prot_L-elsbetiae_contig6977.15755.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6977.15755.1
Unique Nameprot_L-elsbetiae_contig6977.15755.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length235
Homology
BLAST of mRNA_L-elsbetiae_contig6977.15755.1 vs. uniprot
Match: A0A6H5L7H3_9PHAE (DNA_MISMATCH_REPAIR_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L7H3_9PHAE)

HSP 1 Score: 348 bits (894), Expect = 5.940e-112
Identity = 183/234 (78.21%), Postives = 200/234 (85.47%), Query Frame = 0
Query:    1 MSDSPLRALGSSGGKDEVDRPIVALKFKLAKHQRTVGVAARLPRQREGMEDKVRWTLVVYEFLDNDQFSNLDTLMLQLAPGRCLLSLDAGAIEGKPRGDMAKVLAAMERLDVTVKDVKATHFKTDDVGARMRALLGDASLAQHSLATEQPVGTACLAALMGHLERKGGDGXXXXXXXXXXXXXXSPEMAPSYALVQGTLQKHLRLDSAAAAAVTLLPDPTAPHQYGSLYGVLNR 234
            MSDS   +L SSGGKDEVDRP+ A+KFK+++HQRTVGVAAR+PRQREGMEDKVRWTLVVYEFLDNDQFSNLDTLMLQLAPG+CLL+LDAGA EGKPRGDMAKVLAAMERLDV V+DVK   FKTDD+  RM+ LLGDASLAQ+SLA EQP+G+ACLAALMG LER+  D               SPEM PSYALVQGTLQKHLRLDSAAAAAVTLLPDPTAPHQYGSL+ VLNR
Sbjct:    1 MSDSLQSSLASSGGKDEVDRPLCAVKFKVSRHQRTVGVAARMPRQREGMEDKVRWTLVVYEFLDNDQFSNLDTLMLQLAPGQCLLTLDAGAAEGKPRGDMAKVLAAMERLDVAVEDVKGGQFKTDDIAGRMKDLLGDASLAQYSLANEQPLGSACLAALMGRLEREDKD------YQSEEGEGESPEM-PSYALVQGTLQKHLRLDSAAAAAVTLLPDPTAPHQYGSLFDVLNR 227          
BLAST of mRNA_L-elsbetiae_contig6977.15755.1 vs. uniprot
Match: A0A835YUY7_9STRA (Muts protein-like protein 2A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUY7_9STRA)

HSP 1 Score: 143 bits (360), Expect = 1.700e-35
Identity = 87/220 (39.55%), Postives = 122/220 (55.45%), Query Frame = 0
Query:   16 DEVDRPIVALKFKLAKHQRTVGVAARLPRQREGMEDKVRWTLVVYEFLDNDQFSNLDTLMLQLAPGRCLLSLDAGAIEGKPRGDMAKVLAAMERLDVTVKDVKATHFKTDDVGARMRALLGDASLAQHSLATEQPVGTACLAALMGHLE-RKGGDGXXXXXXXXXXXXXXSPEMAPSYALVQGTLQKHLRLDSAAAAAVTLLPDPTAPHQYGSLYGVLNR 234
            +E++   VA+K  +   QRTVG+ AR+P  R+  +D V W LV YEFLDN+QFSNLD+L+LQL P    ++ + G+ EGKP+GD+AK++  +ER  +         F  +                      E+P+ TAC+AAL+  LE  K  DG                    SY +VQG+L+++++LDSAAA AVTLLPDP  P    S+Y VLNR
Sbjct:    3 EELETCSVAIKLGVKAQQRTVGLCARIPSPRDSEDDTVYWRLVSYEFLDNEQFSNLDSLLLQLGPAEAFVAAEPGSKEGKPKGDLAKLVNMLERRQI--------EFTNE---------------------LERPLATACIAALLKELELEKAEDG--------------------SYRVVQGSLEQYVKLDSAAADAVTLLPDPAFPGANASIYAVLNR 173          
BLAST of mRNA_L-elsbetiae_contig6977.15755.1 vs. uniprot
Match: A0A7S2UZG6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZG6_9STRA)

HSP 1 Score: 112 bits (279), Expect = 6.570e-28
Identity = 58/114 (50.88%), Postives = 74/114 (64.91%), Query Frame = 0
Query:   17 EVDRPIVALKFKLAKHQRTVGVAARLPRQREG--MEDKVRWTLVVYEFLDNDQFSNLDTLMLQLAPGRCLLSLDAGAIEGKPRGDMAKVLAAMERLDVTVKDVKATHFKTDDVG 128
            E + PI+A+++   +HQRTVGVA R  R R G  MED VRWTL VY+FLDNDQFSNLD L++QL PGRC L    GA    P+GD+AK+ A  ER +V   +    +F+    G
Sbjct:    8 EPEAPIMAVQYSSRQHQRTVGVAVRSARARSGSEMEDSVRWTLSVYQFLDNDQFSNLDMLLVQLGPGRCYLPKPEGA--SAPKGDVAKIEAVFERREVATHEAPRQYFRAGSSG 119          
BLAST of mRNA_L-elsbetiae_contig6977.15755.1 vs. uniprot
Match: A0A8K1FEG9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FEG9_PYTOL)

HSP 1 Score: 104 bits (260), Expect = 5.210e-22
Identity = 79/231 (34.20%), Postives = 112/231 (48.48%), Query Frame = 0
Query:   16 DEVDRPI--VALKFKLAKHQRTVGVAARLPRQREGM------EDKVRWTLVVYEFLDNDQFSNLDTLMLQLAPGRCLLSLDAGAIEGKPRGDMAKVLAAMERLDVTVKDVKATHFKTDDVGARMRALLGDASLAQHSLATEQPVGTACLAALMGHLE-RKGGDGXXXXXXXXXXXXXXSPEMAPSYALVQGTLQKHLRLDSAAAAAVTLLPDPTAPHQY---GSLYGVLNR 234
            D  D P+  +AL+ K  KH + VGVA R PR R         ED  +W LV+Y F D+ + +NL+TL++QLAP +C LS +    +    GD  KV A ++ LDV    +K   FK   +   +  LLG +SLA +    +  +    LA L+  LE     DG                     YAL  G+L   ++LDSAA  ++ LLPDP+        GS+  +LNR
Sbjct:    3 DVEDAPLAEIALQIKNTKHLKQVGVAVRRPRPRRSCVKGSADEDTKQWELVLYAFSDSSELTNLETLLVQLAPSKCFLSAELS--QDPHVGDSKKVHALLQTLDVANVYIKKHAFKDTGLEGNLTKLLGVSSLASYKNELDMQLAVGSLACLIDSLELMSDADGFGC------------------YALAGGSLSSAMQLDSAAIWSLNLLPDPSVKSSSRFGGSVLEILNR 213          
BLAST of mRNA_L-elsbetiae_contig6977.15755.1 vs. uniprot
Match: A0A2D4BV25_PYTIN (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BV25_PYTIN)

HSP 1 Score: 94.4 bits (233), Expect = 1.990e-18
Identity = 79/244 (32.38%), Postives = 116/244 (47.54%), Query Frame = 0
Query:    1 MSDSPLRALGSSGGKDEVDRPIVALKFKLAKHQRTVGVAARLPRQR------EGMEDKVRWTLVVYEFLDNDQFSNLDTLMLQLAPGRCLLSLDAGAIEGKPRGDMAKVLAAMERLDVTVKDVKATHFKTDDVGARMRALLGDASLAQHSLATEQPVGTACLAALMGHLERKGG-DGXXXXXXXXXXXXXXSPEMAPSYALVQGTLQKHLRLDSAAAAAVTLLPDPTAPHQY---GSLYGVLNR 234
            MSD+ L  L +S    E+     AL+ K  KH + VGVA   PR R      +  ED   W LVV+EF D+ +F+NL+TL++Q+ P +C L   A  ++    GD  K+ A ++  ++   ++K   FK   + A +  LLGDASLAQ+       +    LA L+   +     DG                     Y L  G L   ++LD+AA  ++ LLPDPT        GS+  +LNR
Sbjct:    1 MSDTEL--LDASAPAAEI-----ALQIKNTKHLKHVGVALCRPRLRRSCVKGQSNEDTKHWELVVFEFSDSSEFTNLETLLVQVMPSKCYLP--AELMQEPLIGDGKKINALLQAQEIVGVEMKKKAFKDTALEANLPRLLGDASLAQYKSEMGMTLAMGSLACLVDARDMMSDTDGFGC------------------YTLSSGNLSSAMQLDTAAIWSLNLLPDPTMKSSSRLGGSVLDILNR 217          
BLAST of mRNA_L-elsbetiae_contig6977.15755.1 vs. uniprot
Match: UPI0018D7A8D4 (DNA mismatch repair protein Msh2-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D7A8D4)

HSP 1 Score: 79.3 bits (194), Expect = 2.440e-13
Identity = 65/192 (33.85%), Postives = 95/192 (49.48%), Query Frame = 0
Query:   48 GMEDKVRWTLVVYEFLDNDQFSNLDTLMLQLAPGRCLLSLDAGAIEGKPRGDMAKVLAAMERLDVTVKDVKATHFKTDDVGARMRALLGDASLAQHSLAT----EQPVGTACLAALMGHLERKGGDGXXXXXXXXXXXXXXSPEMAPSYALVQGTLQKHLRLDSAAAAAVTLLPDPT-APHQYGSLYGVLNR 234
            G  D     L V +F DN+QFSNL+ L++QL P  CLL   +G  EG    + AK+ + +ER  + V + K   F T DV   +  LL  AS  Q + A+    E+    A LAAL+ +LE  G +                      + L    L ++++LDSAA  A++LLP P  A ++  SL G+LN+
Sbjct:  163 GYADATLRELAVCQFADNEQFSNLEALLVQLGPKECLLPAQSG--EGA--AESAKLKSVLERSGLLVTERKKAEFGTKDVEQDLNRLLKGASEEQRNAASLAEMEKLHAMASLAALIKYLELLGDESNFN-----------------QFRLKTFDLSQYMKLDSAAVRALSLLPSPQDAGNKNASLLGLLNK 333          
BLAST of mRNA_L-elsbetiae_contig6977.15755.1 vs. uniprot
Match: A0A556TJE3_BAGYA (F-box only protein 11 n=2 Tax=Clupeocephala TaxID=186625 RepID=A0A556TJE3_BAGYA)

HSP 1 Score: 79.3 bits (194), Expect = 2.680e-13
Identity = 70/234 (29.91%), Postives = 104/234 (44.44%), Query Frame = 0
Query:   10 GSSGGKDEVDRPIVALKFKLAKH-QRTVGVAARLPRQREGMEDKVRWTLVVYEFLDNDQFSNLDTLMLQLAPGRCLLSLDAGAIEGKPRGDMAKVLAAMERLDVTVKDVKATHFKTDDVGARMRALL----GDASLAQHSLATEQPVGTACLAALMGHLERKGGDGXXXXXXXXXXXXXXSPEMAPSYALVQGTLQKHLRLDSAAAAAVTLLP----DPTAPHQYGSLYGVLNR 234
            GS GG  E    +V ++       QR VGV         G  D +   L V EF DNDQFSNL+ L++Q+ P  C+L        G   GD+ K+   ++R  +   D K T F T D+   +  LL    G+ + +      E+ +  +CLAA++ +LE    D                     S+ +    L +++RLD+AA  A+ L      DPT  H   SL G+LN+
Sbjct:  135 GSGGGLGEGAAGVVGVRIGTGSDGQRVVGV---------GYVDSILRKLGVCEFPDNDQFSNLEALLVQIGPKECVLPA------GDAAGDLGKLKQVVQRGGILFSDRKKTEFTTRDIVQDLNRLLKAPKGEMASSAALPEMEKQIAMSCLAAVIKYLELLSDDANFG-----------------SFKMTTFDLNQYMRLDNAAVQALNLFQASSDDPTGTH---SLAGLLNK 333          
BLAST of mRNA_L-elsbetiae_contig6977.15755.1 vs. uniprot
Match: A0A3N2PMJ7_9PEZI (DNA mismatch repair protein msh-2 n=1 Tax=Sodiomyces alkalinus F11 TaxID=1314773 RepID=A0A3N2PMJ7_9PEZI)

HSP 1 Score: 77.8 bits (190), Expect = 8.160e-13
Identity = 67/223 (30.04%), Postives = 99/223 (44.39%), Query Frame = 0
Query:   13 GGKDEVDRPIVALK-FKLAKHQRTVGVAARLPRQREGMEDKVRWTLVVYEFLDNDQFSNLDTLMLQLAPGRCLLSLDAGAIEGKPRGDMAKVLAAMERLDVTVKDVKATHFKTDDVGARMRALLGDASLAQHSLATEQPVGTACLAALMGHLERKGGDGXXXXXXXXXXXXXXSPEMAPSYALVQGTLQKHLRLDSAAAAAVTLLPDPTAPHQYGSLYGVLNR 234
            GG+ E    I+A+K    A   R+VGV       RE         L V EFLDND +SN ++L++QL    CL+ +D G  E  P  D+AK+   ++   V + +  A+ F   D+   +  LL D   A     T+  +     AAL+ +L                      P     Y L Q  L + ++LD+AA  A+ L+P P    +  SLYG+LN 
Sbjct:  127 GGQFEAAPMILAVKVMSKAAEARSVGVCFADASVRE---------LGVSEFLDNDLYSNFESLLIQLGVRECLIQVDRGEKEKDP--DLAKLRQIIDNCGVAISERPASDFGIKDIEQDLARLLKDEKAATLMPQTDLNLAMGSAAALIKYL-----------------GVLHDPSNFGQYQLYQHDLAQFMKLDAAALKALNLMPGPRDGSKTMSLYGLLNH 321          
BLAST of mRNA_L-elsbetiae_contig6977.15755.1 vs. uniprot
Match: A0A7J6APT8_AMEME (MUTSd domain-containing protein n=1 Tax=Ameiurus melas TaxID=219545 RepID=A0A7J6APT8_AMEME)

HSP 1 Score: 75.9 bits (185), Expect = 3.060e-12
Identity = 68/234 (29.06%), Postives = 103/234 (44.02%), Query Frame = 0
Query:   10 GSSGGKDEVDRPIVALKFKLAKH-QRTVGVAARLPRQREGMEDKVRWTLVVYEFLDNDQFSNLDTLMLQLAPGRCLLSLDAGAIEGKPRGDMAKVLAAMERLDVTVKDVKATHFKTDDVGARMRALL----GDASLAQHSLATEQPVGTACLAALMGHLERKGGDGXXXXXXXXXXXXXXSPEMAPSYALVQGTLQKHLRLDSAAAAAVTLLP----DPTAPHQYGSLYGVLNR 234
            GS GG  E    +V ++       QR VGV         G  D +   L V EF DNDQFSNL+ L++Q+ P  C+L        G   GD+ K+   ++R  + + D K   F T D+   +  LL    G+   +      E+ +  +CLAA++ +LE    +                     S+ +    L +++RLD+AA  A+ L      DPT  H   SL G+LN+
Sbjct:  136 GSGGGLGEGAAGVVGIRVGTGSDGQRVVGV---------GYVDSILRKLGVCEFPDNDQFSNLEALLVQIGPKECVLPA------GDTVGDLGKLRQVVQRGGILLSDRKKAEFTTKDIVQDLNRLLKARKGETVSSAALPEMEKQIAVSCLAAVIKYLELLSDEANFS-----------------SFKMTTFDLSQYMRLDNAAVQALNLFQAASDDPTGTH---SLAGLLNK 334          
BLAST of mRNA_L-elsbetiae_contig6977.15755.1 vs. uniprot
Match: A0A5C6GMW7_9HYPO (MutS-like protein n=15 Tax=Clavicipitaceae TaxID=34397 RepID=A0A5C6GMW7_9HYPO)

HSP 1 Score: 75.5 bits (184), Expect = 5.010e-12
Identity = 67/223 (30.04%), Postives = 97/223 (43.50%), Query Frame = 0
Query:   13 GGKDEVDRPIVALKFKL-AKHQRTVGVAARLPRQREGMEDKVRWTLVVYEFLDNDQFSNLDTLMLQLAPGRCLLSLDAGAIEGKPRGDMAKVLAAMERLDVTVKDVKATHFKTDDVGARMRALLGDASLAQHSLATEQPVGTACLAALMGHLERKGGDGXXXXXXXXXXXXXXSPEMAPSYALVQGTLQKHLRLDSAAAAAVTLLPDPTAPHQYGSLYGVLNR 234
            GG+ E    IVA+K    A   R VGV       RE         L V EFLDND +SN ++L++QL    C++ LD G  E  P  ++AK+   ++   V + +  A  F T D+   +  LL D         T+  +     A+L+ +L                      P     Y L Q  L + ++LD+AA  A+ L+P P    +  SLYGVLN 
Sbjct:  127 GGQIESAPMIVAVKISARASEARKVGVCFADASVRE---------LGVSEFLDNDLYSNFESLLIQLGVRECIIQLDKGEKEKDP--ELAKLRQIIDNCGVAIAERPAGDFGTRDIEQDLARLLKDDKSVNLLPQTDLKLAMGSAASLIKYL-----------------GVLQDPSNFGQYQLYQHDLAQFMKLDAAALKALNLMPGPRDGSKTMSLYGVLNH 321          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6977.15755.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7H3_9PHAE5.940e-11278.21DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
A0A835YUY7_9STRA1.700e-3539.55Muts protein-like protein 2A n=1 Tax=Tribonema min... [more]
A0A7S2UZG6_9STRA6.570e-2850.88Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A8K1FEG9_PYTOL5.210e-2234.20Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BV25_PYTIN1.990e-1832.38DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
UPI0018D7A8D42.440e-1333.85DNA mismatch repair protein Msh2-like n=1 Tax=Pati... [more]
A0A556TJE3_BAGYA2.680e-1329.91F-box only protein 11 n=2 Tax=Clupeocephala TaxID=... [more]
A0A3N2PMJ7_9PEZI8.160e-1330.04DNA mismatch repair protein msh-2 n=1 Tax=Sodiomyc... [more]
A0A7J6APT8_AMEME3.060e-1229.06MUTSd domain-containing protein n=1 Tax=Ameiurus m... [more]
A0A5C6GMW7_9HYPO5.010e-1230.04MutS-like protein n=15 Tax=Clavicipitaceae TaxID=3... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036678MutS, connector domain superfamilyGENE3D3.30.420.110coord: 8..173
e-value: 9.6E-25
score: 89.3
NoneNo IPR availablePANTHERPTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERcoord: 49..234
IPR032642DNA mismatch repair protein Msh2PANTHERPTHR11361:SF35DNA MISMATCH REPAIR PROTEIN MSH2coord: 49..234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6977contigL-elsbetiae_contig6977:514..5595 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6977.15755.1mRNA_L-elsbetiae_contig6977.15755.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6977 514..5684 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6977.15755.1 ID=prot_L-elsbetiae_contig6977.15755.1|Name=mRNA_L-elsbetiae_contig6977.15755.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=235bp
MSDSPLRALGSSGGKDEVDRPIVALKFKLAKHQRTVGVAARLPRQREGME
DKVRWTLVVYEFLDNDQFSNLDTLMLQLAPGRCLLSLDAGAIEGKPRGDM
AKVLAAMERLDVTVKDVKATHFKTDDVGARMRALLGDASLAQHSLATEQP
VGTACLAALMGHLERKGGDGDVDNEEGEGEGEGESPEMAPSYALVQGTLQ
KHLRLDSAAAAAVTLLPDPTAPHQYGSLYGVLNR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036678MutS_con_dom_sf
IPR032642Msh2