prot_L-elsbetiae_contig717.16002.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig717.16002.1
Unique Nameprot_L-elsbetiae_contig717.16002.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length2954
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig717.16002.1 vs. uniprot
Match: D8LDJ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDJ1_ECTSI)

HSP 1 Score: 228 bits (582), Expect = 2.860e-61
Identity = 201/442 (45.48%), Postives = 256/442 (57.92%), Query Frame = 0 
Query: 2527 RCRHEAAMVLQKNRRRAVSRRAFLLLWGASIKVQSNHRRWRARRTLEQRRLSVRVLQRAAKHFVFNRLRTRAATVLQESYRLHMRKKRCRRQRKAVLEAAGAIQQLVRAWVARRAVSRRREERRMDRAAATLQRAMWGHLHRXXXXXXXXXXXXTLWKFMGGLSVKLSRMREKRRQSSAAEIIQSAFRMRRSRLRLRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKREESAACTXXXXXXXXXXXXXXXXXXXXXXXXAAARIRRWLLRQRRKRTHDIWCERNRS--ALVVQRTWRKSRSSGNANAQRGPASTTVAPSKALPT---------LNRANLQLALDALANGVASCGGRSPSDARQLHEELALREGDPVFETLLCQRLSGLQTALTASCEFAN------KLTEDSTMQRRNGEEALL-QSLRVLEAGLLR 2950
            RCR EAA  LQK RRR   RRA++LL  AS+KV++N+RRWRA+R   QRRL+V +LQ AA+ FVFN  R RAA +LQ +YR  +R K CR++RK +L+AA  +Q+  RAWVARR V +RR+ RR +RAAATLQ AMW HL R            TLWKFMGGLSV LS +R KRR+S+AA  IQ+  R   S ++ RA        XXXXXXXXX                +++E      XXXXXXXXXXXXXX          A +I+ +LL+QRRK      CER R   ALV+QR WR      +A  Q  P +T+     +L T         ++RAN+QLA++ALA G+   G   P  A  L + LAL + DPV E  L Q LS L+ AL  S    +      ++T++S      G +A L  SL  LE GLLR
Sbjct:    5 RCRREAATTLQKYRRRLALRRAYVLLRSASVKVEANYRRWRAQRNCFQRRLAVGILQEAARRFVFNTRRRRAANLLQSAYRSSVRVKHCRKERKKILDAANVLQRSARAWVARRVVGQRRKVRRQNRAAATLQYAMWRHLLRRKKHRQHVAAALTLWKFMGGLSVTLSAIR-KRRKSAAATRIQAVARQYISLVKTRAILDMHRKEXXXXXXXXXACRGRRCRIHLSTLLLEQDEC----HXXXXXXXXXXXXXXRVKTIQHRACAVKIQIFLLQQRRKARFASRCEREREQGALVLQRAWRWRIIGQDAKTQDEPTTTSEQRRSSLATSPRPEPLRAVDRANVQLAVEALAKGMRRRGVLDPIIADNLSDTLALGQDDPVLEVALRQGLSNLEQALARSTGTVSTNTGLKRMTDESVAVLWGGMDASLPHSLEELEQGLLR 441
[Close]
BLAST of mRNA_L-elsbetiae_contig717.16002.1 vs. uniprot
Match: A0A6H5L2G6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2G6_9PHAE)

HSP 1 Score: 202 bits (514), Expect = 2.760e-52
Identity = 177/439 (40.32%), Postives = 229/439 (52.16%), Query Frame = 0 
Query: 2528 CRHEAAMVLQKNRRRAVSRRAFLLLWGASIKVQSNHRRWRARRTLEQRRLSVRVLQRAAKHFVFNRLRTRAATVLQESYRLHMRKKRCRRQRKAVLEAAGAIQQLVRAWVARRAVSRRREERRMDRAAATLQRAMWGHLHRXXXXXXXXXXXXTLWKFMGGLSVKLSRMREKRRQSSAAEIIQSAFRMRRSRLRLRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKREESAACTXXXXXXXXXXXXXXXXXXXXXXXXAAARIRRWLLRQRRKRTHDIWCERNRSALVVQRTWRKSRSSGNANAQRGPASTT--------VAPSKALP-TLNRANLQLALDALANGVASCGGRSPSDARQLHEELALREGDPVFETLLCQRLSGLQTALTASCEFAN------KLTEDSTMQRRNGEE-ALLQSLRVLEAGLLR 2950
            CR EAA  LQK RRR   RRA++LL  AS+KV +N+RRWR +R   QRRL+V +LQ+A++ FVFN  R RAA +LQ +YR   R K  R++RK +L+AA  +Q+  RAWVARR V  RRE +R +RAAA LQ AMW HL R            TLWKFMGGLSV LSR+R KRR+S AA  IQ+  R   S ++ R                                  +        XXXXXXXX                A A   + LL  RRK  +     R + ALV+QR WR+     +A  Q  P +T+         +P    P TL+RAN+QLA+++LA G+   G   P  A  L + LAL + DPV E  L Q LS L+ AL  S    +      ++  +S    R G++ AL  SL+ LE GLLR
Sbjct:   10 CRREAATTLQKYRRRLTLRRAYVLLRSASVKVGANYRRWRTQRDCFQRRLAVGILQKASRRFVFNTRRRRAANLLQSAYRSSARVKHGRKERKKILDAANVLQRSARAWVARRVVGWRREVQRRNRAAAALQHAMWRHLWRRKKHRQHVAAALTLWKFMGGLSVTLSRIR-KRRKSVAATRIQAVARQYISLVKTREILDMHRKERAAATRIQAACRGRRYRKHLTTLQVEXXXXXXXXXXXXXXXXHISRVKTIKRR-----ACALKIQTLLHPRRKARYTS--RREQGALVLQRAWRRKIIGQDAKTQDEPTTTSEQRRSSSATSPRPEPPRTLDRANVQLAVESLAKGMRRRGVLDPIIAENLSDTLALGQDDPVLEVALRQGLSNLEQALLWSTRTISTNTGLKQMAAESVAVVRGGKDVALPHSLKELEQGLLR 440
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig717.16002.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDJ1_ECTSI2.860e-6145.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2G6_9PHAE2.760e-5240.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 2355..2375
NoneNo IPR availableGENE3D1.20.5.190coord: 2732..2780
e-value: 5.5E-7
score: 31.2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..2675
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 2676..2694
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 2695..2953
IPR000048IQ motif, EF-hand binding siteSMARTSM00015iq_5coord: 2551..2573
e-value: 120.0
score: 4.7
coord: 2474..2496
e-value: 2.3
score: 17.2
coord: 2497..2519
e-value: 14.0
score: 12.4
coord: 2528..2550
e-value: 39.0
score: 8.8
coord: 2594..2616
e-value: 98.0
score: 5.5
coord: 2760..2782
e-value: 3.6
score: 16.6
coord: 2650..2672
e-value: 42.0
score: 8.5
coord: 2730..2752
e-value: 0.95
score: 18.5
coord: 2621..2643
e-value: 220.0
score: 2.6
coord: 2701..2723
e-value: 9.6
score: 13.8
coord: 2424..2446
e-value: 21.0
score: 11.0
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 2761..2790
score: 8.608
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 2425..2454
score: 6.687
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 2555..2580
score: 6.595
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 2498..2527
score: 7.95
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 2624..2650
score: 7.602
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 2734..2760
score: 9.468
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 2651..2679
score: 6.632
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 2702..2731
score: 6.815
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 2595..2624
score: 7.218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig717contigL-elsbetiae_contig717:652..17681 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig717.16002.1mRNA_L-elsbetiae_contig717.16002.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig717 233..18742 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig717.16002.1 ID=prot_L-elsbetiae_contig717.16002.1|Name=mRNA_L-elsbetiae_contig717.16002.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=2954bp
MSGRAAALPSFDGAHHAGSESWQSETAEEHARAQPRSLDLVAATVPLIPS
FPESSAEVRVWVRRILLPCTGHALAAPPYVRASLYPGAHCVGRTGLPSTN
QSSSASAREGGVPLVGHPPTERVVEYMFGGKDGGANGEQHTISLPLGPRV
VDKALDENGGSSPPRIRLEIVSGRSLGWCDLALPEVLRRPGGVVRKVQVP
VWRKAWVHGRAKNYGGNKIWPRFGSSTPGYHPPHQDNMPVGEIILDLGVM
LSGEPCPSPPSETENGALELSAGTILVEAGKVRTRDTEKGGIALSAVERP
VLIGVSSTLTLGKGGPKISAFAEGRGSRWAEEGKPGYSTLRDDISGHDGK
VTLMTTCAELDILTLRLVQGGDGGGRRSHSSGLGLGQGHGRGGDALMIAV
SDINDIFDGRWHWVAMRHDYFVGGASDGQKGVHPPGGTPAVRGRGKGSAG
RRLEVMLRISLADAVSLLPHGHHRTSSTGGRSTAEDPLPRHKSGYLSAPP
ADDSPSMEEPPLRSGGTPRSALEAWVTSPSNGCAQATVVVPSQGTNSSGW
ATEHPKGGTPVAGGAEKSAGYPSQAGPGVLELEVLAIHGEGQELRRVTAC
EKDGYDGKRKSASISSLSSAWWVRVTFSNGGRGGGGRSDVFSIDSPPGKM
ASLEQSPARGGGGGGGTGAVASPPPLHQHDAEGSESDWVVRWPPHGGLLA
KYPVHWTLSQNALPVVTFEVFRGQTLAARSVLELPPVVKHREGPFAFFLP
CLRIGPQKTGALKPSHSKTPGANVFLELRCSFGTNGGKNKRQGLDVGNAV
APGVSGPPSEMDVRQGGVLCIQVVAIQRLHRSVKSALALPCSVLFSLPLH
HTESPSVGWGSPSYGGGGWAGTGGGERSVDCNHNKEGQKRRGDRDGGIAV
LRVESRKHRSVVALVAILGGDGGECQSETSDSLGRRDTDTTTTNESVLGA
TWLPISDNVMERGHLEDGWYPLRIIGRGWNSASKACDIRLRTHFIPALQH
PAAGLSFGGPPVRPSTEFLTVVLEEGRHLSHPGLLVGPFELFAEVTVDYQ
PGKEARGHQASCGTGDPRPKSKVARSKMMVGPLPLRGEPCSHEGHHAPHS
AARRLGNGASPCWQHVMRIPLPAATGLAGNKWGSSGVFDDPAPNPNPGVA
GIGRDGNYPPKAMLSVTIKSAAMRVTTRYPSPAPRRLLTSCSNGHVQQPE
ERITERCLLVGVARIRLPSGIFRRERGQEEGAPVRGWYAVKDEASGAHRG
KVRLSIFPASTSTSCAHHGNNGHANDGSSSSSCSSNAGPVDDSKDCRPEG
PSCGSKEPRLAGCNPRRPRSSGNTDGFVSDSSRQSAETDEAVVALRRARG
YHLPEGLKGAGLLFVSIGDLVVHSSRNEVRQPYATLVGACVSLRTRRHRN
RHHPDEGRPHHLTNARTDGHTHFSRGPNGSAHAASSSERDNREFGAAVAV
DRYYSGPDDYPALYVQVHVKTSHRSASTAYHGVVPLASCLSSAGISVQER
KGLMKMERQAVFQGGGGHTKARAGDRGLLGGSRSADDDGRSNETPLTSSG
SDEGGTDVDGGGWAKGATRDEKTKGGCCAVSVTTSFVPHVSGVLELDPLQ
LSLTPPSRSDIQRRRDLTELRERTETEGLGEKNSQMGLAQVPAAEDLGRD
AVRATTAFLRLGILPAGPWKFSRTFPLKLPRPVDWARDPSSAGTSQIPGD
GRVVLDLNTAVHAVARERAPTPSSSVPSPAAGAADSRQDCGVEVEPLALE
VCLFDNGTRSSSPSVPPSSSALLGLGTIVLTPIIVSHMQQEESKDSGERE
VLLFEPGSGKAIASALVEISFSSHSGGCVGDVLPPPTESSHIADAANTST
GRLSEIFDMSTAVWALKAVFYTVDRGSAGLVRVEDILAALSDARWPGGTP
ASGPPYPRRIIGNVGGVPSSETPGPDSDGHAKEDAETLLNHLRGLGVGAE
CSGGGRDNDDVQGDNGGVVRYIRHLLAPPDSKGDGQHVSWEVWAALSELI
VCRNTQNIRQGKAGFLPPVTAACVWQRVEQIRFAENIKNADPAAGDTLRT
DCRGSHGVGDLGKWPAAGFDGFGSGYGDISFWAEEYVSRGQHAPKECCNA
VGTGRCTSRKHPHKTEPSSLAVRGRPNSAPQTSNASKGRLHQTLDTSRRS
WLQRSRQHRQLRRGQGSTSGGDSRAPRRSSSSPSHRIGAAVSARIPPNER
AETPDLHRRVPGRKGAEEPIAAIRRRPTTAPAVVAAGPADPSSGTKERST
RDPSHPKTFGRSASARQGPCQSAHDTARLLYGLGGGLQPGLDNGMGCAPR
GSRGMWNEGGVADGGWSEFDWSGEGAAPRDDMENGYLRTEFASAKRKAAA
YQKCMLEAERALGKEHQRVQALEERALELEGLLLQRDWDRIREEARARTR
FMQVGVEVARRNERVASRNQRARVEAVAATRLQWIAKGYLQQCRFKAEIL
RIRALQRGGRSMLQARRRHHSRVRRTMVALLLQRVWRGRSARKRLAIREV
RVTLVQAVVRGHLQRTRISDELQAHLRCRHEAAMVLQKNRRRAVSRRAFL
LLWGASIKVQSNHRRWRARRTLEQRRLSVRVLQRAAKHFVFNRLRTRAAT
VLQESYRLHMRKKRCRRQRKAVLEAAGAIQQLVRAWVARRAVSRRREERR
MDRAAATLQRAMWGHLHRRKEHRRRVAAALTLWKFMGGLSVKLSRMREKR
RQSSAAEIIQSAFRMRRSRLRLRALRAKGREIVAASKIQAVTRGHRSRAR
AKTLRSKKREESAACTKIQAASRGHRSRVETGNLRAKQRAAAARIRRWLL
RQRRKRTHDIWCERNRSALVVQRTWRKSRSSGNANAQRGPASTTVAPSKA
LPTLNRANLQLALDALANGVASCGGRSPSDARQLHEELALREGDPVFETL
LCQRLSGLQTALTASCEFANKLTEDSTMQRRNGEEALLQSLRVLEAGLLR
PSE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS