mRNA_L-elsbetiae_contig7167.15998.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7167.15998.1 vs. uniprot
Match: D7FSI9_ECTSI (Villin villin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSI9_ECTSI) HSP 1 Score: 156 bits (394), Expect = 1.660e-42 Identity = 74/82 (90.24%), Postives = 78/82 (95.12%), Query Frame = 1 Query: 13 RNRQVPCSTDSLNTGDVFILDAGLKLYLWSGPEANMYEKSKGVQSMQRIKDTDRAGRATMTFLDDDPENAEFWDSLGGYTEA 258 R +V CSTDSLN GDVFILDAGLKLYLWSGP+ANMYEKSKGVQSMQRIKDTDRAGRATMTFLDDDPENAEFWD+LGGYTE+ Sbjct: 107 RVSEVACSTDSLNNGDVFILDAGLKLYLWSGPDANMYEKSKGVQSMQRIKDTDRAGRATMTFLDDDPENAEFWDTLGGYTES 188
BLAST of mRNA_L-elsbetiae_contig7167.15998.1 vs. uniprot
Match: A0A835YKP2_9STRA (Villin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKP2_9STRA) HSP 1 Score: 105 bits (261), Expect = 2.040e-24 Identity = 50/80 (62.50%), Postives = 62/80 (77.50%), Query Frame = 1 Query: 22 QVPCSTDSLNTGDVFILDAGLKLYLWSGPEANMYEKSKGVQSMQRIKDTDRAGRATMTFLDDDPENAEFWDSLGGYTEAS 261 +VP S SLNTGDVFILDAGL LYL++G A+ EKSKGV+++ RIKD +R GRA + F+ +DP NAEFWD LGGY E + Sbjct: 151 EVPLSGSSLNTGDVFILDAGLTLYLYNGAGASRAEKSKGVETITRIKDDERGGRAQVVFIHEDPTNAEFWDLLGGYVEVT 230
BLAST of mRNA_L-elsbetiae_contig7167.15998.1 vs. uniprot
Match: A0A835YLA3_9STRA (Villin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLA3_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 2.970e-22 Identity = 46/81 (56.79%), Postives = 61/81 (75.31%), Query Frame = 1 Query: 13 RNRQVPCSTDSLNTGDVFILDAGLKLYLWSGPEANMYEKSKGVQSMQRIKDTDRAGRATMTFLDDDPENAEFWDSLGGYTE 255 R +VP ++ SLNTGDVF+LDAGL LY++ G A+ EK+KGV++ RIKD +R G+A + + +DPEN EFWD LGGYTE Sbjct: 142 RISEVPVASSSLNTGDVFVLDAGLALYVYVGAGASSAEKAKGVETAARIKDDERQGQAKVVLISEDPENKEFWDLLGGYTE 222
BLAST of mRNA_L-elsbetiae_contig7167.15998.1 vs. uniprot
Match: A0A812THK7_SYMMI (Gel protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812THK7_SYMMI) HSP 1 Score: 93.2 bits (230), Expect = 1.100e-20 Identity = 42/78 (53.85%), Postives = 58/78 (74.36%), Query Frame = 1 Query: 13 RNRQVPCSTDSLNTGDVFILDAGLKLYLWSGPEANMYEKSKGVQSMQRIKDTDRAGRATMTFLDDDPENAEFWDSLGG 246 R R+VP S SLNTGDVFILD GLK+++++G AN +EK+KG+ +I++ +R GRA + LD+DP N+EFW LGG Sbjct: 106 RVREVPLSNASLNTGDVFILDTGLKIFVYNGATANRHEKAKGIDVANKIRNEERGGRAEIFMLDEDPNNSEFWTPLGG 183
BLAST of mRNA_L-elsbetiae_contig7167.15998.1 vs. uniprot
Match: A0A4Q3BE30_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4Q3BE30_9BACT) HSP 1 Score: 93.6 bits (231), Expect = 1.800e-20 Identity = 43/81 (53.09%), Postives = 57/81 (70.37%), Query Frame = 1 Query: 13 RNRQVPCSTDSLNTGDVFILDAGLKLYLWSGPEANMYEKSKGVQSMQRIKDTDRAGRATMTFLDDDPENAEFWDSLGGYTE 255 R V S SLN GDVFILD GLK++L++GP AN +EK+KG++ RI +R GRA + FLD DP NA+FW +LGG+ + Sbjct: 104 RVSSVAVSKASLNRGDVFILDQGLKIFLFNGPGANKFEKAKGLEVASRINSDERGGRAELVFLDSDPRNADFWSALGGFVD 184
BLAST of mRNA_L-elsbetiae_contig7167.15998.1 vs. uniprot
Match: A0A7S3MB93_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MB93_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 3.050e-19 Identity = 41/81 (50.62%), Postives = 57/81 (70.37%), Query Frame = 1 Query: 13 RNRQVPCSTDSLNTGDVFILDAGLKLYLWSGPEANMYEKSKGVQSMQRIKDTDRAGRATMTFLDDDPENAEFWDSLGGYTE 255 R +VP S SLN GDVFILDAGLK+YL++GP +N YEK+KGVQ I + +R RA + + ++P++ EFW LGG+ + Sbjct: 103 RVSEVPLSRSSLNHGDVFILDAGLKIYLFNGPTSNNYEKAKGVQVASNINNDERGARAEIILVHENPKDEEFWGPLGGFVD 183
BLAST of mRNA_L-elsbetiae_contig7167.15998.1 vs. uniprot
Match: A0A2P4WYP2_9STRA (Villin-like protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WYP2_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 7.040e-19 Identity = 41/83 (49.40%), Postives = 57/83 (68.67%), Query Frame = 1 Query: 13 RNRQVPCSTDSLNTGDVFILDAGLKLYLWSGPEANMYEKSKGVQSMQRIKDTDRAGRATMTFLDDDPENAEFWDSLGGYTEAS 261 R QVP + SL D ++LDAGL+LYL++G E N EK K ++ + + ++ R GRA +TF+D+DPENA FWD+LGGY S Sbjct: 146 RVEQVPLQSSSLTVDDAYVLDAGLELYLYAGKETNRLEKGKALEFISKTREA-RGGRANVTFIDEDPENAAFWDALGGYEAVS 227
BLAST of mRNA_L-elsbetiae_contig7167.15998.1 vs. uniprot
Match: A0A5D6XQ13_9STRA (HP domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQ13_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 9.690e-19 Identity = 38/83 (45.78%), Postives = 62/83 (74.70%), Query Frame = 1 Query: 13 RNRQVPCSTDSLNTGDVFILDAGLKLYLWSGPEANMYEKSKGVQSMQRIKDTDRAGRATMTFLDDDPENAEFWDSLGGYTEAS 261 R QVP S+ SL DV++LDAGL+L++++G AN EK+KG++ ++++ + R GRA +TF+D+DP NA FW++LGG+ + + Sbjct: 134 RVAQVPLSSASLTADDVYVLDAGLELFVFNGKSANRMEKAKGLEFVRKLNNDARGGRANITFMDEDPRNAAFWNALGGFADVT 216
BLAST of mRNA_L-elsbetiae_contig7167.15998.1 vs. uniprot
Match: A0A8K1CGN4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGN4_PYTOL) HSP 1 Score: 89.0 bits (219), Expect = 9.690e-19 Identity = 37/83 (44.58%), Postives = 60/83 (72.29%), Query Frame = 1 Query: 13 RNRQVPCSTDSLNTGDVFILDAGLKLYLWSGPEANMYEKSKGVQSMQRIKDTDRAGRATMTFLDDDPENAEFWDSLGGYTEAS 261 R QVP SL DV++LD GL+LY+++G +AN EK+KG++ ++++ + DR RA +TF+++DP+NA FW +LGGY + + Sbjct: 146 RVTQVPVKNSSLTVDDVYVLDVGLELYVFNGKDANRQEKAKGLEFVRKLNNDDRGARANITFIEEDPKNATFWSTLGGYIDVT 228
BLAST of mRNA_L-elsbetiae_contig7167.15998.1 vs. uniprot
Match: A0A225WW31_9STRA (Villin n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WW31_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 9.770e-19 Identity = 41/83 (49.40%), Postives = 60/83 (72.29%), Query Frame = 1 Query: 13 RNRQVPCSTDSLNTGDVFILDAGLKLYLWSGPEANMYEKSKGVQSMQRIKDTDRAGRATMTFLDDDPENAEFWDSLGGYTEAS 261 R QVP S+ SL D ++LDAGL+LYL++G EAN EK+K ++ + + ++ R GRA +TF+D+DPENA FW++LGG+ S Sbjct: 146 RVEQVPLSSSSLTVDDAYVLDAGLELYLYAGKEANRLEKAKALEFVTKTREA-RGGRANVTFVDEDPENAAFWEALGGFETVS 227 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7167.15998.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7167.15998.1 >prot_L-elsbetiae_contig7167.15998.1 ID=prot_L-elsbetiae_contig7167.15998.1|Name=mRNA_L-elsbetiae_contig7167.15998.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=87bp MSSCRNRQVPCSTDSLNTGDVFILDAGLKLYLWSGPEANMYEKSKGVQSMback to top mRNA from alignment at L-elsbetiae_contig7167:286..999- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7167.15998.1 ID=mRNA_L-elsbetiae_contig7167.15998.1|Name=mRNA_L-elsbetiae_contig7167.15998.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=714bp|location=Sequence derived from alignment at L-elsbetiae_contig7167:286..999- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7167:286..999- >mRNA_L-elsbetiae_contig7167.15998.1 ID=mRNA_L-elsbetiae_contig7167.15998.1|Name=mRNA_L-elsbetiae_contig7167.15998.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=522bp|location=Sequence derived from alignment at L-elsbetiae_contig7167:286..999- (Laminarionema elsbetiae ELsaHSoW15)back to top |