prot_L-elsbetiae_contig7029.15828.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7029.15828.1
Unique Nameprot_L-elsbetiae_contig7029.15828.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length102
Homology
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BLAST of mRNA_L-elsbetiae_contig7029.15828.1 vs. uniprot
Match: D7FIX0_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIX0_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 4.000e-17
Identity = 44/69 (63.77%), Postives = 51/69 (73.91%), Query Frame = 0 
Query:    4 RFLVLEHGTLLVYASEDDWAEHQEPLDDVPLSADSTVEAVQEGGELLVKLRCPDHPPLSFSGSAVPASD 72
            RFLVL+H  LLVYAS+ DWA+HQEPLDDV LSA+S VE  +E    LVKLR P H PL F+ SAV  +D
Sbjct:   15 RFLVLDHAVLLVYASKSDWADHQEPLDDVVLSAESVVETTREREGALVKLRGPGHSPLCFTCSAVNVND 83
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7029.15828.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIX0_ECTSI4.000e-1763.77Ankyrin Repeat Transient Receptor Potential Channe... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.485

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7029contigL-elsbetiae_contig7029:4694..5994 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7029.15828.1mRNA_L-elsbetiae_contig7029.15828.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7029 4694..5994 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7029.15828.1 ID=prot_L-elsbetiae_contig7029.15828.1|Name=mRNA_L-elsbetiae_contig7029.15828.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=102bp
MFSRFLVLEHGTLLVYASEDDWAEHQEPLDDVPLSADSTVEAVQEGGELL
VKLRCPDHPPLSFSGSAVPASDDAGTGAGDDDESKSVDHDSAGPDSGAWK
KA
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