mRNA_L-elsbetiae_contig10102.157.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10102.157.1 vs. uniprot
Match: D8LS40_ECTSI (Rab50, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS40_ECTSI) HSP 1 Score: 409 bits (1051), Expect = 5.970e-144 Identity = 203/213 (95.31%), Postives = 208/213 (97.65%), Query Frame = 1 Query: 1 QVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEHFATEVGGILCETSAKENWGVNELFARVCDRAMETRGPELRGETSGGAAGAGARKSKFGLSPAAHAAGFGGDSGGETAGGCCG 639 +VVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEHFATEVGGI+CETSAKENWGVNELFARVCDRAMETRGPELRG+ SGGAAG G RKSKFGLSPAAHAAGFGGD+G E+ GGCCG Sbjct: 14 KVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEHFATEVGGIICETSAKENWGVNELFARVCDRAMETRGPELRGQASGGAAGTGGRKSKFGLSPAAHAAGFGGDTGAESGGGCCG 226
BLAST of mRNA_L-elsbetiae_contig10102.157.1 vs. uniprot
Match: A0A7S2XTR6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XTR6_9STRA) HSP 1 Score: 278 bits (710), Expect = 1.490e-92 Identity = 131/170 (77.06%), Postives = 149/170 (87.65%), Query Frame = 1 Query: 1 QVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEHFATEVGGILCETSAKENWGVNELFARVCDRAMETRGPEL 510 +VVVLGDKGVGKTCLVLRFIEGYF+PKQQSTIGAFFLTK+I G CKMQIWDTAGQERFRAMAP+YYRNAA A+VCFDI DE+SF KMKDWVEEL+TNVPEGKLVLAIAC KTD+ES RVVSRARAE ++ + I CETSAKENWGVNE+F +V ++ +ETRG ++ Sbjct: 14 KVVVLGDKGVGKTCLVLRFIEGYFSPKQQSTIGAFFLTKKIQTEGGVNCKMQIWDTAGQERFRAMAPMYYRNAAAAIVCFDITDEDSFTKMKDWVEELKTNVPEGKLVLAIACNKTDLESNRVVSRARAEQYSAAIKAIYCETSAKENWGVNEIFEKVSEKVIETRGLQV 183
BLAST of mRNA_L-elsbetiae_contig10102.157.1 vs. uniprot
Match: A0A7S3Y4J2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4J2_HETAK) HSP 1 Score: 275 bits (703), Expect = 7.700e-91 Identity = 132/182 (72.53%), Postives = 149/182 (81.87%), Query Frame = 1 Query: 1 QVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEHFATEVGGILCETSAKENWGVNELFARVCDRAMETRGPELRGETSGGAAGAG 546 +VVVLGDKGVGK+CLVLRFIEGYF+PKQQSTIGAFFL+K I A DGT CKMQIWDTAGQERFRAMA +YYRNAA A+VCFDI DEESF KMKDWV+EL+ NVPEG+LVLAIA TKTD+E++R VSR RAE +A +G + CETSAKENWGV E+F R +E RGPELR A G G Sbjct: 15 KVVVLGDKGVGKSCLVLRFIEGYFSPKQQSTIGAFFLSKTIEAADGTACKMQIWDTAGQERFRAMASMYYRNAAAAIVCFDITDEESFSKMKDWVQELKANVPEGRLVLAIAATKTDLEAQRAVSRGRAEQYAQSIGALCCETSAKENWGVTEVFEAAAARVLELRGPELRAAAQAQARGVG 196
BLAST of mRNA_L-elsbetiae_contig10102.157.1 vs. uniprot
Match: F0XY01_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XY01_AURAN) HSP 1 Score: 240 bits (612), Expect = 3.350e-77 Identity = 125/202 (61.88%), Postives = 152/202 (75.25%), Query Frame = 1 Query: 1 QVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEHFATEVGGILCETSAKENWGVNELFARVCDRAMETRGPEL---RGETSGGAAGAGARKSKFGLSPAAHAAGF 597 ++V+LGD+GVGKTCLVLRFIEG + +QQSTIGAFFLTK+I G CK+QIWDTAGQERFRAMAP+YYRNAA A+VCFD+ DE +F MKDWVEEL+TNV + LV+AIAC K D+++++V SRARAE FA + I+ +TSAKEN+GV ELFA V + ++ RG EL G GG G G R GLS AA AAGF Sbjct: 12 KIVLLGDRGVGKTCLVLRFIEGLYNSRQQSTIGAFFLTKKIVTAQGDACKIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDVTDESTFNTMKDWVEELKTNVVDKNLVIAIACNKADLDTRQV-SRARAEQFARSISAIVLDTSAKENFGVAELFAAVSEHVIKLRGQELCSTPGAPRGGGGGPGGR----GLSLAARAAGF 208
BLAST of mRNA_L-elsbetiae_contig10102.157.1 vs. uniprot
Match: A0A835ZBF8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBF8_9STRA) HSP 1 Score: 231 bits (590), Expect = 1.150e-74 Identity = 111/163 (68.10%), Postives = 131/163 (80.37%), Query Frame = 1 Query: 1 QVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGK--LVLAIACTKTDMESKRVVSRARAEHFATEVGGILCETSAKENWGVNELFARVCDR 483 ++ VLGDKGVGKTCLVLRFIEGYF+ QQSTIGAFFLTK + +G +CK+QIWDTAGQERFRAMAP+YYRNAA A+VC DI DEESF KMKDWVEE++ NVP G+ L + +A KTD+E +RVVSRARAE FA +G + ETSA+ENWGV LF C+R Sbjct: 3 KICVLGDKGVGKTCLVLRFIEGYFSQNQQSTIGAFFLTKSLPV-NGVLCKLQIWDTAGQERFRAMAPMYYRNAAAAIVCCDITDEESFDKMKDWVEEIKMNVPVGQQGLAIVLALNKTDLEERRVVSRARAEEFAASIGAAVVETSARENWGVARLFECACER 164
BLAST of mRNA_L-elsbetiae_contig10102.157.1 vs. uniprot
Match: A0A7S2BGJ2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BGJ2_9STRA) HSP 1 Score: 232 bits (592), Expect = 5.030e-74 Identity = 112/162 (69.14%), Postives = 131/162 (80.86%), Query Frame = 1 Query: 25 GVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEHFATEVGGILCETSAKENWGVNELFARVCDRAMETRGPEL 510 GVGKTCLVLRFIEG F KQQSTIGAFFLTK++ DG++CK+QIWDTAGQERFRAMAP+YYRNAA A+VCFDI DE SF MKDWV+ELR N + L+LAIAC K D+ S RVVSR RAE FA+ + IL +TSAKEN GVNELF +V +R +E++G EL Sbjct: 17 GVGKTCLVLRFIEGTFTQKQQSTIGAFFLTKKVQLEDGSMCKIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDITDENSFSTMKDWVQELRRNCQDRDLILAIACNKADLSSTRVVSRERAESFASSIKAILMDTSAKENEGVNELFQKVTERVIESQGEEL 178
BLAST of mRNA_L-elsbetiae_contig10102.157.1 vs. uniprot
Match: A0A7S3NK22_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NK22_9STRA) HSP 1 Score: 232 bits (591), Expect = 5.160e-74 Identity = 109/175 (62.29%), Postives = 142/175 (81.14%), Query Frame = 1 Query: 1 QVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEHFATEVGGILCETSAKENWGVNELFARVCDRAMETRGPELRGETS 525 ++V+LGD+GVGKTCLVLRFIEG + +QQSTIGAFFLTK+I ++G CK+QIWDTAGQERFRAMAP+YYRNAA A+VCFD+ DE +F MKDWVEEL+TNV + LV+AIAC K D+++++V SRARAE FA + I+ +TSAKEN+GV+ELF V ++ + RG EL +++ Sbjct: 17 KIVLLGDRGVGKTCLVLRFIEGLYNSRQQSTIGAFFLTKKIVTSNGDACKIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDVTDESTFNTMKDWVEELKTNVVDKNLVIAIACNKADLDTRQV-SRARAESFARSIDAIILDTSAKENFGVSELFTAVSEQVITLRGHELEAQSN 190
BLAST of mRNA_L-elsbetiae_contig10102.157.1 vs. uniprot
Match: A0A7S3ZPM5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPM5_9STRA) HSP 1 Score: 219 bits (557), Expect = 6.320e-69 Identity = 108/171 (63.16%), Postives = 133/171 (77.78%), Query Frame = 1 Query: 1 QVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEHFATEVG-GILCETSAKENWGVNELFARVCDRAMETRGPEL 510 +VV+LGD+GVGKTCLVLRFIEG + +QQSTIGAFFLTK+I G CK+QIWDTAGQERFRAMAP+YYRNAA AVVCFD D+ +FQ M+ WVEELR NV + KLV+AIA TK+D++ R +R +AE FA+ + ++ ETSAK + GV ELFA V +R +E RG EL Sbjct: 17 KVVLLGDRGVGKTCLVLRFIEGLYNARQQSTIGAFFLTKKIKTARGDDCKIQIWDTAGQERFRAMAPMYYRNAAAAVVCFDGTDQRTFQTMRTWVEELRANVDDKKLVIAIAITKSDLDENRAETRRKAEEFASSINDALVLETSAKNDVGVRELFATVAERVIELRGEEL 187
BLAST of mRNA_L-elsbetiae_contig10102.157.1 vs. uniprot
Match: A0A7R9U6V0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6V0_9STRA) HSP 1 Score: 187 bits (476), Expect = 1.560e-56 Identity = 90/174 (51.72%), Postives = 119/174 (68.39%), Query Frame = 1 Query: 1 QVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEHFATEVGGILCETSAKENWGVNELFARVCDRAMETRGPELRGET 522 +VVV+G+K VGKT LVLRFI+G F P+QQ TIGAFF +K + G C +Q+WDTAGQERFRA+ P+YYR A A+VCFD+ E SF+ M+ WV+ELR N G +V+AIA TK D+E+ RVV + +A +G + ETSAK N GV +LF + R +E + + R ET Sbjct: 10 KVVVVGEKSVGKTSLVLRFIDGCFQPQQQPTIGAFFFSKHLVLAGGAACVLQVWDTAGQERFRAITPMYYRQAMGAIVCFDVTSEASFETMQGWVKELRENTEPGSIVIAIAATKADLEAARVVDQEGPRLYAASIGALYAETSAKANVGVQDLFVTLGQRMLEKQLQKQRMET 183
BLAST of mRNA_L-elsbetiae_contig10102.157.1 vs. uniprot
Match: A0A8J5XZ05_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XZ05_DIALT) HSP 1 Score: 179 bits (455), Expect = 1.010e-53 Identity = 93/171 (54.39%), Postives = 118/171 (69.01%), Query Frame = 1 Query: 1 QVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEHFATEVGGILCETSAKENWGVNELFARVCDRAMETRGPELR 513 +VVVLG GVGKTC+ RF++ FAP STIGA FL K++T +G +QIWDTAGQERFR+MAPLYYR A A++ FDI ++ SF KMK+WV EL+ NV E LVLAIAC K D+ +RVV +A +A ++G I+ ETSAKEN GV+ LF V R T+ L+ Sbjct: 8 KVVVLGSSGVGKTCIACRFVKNQFAPYIASTIGASFLVKEVTV-NGQKITLQIWDTAGQERFRSMAPLYYRGAVAAILVFDITNDVSFDKMKEWVRELQANVEEP-LVLAIACNKADLREQRVVQFEQAAQYAAKIGAIIVETSAKENVGVDALFMDVSKRLAATKFRSLK 176 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10102.157.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10102.157.1 >prot_L-elsbetiae_contig10102.157.1 ID=prot_L-elsbetiae_contig10102.157.1|Name=mRNA_L-elsbetiae_contig10102.157.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=214bp QVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKback to top mRNA from alignment at L-elsbetiae_contig10102:1058..3251+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10102.157.1 ID=mRNA_L-elsbetiae_contig10102.157.1|Name=mRNA_L-elsbetiae_contig10102.157.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2194bp|location=Sequence derived from alignment at L-elsbetiae_contig10102:1058..3251+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10102:1058..3251+ >mRNA_L-elsbetiae_contig10102.157.1 ID=mRNA_L-elsbetiae_contig10102.157.1|Name=mRNA_L-elsbetiae_contig10102.157.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1284bp|location=Sequence derived from alignment at L-elsbetiae_contig10102:1058..3251+ (Laminarionema elsbetiae ELsaHSoW15)back to top |