mRNA_L-elsbetiae_contig7097.15899.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7097.15899.1 vs. uniprot
Match: A0A6H5KL08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL08_9PHAE) HSP 1 Score: 188 bits (477), Expect = 1.380e-53 Identity = 101/183 (55.19%), Postives = 116/183 (63.39%), Query Frame = -1 Query: 215 LDVDFISAHQLVRGARWLPRRFI*DTLG*SWYPVLGT*G-----GLGAASPHILLYWSGTVCQHMQGNRAYRVAHSRAAHRELARSRGDRYFDNGYSLVSVDVWSNRFSSSPLPINARLWYKAQDGLWWSGKISTKQDDSYIARLFDDTGPRRLHLPPTSYSTALDAAIGSWCLEKHRSRPLG 748 L VD+IS HQLVRG RR + L + + L T L + HILLYWS + Q QGNRAYR +RAA RELAR+RG+RY G LV + W RFSSSPLP+ ARLWYKA+DGLWW+G I Q DSYI R DD GP L LP YSTAL+A GSWCLEKHRSR +G Sbjct: 208 LKVDYISGHQLVRG-----RRGVLAVLYHTHWIGLATPSWERESDLEQSRRHILLYWSREISQSKQGNRAYRNTRTRAAQRELARTRGERYLPPGADLVLHETWLRRFSSSPLPVGARLWYKARDGLWWTGLIGAHQGDSYIVRFLDDPGPTVLPLPEDLYSTALNAVCGSWCLEKHRSRLVG 385
BLAST of mRNA_L-elsbetiae_contig7097.15899.1 vs. uniprot
Match: A0A6H5JK47_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK47_9PHAE) HSP 1 Score: 192 bits (488), Expect = 3.340e-52 Identity = 102/183 (55.74%), Postives = 117/183 (63.93%), Query Frame = -1 Query: 215 LDVDFISAHQLVRGARWLPRRFI*DTLG*SWYPVLGT*G-----GLGAASPHILLYWSGTVCQHMQGNRAYRVAHSRAAHRELARSRGDRYFDNGYSLVSVDVWSNRFSSSPLPINARLWYKAQDGLWWSGKISTKQDDSYIARLFDDTGPRRLHLPPTSYSTALDAAIGSWCLEKHRSRPLG 748 L VD+IS HQLVRG R + L + + L T L + HILLYWS + Q QGNRAYR +RAA RELAR+RG+RY G LV + W RFSSSPLP+ ARLWYKA+DGLWW+G+I Q DSYI R DD GP L LP YSTAL+A GSWCLEKHRSRPLG Sbjct: 2004 LKVDYISGHQLVRG-----RSGVLAVLYHTHWIGLATPSWERESDLEQSRRHILLYWSREISQSKQGNRAYRNTRTRAAQRELARTRGERYLPPGADLVLHETWLRRFSSSPLPVGARLWYKARDGLWWTGRIGAHQGDSYIVRFLDDPGPSVLPLPEDLYSTALNAVCGSWCLEKHRSRPLG 2181
BLAST of mRNA_L-elsbetiae_contig7097.15899.1 vs. uniprot
Match: A0A6H5KZ08_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ08_9PHAE) HSP 1 Score: 152 bits (384), Expect = 2.770e-39 Identity = 82/166 (49.40%), Postives = 95/166 (57.23%), Query Frame = -1 Query: 251 LDVDFISAHQLVRGARWLPRRFI*DTLG*SWYPVLGT*GGLGAASPHILLYWSGTVCQHMQGNRAYRVAHSRAAHRELARSRGDRYFDNGYSLVSVDVWSNRFSSSPLPINARLWYKAQDGLWWSGKISTKQDDSYIARLFDDTGPRRLHLPPTSYSTALDAAIGS 748 L+VD+IS HQLVRG + P L HILLYWS CQ QG+ YRV +RAA +ELAR+RG+RY G LV W +RFS+SPLP+ ARLWYKA DGLWW+G+I Q SYI R DD GP L LP ST LDA GS Sbjct: 368 LEVDYISGHQLVRGRSGVLAVLYQTHWVGLTTPSWERESDLDLFRRHILLYWSREACQSKQGHHTYRVGRTRAAQQELARNRGERYVHPGDDLVLNATWLHRFSTSPLPVGARLWYKACDGLWWTGRIGAHQGGSYIVRFLDDPGPSVLPLPAHLNSTGLDAVCGS 533
BLAST of mRNA_L-elsbetiae_contig7097.15899.1 vs. uniprot
Match: A0A6H5JZB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZB2_9PHAE) HSP 1 Score: 144 bits (364), Expect = 1.190e-35 Identity = 81/166 (48.80%), Postives = 92/166 (55.42%), Query Frame = -1 Query: 248 LVRGARWLPRRFI*DTLG*S---WYPV------LGT*GGLGAASPHILLYWSGTVCQHMQGNRAYRVAHSRAAHRELARSRGDRYFDNGYSLVSVDVWSNRFSSSPLPINARLWYKAQDGLWWSGKISTKQDDSYIARLFDDTGPRRLHLPPTSYSTALDAAIGSW 718 LV WL RRF L WY G L I+L WS CQ QGN YRVA +RAA RELAR+RG+R+ G LV W RFS+SPLP+ ARLWYKA+DGLWW+G+I Q S I R DD GP L LP +STALDA GSW Sbjct: 1052 LVLNVTWL-RRFSTSPLPVGARLWYKARDGLWWTGGESDLDQFRRRIILNWSREACQSKQGNCTYRVARTRAAQRELARNRGERFLPPGADLVLNVTWLRRFSTSPLPVGARLWYKARDGLWWTGRIGAHQGGSCIVRFLDDPGPSVLPLPAHLFSTALDAVCGSW 1216
BLAST of mRNA_L-elsbetiae_contig7097.15899.1 vs. uniprot
Match: A0A6H5J9W8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9W8_9PHAE) HSP 1 Score: 131 bits (330), Expect = 4.020e-31 Identity = 72/143 (50.35%), Postives = 87/143 (60.84%), Query Frame = -1 Query: 335 LDVDFISAHQLVRGARWLPRRFI*DTLG*SWYPVLGT*G-----GLGAASPHILLYWSGTVCQHMQGNRAYRVAHSRAAHRELARSRGDRYFDNGYSLVSVDVWSNRFSSSPLPINARLWYKAQDGLWWSGKISTKQDDSYIA 748 L VD+IS HQLVRG R + L + + L T L + HILLYWS + Q QGNRAYR +RAA RELAR+RG+RY G LV + W RFSSSPLP+ ARLWYKA+D LWW+G+I Q DSY + Sbjct: 990 LKVDYISGHQLVRG-----RSGVLAVLYHTHWIGLATPSWERESDLEQSRRHILLYWSREISQSKQGNRAYRNTRTRAAQRELARTRGERYLPPGADLVLHETWLRRFSSSPLPVGARLWYKARDRLWWTGRIGAHQGDSYCS 1127
BLAST of mRNA_L-elsbetiae_contig7097.15899.1 vs. uniprot
Match: A0A6H5KRJ7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRJ7_9PHAE) HSP 1 Score: 108 bits (271), Expect = 2.770e-23 Identity = 64/123 (52.03%), Postives = 73/123 (59.35%), Query Frame = -1 Query: 383 LDVDFISAHQLVRGARW-LPRRFI*DTLG*SWYPVLGT*GGLGAASPHILLYWSGTVCQHMQGNRAYRVAHSRAAHRELARSRGDRYFDNGYSLVSVDVWSNRFSSSPLPINARLWYKAQDGL 748 L+VD+ S HQLVRG L + LG + P L HILL W VCQ QGNRAYRVA +RAA RELARSRG+ Y +G LV W FS+SPLP+ ARLWYKA DGL Sbjct: 874 LEVDYTSGHQLVRGRSGVLAVLYQTHWLGLTT-PSWERESDLDRFRRHILLRWFREVCQSKQGNRAYRVARTRAAQRELARSRGEHYLPHGADLVLHATWLRGFSTSPLPVGARLWYKASDGL 995
BLAST of mRNA_L-elsbetiae_contig7097.15899.1 vs. uniprot
Match: A0A6H5KTX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTX6_9PHAE) HSP 1 Score: 108 bits (270), Expect = 3.970e-23 Identity = 63/122 (51.64%), Postives = 74/122 (60.66%), Query Frame = -1 Query: 386 LDVDFISAHQLVRGARW-LPRRFI*DTLG*SWYPVLGT*GGLGAASPHILLYWSGTVCQHMQGNRAYRVAHSRAAHRELARSRGDRYFDNGYSLVSVDVWSNRFSSSPLPINARLWYKAQDG 748 L+VD+IS HQLVRG L + +G + P L HILLY S CQ QGNR YRVA +RAA RELAR+RG+RY G LV W RFS+SPLP+ ARLWYKA+DG Sbjct: 1278 LEVDYISGHQLVRGRSGALAVLYQTHWVGLTT-PSWERESDLDLFRRHILLYLSREACQSKQGNRTYRVARTRAAQRELARNRGERYLPPGADLVLNATWLRRFSTSPLPVGARLWYKARDG 1398
BLAST of mRNA_L-elsbetiae_contig7097.15899.1 vs. uniprot
Match: A0A6H5JVY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVY6_9PHAE) HSP 1 Score: 104 bits (260), Expect = 8.600e-22 Identity = 58/115 (50.43%), Postives = 65/115 (56.52%), Query Frame = -1 Query: 404 LDVDFISAHQLVRGARWLPRRFI*DTLG*SWYPVLGT*GGLGAASPHILLYWSGTVCQHMQGNRAYRVAHSRAAHRELARSRGDRYFDNGYSLVSVDVWSNRFSSSPLPINARLW 748 L+VD+IS HQLVRG + P L HILLYWS CQ QGNR YRVA +RAA RELAR+RG+RYF G V W RFS+SPLPI ARLW Sbjct: 1608 LEVDYISGHQLVRGRSGVLAVLYQTHWVGLTTPSWERESDLDLFRRHILLYWSREACQSKQGNRTYRVARTRAAQRELARNRGERYFPPGADFVLSATWLRRFSTSPLPIGARLW 1722
BLAST of mRNA_L-elsbetiae_contig7097.15899.1 vs. uniprot
Match: A0A6H5KDL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDL4_9PHAE) HSP 1 Score: 95.1 bits (235), Expect = 1.610e-18 Identity = 54/114 (47.37%), Postives = 63/114 (55.26%), Query Frame = -1 Query: 407 LDVDFISAHQLVRGARWLPRRFI*DTLG*SWYPVLGT*GGLGAASPHILLYWSGTVCQHMQGNRAYRVAHSRAAHRELARSRGDRYFDNGYSLVSVDVWSNRFSSSPLPINARL 748 L+VD+IS HQLVRG + P L HILLYWS CQ + NR YRVA +RAA RELAR+RG+RY G LV W RFS+SPLP+ ARL Sbjct: 860 LEVDYISGHQLVRGRSGVLAVLYQTHWVGLTTPSWERESDLDLFRRHILLYWSREACQSKRDNRTYRVARTRAAQRELARNRGERYLPPGADLVLNATWLRRFSTSPLPVGARL 973
BLAST of mRNA_L-elsbetiae_contig7097.15899.1 vs. uniprot
Match: A0A6H5KJ79_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ79_9PHAE) HSP 1 Score: 72.4 bits (176), Expect = 7.460e-11 Identity = 42/86 (48.84%), Postives = 48/86 (55.81%), Query Frame = -1 Query: 491 LDVDFISAHQLVRGARWLPRRFI*DTLG*SWYPVLGT*GGLGAASPHILLYWSGTVCQHMQGNRAYRVAHSRAAHRELARSRGDRY 748 L+VD+IS HQLVRG + P L HILLYWS CQ QGNR YRVA +RAA RELAR+RG+RY Sbjct: 514 LEVDYISGHQLVRGRSGVLAVLCQTHWVGLTTPSWERESDLDLFRRHILLYWSREACQSKQGNRTYRVARTRAAQRELARNRGERY 599 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7097.15899.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7097.15899.1 >prot_L-elsbetiae_contig7097.15899.1 ID=prot_L-elsbetiae_contig7097.15899.1|Name=mRNA_L-elsbetiae_contig7097.15899.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=156bp MQTSGSGVVEEASDVGVILFGRDFSRPPQAVLSLVPEAGVDGQGGGRETIback to top mRNA from alignment at L-elsbetiae_contig7097:1814..2579+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7097.15899.1 ID=mRNA_L-elsbetiae_contig7097.15899.1|Name=mRNA_L-elsbetiae_contig7097.15899.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=766bp|location=Sequence derived from alignment at L-elsbetiae_contig7097:1814..2579+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7097:1814..2579+ >mRNA_L-elsbetiae_contig7097.15899.1 ID=mRNA_L-elsbetiae_contig7097.15899.1|Name=mRNA_L-elsbetiae_contig7097.15899.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=936bp|location=Sequence derived from alignment at L-elsbetiae_contig7097:1814..2579+ (Laminarionema elsbetiae ELsaHSoW15)back to top |