYLESDEIAVRHGICGDPSSGNEEGFNKFGTASSNWPIFHEFNAGESFKIDIFITAYHYGHYEFFICNTDELPEGADSVPTQECFNQYPLDRDPAHGAFSPIDPNFRGRYYMDPECTASETNHPNDSQYDDDAGWTARMHYLIPDDLTCDHCVLQAVYRTGHRCRHPGYAEFEGPEPFSTSDCAPNREDWINDGGSGVCGEPNTAYAEEFWHCTDLRIVGGAAP-GPTP 771
            I L DP+VL +HGGG  +PL    +A NGNYLE +E+AVRHG+CGDP      G N + TASSNW     + +G+  +  I + A+H+GH EFFICN D  P+G   +PTQECFN+YPL R       SPIDPNF GRYY DP C                +G   +M Y++PD + C HC+LQ VY TG+ C H GY EF  P   S   CAPN+EDW+ D     CG+    Y EEFW C+D  I   A P  PTP
Sbjct:   64 IELMDPDVLESHGGGSEFPLAFVPLAPNGNYLEPNEVAVRHGVCGDPEQTKPAGSNTYSTASSNWEPLATYRSGQVLEFVIVMNAHHWGHLEFFICNADNDPDG---IPTQECFNEYPLTRAEGDDDNSPIDPNFPGRYYCDPTCRGQTGEVDQTKPLHAISGENMKMRYVLPD-IECSHCILQMVYHTGNTCHHIGYEEFNPPSWPSA--CAPNKEDWV-DTTREACGQGGY-YPEEFWACSDFSITRDATPPSPTP 313          
BLAST of mRNA_L-elsbetiae_contig732.16196.1 vs. uniprot
Match: D7FU28_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU28_ECTSI)

HSP 1 Score: 249 bits (636), Expect = 1.710e-71
Identity = 124/254 (48.82%), Postives = 161/254 (63.39%), Query Frame = 1
Query:    4 RLTDPEVLAAHGGGMVYPL----PHGEIADNGNYLESDEIAVRHGICGDPSSGNE---EGFNKFGTASSNWPIFHEFNAGESFKIDIFITAYHYGHYEFFICNTDELPEGADSVPTQECFNQYPLDRDPAHGAFSPIDPNFRGRYYMDPECTASETNHPNDSQYDDDAGWTARMHYLIPDDLTCDHCVLQAVYRTGHRCRHPGYAEFEGPEPFSTSDCAPNREDWINDGGSGVCGEPNTAYAEEFWHCTDLRIV 744
            RLTDP +LA +G G  YPL      GE+A NGNY+E   I+VRHG+CGDP SG++   +G N + T + +WP+  EF  G+S +I   + A+HYGH EFFIC+T +L +  D V TQECFN+YPL R    G  SPIDPN+ GRYY DP C  +ET    D  +    G+   M+Y +P++L C+HCVLQ  Y TGH+C HPGY EF  P  +  S+CAPN+ DWI D     CG+     AEEFW C+D+ I 
Sbjct:   34 RLTDPAILAEYGDGW-YPLRWVYDKGEMAPNGNYIEPQGISVRHGVCGDPKSGDQGGQDGENTYSTPNKDWPVLQEFKQGQSMEIKAVMKAWHYGHLEFFICDTQDLDD-PDDVATQECFNKYPLTRSEGDGVNSPIDPNYPGRYYADPPCRENETE--QDYDWRAGGGYVMTMNYDLPENLVCEHCVLQMWYYTGHKCYHPGYEEFN-PASWG-SECAPNKSDWI-DLSIDYCGDNEWNLAEEFWACSDIAIT 280          
BLAST of mRNA_L-elsbetiae_contig732.16196.1 vs. uniprot
Match: D7FRE8_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE8_ECTSI)

HSP 1 Score: 254 bits (650), Expect = 2.920e-71
Identity = 133/260 (51.15%), Postives = 164/260 (63.08%), Query Frame = 1
Query:   10 TDPEVLAAHGGGMVYPLPHGEIADNGNYLESDEIAVRHGICGDPSSGNEEGFNKFGTASSNWPIFHEFNAGESFKIDIFITAYHYGHYEFFICNTDELPEGADSVPTQECFNQYPLDRDPAHGAFSPIDPNFRGRYYMDPECTASETNHPNDSQYDDDAGWTARMHYLIPDDLTCDHCVLQAVYRTGHRCRHPGYAEFEGPEPFSTSDCAPNREDWINDGGSGVCGEPNTAYAEEFWHCTDLRIVG-GAAPGPTPEETPT 786
            TDP VL  +GGG  YPL  G+ ADNGNYLE+DEIA RHGICGDP    +EG N + TA+  W +   F +GE  ++DI + AYH+GH EFF+CN DE+ +  D VPTQECFN+YPL R    G  SPIDPN+ GRYY+DPEC A ET     S      G+  +M Y++PD + CD CVLQ          H GY EF+ P   ST  CAPN+ DWI +    +CGE   AY EEFW C+D+ +   G+AP PTP  TPT
Sbjct:   73 TDPAVLNEYGGGDEYPLYFGDFADNGNYLETDEIAKRHGICGDPEQNADEGSNVYSTANIGWDVLGSFKSGEVLEMDIIMNAYHWGHCEFFLCNADEMDD-PDGVPTQECFNRYPLTRAADDGDASPIDPNYPGRYYVDPECRAGETE--QGSPEGAPKGYNIKMRYVLPD-IECDRCVLQM---------HIGYDEFDPPSWPST--CAPNKSDWI-ELNRYICGEEG-AYPEEFWACSDISLTSDGSAPPPTPYTTPT 315          
BLAST of mRNA_L-elsbetiae_contig732.16196.1 vs. uniprot
Match: D7FZQ9_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZQ9_ECTSI)

HSP 1 Score: 237 bits (604), Expect = 1.450e-69
Identity = 116/255 (45.49%), Postives = 146/255 (57.25%), Query Frame = 1
Query:    4 RLTDPEVLAAHGGGMVYPLPHGEIADNGNYLESDEIAVRHGICGDPSSGNEEGFNKFGTASSNWPIFHEFNAGESFKIDIFITAYHYGHYEFFICNTDELPEGADSVPTQECFNQYPLDRDPAHGAFSPIDPNFRGRYYMDPECTASETNHPNDSQYDDDAGWTARMHYLIPDDLTCDHCVLQAVYRTGHRCRHPGYAEFEGPEPFSTSDCAPNREDWINDGGSGVCGEPNTAYAEEFWHCTDLRIVGGAAPGPT 768
             L DP+VLA HGGG+ +PL     A NGNYLE +E+AVRHG+CGDP      G N + TASSNW     F +G+  + ++ + AYH+GH EFFICN D  P G   +PTQECFN+YPL R       SPIDP+F GRYY DP C   E            +G   +M Y++PD + C HC+LQ VY TG+ C H GY +F+ P      DCA  +E W+N      CG+    Y EEFW C+D  I     P  T
Sbjct:   66 ELMDPDVLAKHGGGIDFPLSFVPRAPNGNYLEPNEVAVRHGVCGDPEQNKPSGSNTYSTASSNWEPLTTFQSGQDLEFNVVMNAYHWGHLEFFICNADNDPNG---IPTQECFNEYPLTRAEGDDYNSPIDPDFPGRYYCDPTCRGEEGEVDQTKPVHAISGENMKMRYVLPD-IECSHCILQMVYHTGNTCYHIGYDDFDPPS--WPGDCATTKEQWVNTTVE-ACGQEGY-YPEEFWACSDFSITSDGPPSST 312          
BLAST of mRNA_L-elsbetiae_contig732.16196.1 vs. uniprot
Match: D8LD67_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD67_ECTSI)

HSP 1 Score: 234 bits (596), Expect = 6.190e-68
Identity = 113/248 (45.56%), Postives = 152/248 (61.29%), Query Frame = 1
Query:   16 PEVLAAHGGGMVYPLPHGEIADNGNYLESDEIAVRHGICGDPSSGNEEGFNKFGTASSNWPIFHEFNAGESFKIDIFITAYHYGHYEFFICNTDELPEGADSVPTQECFNQYPLDRDPAHGAFSPIDPNFRGRYYMDPECTASETNHPNDSQYDDDAGWTARMHYLIPDDLTCDHCVLQAVYRTGHRCRHPGYAEFEGPEPFSTSDCAPNREDWINDGGSGVCGEPNTAYAEEFWHCTDLRIVGGAAP 759
            P  + A GG   +P  +GE A NGNY+ESDE+A RHG+CGDP     EG NK+G  +SN+P+   +  G   ++ I ++ YH+GH E F+C+ D+LP+G DSV TQ CFN+YPLDR        PIDP  RGR+ +DP C ASET+   +      AG  A   + +P  +TC+ CV+Q  Y TG+ C+H GYAEF  P     S CAP++ DWIN+   G CG+ + AY EEFW+C D+ I     P
Sbjct:   63 PAAIRARGGDQPWPHFNGERAKNGNYIESDEVAQRHGVCGDPEQTAAEGSNKYGQENSNYPVLETYAEGGILEVKIVVSTYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEYPLDRAEDDEFNGPIDPLNRGRFILDPPCRASETD--QELLPGAFAGDVATARFQLPQGVTCERCVVQMAYYTGNSCKHQGYAEFNPPS--WPSSCAPSKADWINE-AVGQCGDGD-AYPEEFWNCADVSITSDGGP 304          
BLAST of mRNA_L-elsbetiae_contig732.16196.1 vs. uniprot
Match: D8LMF4_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMF4_ECTSI)

HSP 1 Score: 231 bits (590), Expect = 9.480e-67
Identity = 115/252 (45.63%), Postives = 152/252 (60.32%), Query Frame = 1
Query:   16 PEVLAAHGGGMVYPLPHGEIADNGNYLESDEIAVRHGICGDPSSGNEEGFNKFGTASSNWPIFHEFNAGESFKIDIFITAYHYGHYEFFICNTDELPEGADSVPTQECFNQYPLDRDPAHGAFSPIDPNFRGRYYMDPECTASETNHPNDSQYDDDAGWTARMHYLIPDDLTCDHCVLQAVYRTGHRCRHPGYAEFEGPEPFSTSDCAPNREDWINDGGSGVCGEPNTAYAEEFWHCTDLRIVGGAAPGPTP 771
            P  +    G   +P   G  A NGNYLESDE+A RHGICGDP     EG NK+G  + N+P+   +  G   ++ I ++ YH+GH E F+C+T +LPEG DS+ TQ CFN YPLDR        PIDP ++GR+ +DP C ASET+   D       G  A   Y +P+ + CD CV+Q VY TG+ C+H GYAEF  PE + +S CAP++ DWIN+   G CG+ + AY EEFW+C D+ I     PG  P
Sbjct:   70 PAAIRERSGDKPWPHYQGARAANGNYLESDEVAQRHGICGDPEQTAAEGDNKYGRENYNYPVLGTYAEGGVLEVKILVSTYHWGHVEAFLCDTADLPEGEDSIVTQSCFNDYPLDRAIDDEFNGPIDPEYKGRFILDPPCRASETD--QDLVEGAYPGDVATARYQLPEGVVCDRCVVQMVYYTGNSCKHEGYAEFN-PESWPSS-CAPSKADWINE-VVGQCGDGD-AYPEEFWNCADISITSDGGPGTAP 315          
BLAST of mRNA_L-elsbetiae_contig732.16196.1 vs. uniprot
Match: D8LM93_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM93_ECTSI)

HSP 1 Score: 224 bits (572), Expect = 3.240e-66
Identity = 118/270 (43.70%), Postives = 156/270 (57.78%), Query Frame = 1
Query:   16 PEVLAAHGGGMVYPLPHGEIADNGNYLESDEIAVRHGICGDPSSGNEEGFNKFGTASSNWPIFHEFNAGESFKIDIFITAYHYGHYEFFICNTDELPEGADSVPTQECFNQYPLDRDPAHGAFSPIDPNFRGRYYMDPECTASETNHPN-DSQYDDDAGWTARMHYLIPDDLTCDHCVLQAVYRTGHRCRHPGYAEFEGPEPFSTSDCAPNREDWINDGGSGVCGEPNTAYAEEFWHCTDLRIVGGAAPGP-----------TPEETPTP 789
            P  + A GG   +P  +GE A+NGNY+ES+E+A RHGICGDP     E  NK+G  +SN+P+   +  G   ++ I ++ YH+GH E F+CN   LP G DS  TQ CFN++PLDR        P DP+  GR+ +DP C ASET+    D  Y  D   TAR  + +P  L+C+ CV+Q VY TG+ C+H GYAEF  P     S CAP++ DWIN+   G CG+ + AY EEFW+C D+ I     P P            PEET  P
Sbjct:   66 PAAVRARGGDKPWPHFNGERAENGNYIESEEVARRHGICGDPEQTAAESSNKYGQENSNYPVRETYAEGGILEVKIVVSTYHWGHVEMFLCNAANLPGGPDSTVTQSCFNEHPLDRADDDEFNGPADPDNTGRFILDPPCRASETDQALLDGAYPSDVA-TAR--FKLPQGLSCERCVVQMVYYTGNSCKHQGYAEFNPPS--WPSSCAPSKADWINE-VVGQCGDGD-AYPEEFWNCADISITSDGGPAPXXXXXXXXXXTAPEETEPP 328          
BLAST of mRNA_L-elsbetiae_contig732.16196.1 vs. uniprot
Match: D8LM92_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM92_ECTSI)

HSP 1 Score: 234 bits (596), Expect = 5.470e-66
Identity = 121/262 (46.18%), Postives = 161/262 (61.45%), Query Frame = 1
Query:   16 PEVLAAHGGGMVYPLPHGEIADNGNYLESDEIAVRHGICGDPSSGNEEGFNKFGTASSNWPIFHEFNAGESFKIDIFITAYHYGHYEFFICNTDELPEGADSVPTQECFNQYPLDRDPAHGAFSPIDPNFRGRYYMDPECTASETNHPNDSQYDDDA--GWTARMHYLIPDDLTCDHCVLQAVYRTGHRCRHPGYAEFEGPEPFSTSDCAPNREDWINDGGSGVCGEPNTAYAEEFWHCTDLRIV--GGAAPGPTPEETPTP 789
            P  + A GG   +P  +GE A+NGNY+ES+E+A RHGICGDP     E  NK+G  +SN+P+   +  G   +  + ++ YH+GH E F+C+ D+LP G DS  TQ CFN++PLDR       SPIDP+  GR+ +DP C ASET    D +  D A  G  A   + +P  LTC+ CV+Q VY TG+ C+H GYAEF  PE + +S CAP + DWIN+   G CG+ + AY EEFW+C D+ I   G  AP PT   TP P
Sbjct:   65 PAAIRARGGDKPWPHFNGERAENGNYIESEEVAQRHGICGDPEQTAAEDSNKYGLENSNYPVLETYAEGGILEFKMVVSTYHWGHVEMFLCDADDLPGGPDSTVTQSCFNEHPLDRVDDDDFNSPIDPSNTGRFILDPPCRASET----DQEMLDGAFPGDVATARFKLPQGLTCERCVVQMVYYTGNSCKHQGYAEFN-PESWPSS-CAPTKADWINE-VVGHCGDGD-AYPEEFWNCADISITSDGDPAPSPTTVLTPAP 318          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig732.16196.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMS9_ECTSI8.520e-7548.28EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LM... [more]
D7G4D7_ECTSI4.800e-7347.31EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FZR0_ECTSI7.200e-7247.29EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FU28_ECTSI1.710e-7148.82EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FRE8_ECTSI2.920e-7151.15EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FZQ9_ECTSI1.450e-6945.49EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LD67_ECTSI6.190e-6845.56EsV-1-166 n=2 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LMF4_ECTSI9.480e-6745.63EsV-1-166 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM... [more]
D8LM93_ECTSI3.240e-6643.70EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LM92_ECTSI5.470e-6646.18EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig732contigL-elsbetiae_contig732:27802..30311 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score248.8
Seed ortholog evalue4.6e-63
Seed eggNOG ortholog2880.D7FU28
KEGG koko:K01315
KEGG Pathwayko04080,ko04610,ko05150,ko05164,map04080,map04610,map05150,map05164
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
EC3.4.21.7
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko04147,ko04516
Exons6
Model size1322
Cds size1320
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig732.16196.1prot_L-elsbetiae_contig732.16196.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig732 27802..30311 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816815.8077931-CDS-L-elsbetiae_contig732:27801..279481622816815.8077931-CDS-L-elsbetiae_contig732:27801..27948Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig732 27802..27948 +
1691683835.0107934-CDS-L-elsbetiae_contig732:27801..279481691683835.0107934-CDS-L-elsbetiae_contig732:27801..27948Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig732 27802..27948 +
1622816815.8211641-CDS-L-elsbetiae_contig732:28306..284231622816815.8211641-CDS-L-elsbetiae_contig732:28306..28423Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig732 28307..28423 +
1691683835.0252273-CDS-L-elsbetiae_contig732:28306..284231691683835.0252273-CDS-L-elsbetiae_contig732:28306..28423Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig732 28307..28423 +
1622816815.8325553-CDS-L-elsbetiae_contig732:28589..288871622816815.8325553-CDS-L-elsbetiae_contig732:28589..28887Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig732 28590..28887 +
1691683835.0349474-CDS-L-elsbetiae_contig732:28589..288871691683835.0349474-CDS-L-elsbetiae_contig732:28589..28887Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig732 28590..28887 +
1622816815.8462026-CDS-L-elsbetiae_contig732:29137..293031622816815.8462026-CDS-L-elsbetiae_contig732:29137..29303Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig732 29138..29303 +
1691683835.0447338-CDS-L-elsbetiae_contig732:29137..293031691683835.0447338-CDS-L-elsbetiae_contig732:29137..29303Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig732 29138..29303 +
1622816815.8561513-CDS-L-elsbetiae_contig732:29573..295931622816815.8561513-CDS-L-elsbetiae_contig732:29573..29593Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig732 29574..29593 +
1691683835.0553339-CDS-L-elsbetiae_contig732:29573..295931691683835.0553339-CDS-L-elsbetiae_contig732:29573..29593Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig732 29574..29593 +
1622816815.8656645-CDS-L-elsbetiae_contig732:29739..303111622816815.8656645-CDS-L-elsbetiae_contig732:29739..30311Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig732 29740..30311 +
1691683835.0639496-CDS-L-elsbetiae_contig732:29739..303111691683835.0639496-CDS-L-elsbetiae_contig732:29739..30311Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig732 29740..30311 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig732.16196.1

>prot_L-elsbetiae_contig732.16196.1 ID=prot_L-elsbetiae_contig732.16196.1|Name=mRNA_L-elsbetiae_contig732.16196.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=440bp
IRLTDPEVLAAHGGGMVYPLPHGEIADNGNYLESDEIAVRHGICGDPSSG
NEEGFNKFGTASSNWPIFHEFNAGESFKIDIFITAYHYGHYEFFICNTDE
LPEGADSVPTQECFNQYPLDRDPAHGAFSPIDPNFRGRYYMDPECTASET
NHPNDSQYDDDAGWTARMHYLIPDDLTCDHCVLQAVYRTGHRCRHPGYAE
FEGPEPFSTSDCAPNREDWINDGGSGVCGEPNTAYAEEFWHCTDLRIVGG
AAPGPTPEETPTPDEGNPEETPAPESETPSPFSPESEPETPIPEETPAPE
SETPSPIFPESESENSSPEETPAPESETPSPFSPESEPETPTPEEIPAPE
SETPSPISPESESENSSPEETPAPESETPTPEETPTPDEGTPEPQPETPS
PVSPEETPVEDTEEQNSLLCSDGTTGIESPNGACCVFECG
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mRNA from alignment at L-elsbetiae_contig732:27802..30311+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig732.16196.1 ID=mRNA_L-elsbetiae_contig732.16196.1|Name=mRNA_L-elsbetiae_contig732.16196.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2510bp|location=Sequence derived from alignment at L-elsbetiae_contig732:27802..30311+ (Laminarionema elsbetiae ELsaHSoW15)
ATAAGACTAACTGACCCAGAGGTCCTGGCAGCCCACGGCGGCGGCATGGT TTATCCTCTGCCTCACGGCGAGATCGCCGACAACGGCAACTACCTGGAGT CAGATGAGATCGCCGTACGCCACGGCATCTGCGGCGATCCATCGAGCGTG AGTGTGTGTGTGTGTGTGTTGCTTGTGTTTGACAAAAGGGGTGTGAAACG CCCTGCCTTTCCGGCCTATATCTCTAGCGTGCAACTGAAAATAATTGAGA GGGAAGGGTGTGCGTCGATTATGTGAGAGGGTGGTGCGTCCTTCTCTGCG TTGCGAGGGTTGGAGGATACATATGGAGCGCGAGGGCGACCTCTCTGGTG CCTGAATCGCAACGGCTAAACACTAACTACATTAGCGGCTGTACCAGGCA GTAGCACATGCAATACTTCGATGCCAACAAATGATTGACTTCAATTCAAT ACTTTTCTTAATACTAACCCCCCAACTTCTCTCTGCGAACGTGGGCGCGG CGCAGGGCAACGAGGAGGGTTTCAACAAGTTTGGTACCGCTTCCAGCAAC TGGCCCATCTTCCACGAGTTCAATGCCGGAGAATCGTTCAAAATCGACAT CTTCATAACGGCCTATCACTATGTGAGAGACGGGTGTGGGTGTAGGACCG GGAGACTACCGCAGTATCTACACGTCCGTATAAAATAATACGGACTTCGG AGACAGATAGCGTGGCCTCGCTCCATGATGGCGTGTAGTCGACCTAAACA CATACCTCTTCTCCTTGAACACACACACACGTACGCAGGGTCACTACGAG TTTTTCATATGCAACACAGACGAGCTACCGGAGGGAGCGGACTCGGTGCC CACCCAGGAGTGCTTCAACCAATACCCCCTGGACCGTGACCCGGCCCATG GTGCGTTCAGCCCGATCGATCCCAACTTCCGGGGCCGGTACTACATGGAC CCGGAGTGTACAGCGTCTGAGACTAACCACCCGAACGACAGTCAGTACGA TGACGACGCCGGGTGGACCGCGAGGATGCATTACTTGATTCCCGATGATC TGACATGCGATCATTGTGTTCTCCAGGCTGTTTACCGTGAGTGCGGGCGG TCGGGTGGGTGGGTGGGTTGGCGGGCGGTAACGTTGTGCTTCAGTATCGG GATGTAAGGTGCCATCGTGATTATAGACGGTGACATCGTGCTGCGCACAA ACACAACTTGGAAGGTGCCATGATGGCATCTTTGGGCTGCATGTTTACGT GTAGTGAGATTATACGCGAACGTTTGTACGTGTAGTGAGATTTTACGAGA ACTAATGTGTCGTTATTTTTTCAACCTCTCTTCCAGGCACCGGCCACCGG TGCAGGCACCCCGGATACGCTGAATTCGAGGGGCCTGAGCCCTTTTCCAC CAGCGACTGCGCCCCCAACAGGGAGGATTGGATCAACGACGGGGGCAGCG GAGTATGCGGGGAACCCAACACCGCCTACGCTGAGGAGTTCTGGCACTGC ACGTGAGCTTCGCCCCCAGGGCGTGCGTTTTCCTCGCGTGTCGAAATACC GCCGTGTTTTTCCGCCAGAATATTCTTCATCGGCCCGCTTACCCGACAGG CGCTACACCAAGAACAACAATGCATATGATAGCGCGTGCTTCAACAGCCA GGCGTTTGGAAGAAAAGCCTGTCATTGGTAGGCGCCCGTTCTAACCCCGC TTCTCCCCCCTCCCCCCTCTCTCCTATTCTCCTTGCTGTCCTGCTCTCAA CCTGGATGCTTTGGACTCGCAGCGACTTGAGAATTGTTGGAGGTAAGCCT CTTTCTCCTTGTTTGCTTTGACCTTAGCAAAGAAAAAGTGTGCTTCTGTA TAGGTCACCTCATGTCAACCACGATCGTCTACAGTTAACGTCATCCACTT TGCTCTGTACGTGCGACATCACACACTGTTCCTCCCAGGCGCGGCTCCGG GGCCAACCCCCGAGGAGACCCCCACGCCGGACGAGGGGAACCCCGAGGAG ACCCCCGCCCCTGAATCTGAAACACCCAGCCCTTTTTCTCCCGAATCCGA ACCTGAGACGCCTATCCCCGAGGAGACCCCCGCACCCGAATCTGAAACAC CCAGCCCTATTTTCCCCGAGTCCGAATCTGAGAATTCCAGCCCCGAGGAG ACCCCCGCCCCTGAATCTGAGACGCCTAGCCCTTTTTCTCCCGAGTCCGA ACCTGAGACGCCTACCCCCGAGGAGATCCCCGCACCCGAATCTGAAACAC CCAGCCCTATTTCCCCCGAGTCCGAATCTGAGAATTCCAGCCCCGAGGAG ACCCCCGCACCCGAATCTGAGACGCCTACCCCCGAGGAGACCCCCACGCC AGACGAGGGGACTCCCGAACCCCAACCTGAGACGCCCAGTCCTGTTTCTC CCGAGGAGACCCCTGTGGAGGACACCGAGGAGCAGAACTCGCTGTTGTGC AGCGACGGCACCACCGGCATCGAGTCTCCTAACGGCGCTTGCTGTGTGTT TGAGTGTGGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig732:27802..30311+

>mRNA_L-elsbetiae_contig732.16196.1 ID=mRNA_L-elsbetiae_contig732.16196.1|Name=mRNA_L-elsbetiae_contig732.16196.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2640bp|location=Sequence derived from alignment at L-elsbetiae_contig732:27802..30311+ (Laminarionema elsbetiae ELsaHSoW15)
ATAAGACTAACTGACCCAGAGGTCCTGGCAGCCCACGGCGGCGGCATGGT
TTATCCTCTGCCTCACGGCGAGATCGCCGACAACGGCAACTACCTGGAGT
CAGATGAGATCGCCGTACGCCACGGCATCTGCGGCGATCCATCGAGCATA
AGACTAACTGACCCAGAGGTCCTGGCAGCCCACGGCGGCGGCATGGTTTA
TCCTCTGCCTCACGGCGAGATCGCCGACAACGGCAACTACCTGGAGTCAG
ATGAGATCGCCGTACGCCACGGCATCTGCGGCGATCCATCGAGCGGCAAC
GAGGAGGGTTTCAACAAGTTTGGTACCGCTTCCAGCAACTGGCCCATCTT
CCACGAGTTCAATGCCGGAGAATCGTTCAAAATCGACATCTTCATAACGG
CCTATCACTATGGCAACGAGGAGGGTTTCAACAAGTTTGGTACCGCTTCC
AGCAACTGGCCCATCTTCCACGAGTTCAATGCCGGAGAATCGTTCAAAAT
CGACATCTTCATAACGGCCTATCACTATGGTCACTACGAGTTTTTCATAT
GCAACACAGACGAGCTACCGGAGGGAGCGGACTCGGTGCCCACCCAGGAG
TGCTTCAACCAATACCCCCTGGACCGTGACCCGGCCCATGGTGCGTTCAG
CCCGATCGATCCCAACTTCCGGGGCCGGTACTACATGGACCCGGAGTGTA
CAGCGTCTGAGACTAACCACCCGAACGACAGTCAGTACGATGACGACGCC
GGGTGGACCGCGAGGATGCATTACTTGATTCCCGATGATCTGACATGCGA
TCATTGTGTTCTCCAGGCTGTTTACCGGTCACTACGAGTTTTTCATATGC
AACACAGACGAGCTACCGGAGGGAGCGGACTCGGTGCCCACCCAGGAGTG
CTTCAACCAATACCCCCTGGACCGTGACCCGGCCCATGGTGCGTTCAGCC
CGATCGATCCCAACTTCCGGGGCCGGTACTACATGGACCCGGAGTGTACA
GCGTCTGAGACTAACCACCCGAACGACAGTCAGTACGATGACGACGCCGG
GTGGACCGCGAGGATGCATTACTTGATTCCCGATGATCTGACATGCGATC
ATTGTGTTCTCCAGGCTGTTTACCGCACCGGCCACCGGTGCAGGCACCCC
GGATACGCTGAATTCGAGGGGCCTGAGCCCTTTTCCACCAGCGACTGCGC
CCCCAACAGGGAGGATTGGATCAACGACGGGGGCAGCGGAGTATGCGGGG
AACCCAACACCGCCTACGCTGAGGAGTTCTGGCACTGCACGCACCGGCCA
CCGGTGCAGGCACCCCGGATACGCTGAATTCGAGGGGCCTGAGCCCTTTT
CCACCAGCGACTGCGCCCCCAACAGGGAGGATTGGATCAACGACGGGGGC
AGCGGAGTATGCGGGGAACCCAACACCGCCTACGCTGAGGAGTTCTGGCA
CTGCACCGACTTGAGAATTGTTGGAGCGACTTGAGAATTGTTGGAGGCGC
GGCTCCGGGGCCAACCCCCGAGGAGACCCCCACGCCGGACGAGGGGAACC
CCGAGGAGACCCCCGCCCCTGAATCTGAAACACCCAGCCCTTTTTCTCCC
GAATCCGAACCTGAGACGCCTATCCCCGAGGAGACCCCCGCACCCGAATC
TGAAACACCCAGCCCTATTTTCCCCGAGTCCGAATCTGAGAATTCCAGCC
CCGAGGAGACCCCCGCCCCTGAATCTGAGACGCCTAGCCCTTTTTCTCCC
GAGTCCGAACCTGAGACGCCTACCCCCGAGGAGATCCCCGCACCCGAATC
TGAAACACCCAGCCCTATTTCCCCCGAGTCCGAATCTGAGAATTCCAGCC
CCGAGGAGACCCCCGCACCCGAATCTGAGACGCCTACCCCCGAGGAGACC
CCCACGCCAGACGAGGGGACTCCCGAACCCCAACCTGAGACGCCCAGTCC
TGTTTCTCCCGAGGAGACCCCTGTGGAGGACACCGAGGAGCAGAACTCGC
TGTTGTGCAGCGACGGCACCACCGGCATCGAGTCTCCTAACGGCGCTTGC
TGTGTGTTTGAGTGTGGCGCGCGGCTCCGGGGCCAACCCCCGAGGAGACC
CCCACGCCGGACGAGGGGAACCCCGAGGAGACCCCCGCCCCTGAATCTGA
AACACCCAGCCCTTTTTCTCCCGAATCCGAACCTGAGACGCCTATCCCCG
AGGAGACCCCCGCACCCGAATCTGAAACACCCAGCCCTATTTTCCCCGAG
TCCGAATCTGAGAATTCCAGCCCCGAGGAGACCCCCGCCCCTGAATCTGA
GACGCCTAGCCCTTTTTCTCCCGAGTCCGAACCTGAGACGCCTACCCCCG
AGGAGATCCCCGCACCCGAATCTGAAACACCCAGCCCTATTTCCCCCGAG
TCCGAATCTGAGAATTCCAGCCCCGAGGAGACCCCCGCACCCGAATCTGA
GACGCCTACCCCCGAGGAGACCCCCACGCCAGACGAGGGGACTCCCGAAC
CCCAACCTGAGACGCCCAGTCCTGTTTCTCCCGAGGAGACCCCTGTGGAG
GACACCGAGGAGCAGAACTCGCTGTTGTGCAGCGACGGCACCACCGGCAT
CGAGTCTCCTAACGGCGCTTGCTGTGTGTTTGAGTGTGGC
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