prot_L-elsbetiae_contig10102.157.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10102.157.1
Unique Nameprot_L-elsbetiae_contig10102.157.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length214
Homology
BLAST of mRNA_L-elsbetiae_contig10102.157.1 vs. uniprot
Match: D8LS40_ECTSI (Rab50, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS40_ECTSI)

HSP 1 Score: 409 bits (1051), Expect = 5.970e-144
Identity = 203/213 (95.31%), Postives = 208/213 (97.65%), Query Frame = 0
Query:    1 QVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEHFATEVGGILCETSAKENWGVNELFARVCDRAMETRGPELRGETSGGAAGAGARKSKFGLSPAAHAAGFGGDSGGETAGGCCG 213
            +VVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEHFATEVGGI+CETSAKENWGVNELFARVCDRAMETRGPELRG+ SGGAAG G RKSKFGLSPAAHAAGFGGD+G E+ GGCCG
Sbjct:   14 KVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEHFATEVGGIICETSAKENWGVNELFARVCDRAMETRGPELRGQASGGAAGTGGRKSKFGLSPAAHAAGFGGDTGAESGGGCCG 226          
BLAST of mRNA_L-elsbetiae_contig10102.157.1 vs. uniprot
Match: A0A7S2XTR6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XTR6_9STRA)

HSP 1 Score: 278 bits (710), Expect = 1.490e-92
Identity = 131/170 (77.06%), Postives = 149/170 (87.65%), Query Frame = 0
Query:    1 QVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEHFATEVGGILCETSAKENWGVNELFARVCDRAMETRGPEL 170
            +VVVLGDKGVGKTCLVLRFIEGYF+PKQQSTIGAFFLTK+I    G  CKMQIWDTAGQERFRAMAP+YYRNAA A+VCFDI DE+SF KMKDWVEEL+TNVPEGKLVLAIAC KTD+ES RVVSRARAE ++  +  I CETSAKENWGVNE+F +V ++ +ETRG ++
Sbjct:   14 KVVVLGDKGVGKTCLVLRFIEGYFSPKQQSTIGAFFLTKKIQTEGGVNCKMQIWDTAGQERFRAMAPMYYRNAAAAIVCFDITDEDSFTKMKDWVEELKTNVPEGKLVLAIACNKTDLESNRVVSRARAEQYSAAIKAIYCETSAKENWGVNEIFEKVSEKVIETRGLQV 183          
BLAST of mRNA_L-elsbetiae_contig10102.157.1 vs. uniprot
Match: A0A7S3Y4J2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4J2_HETAK)

HSP 1 Score: 275 bits (703), Expect = 7.700e-91
Identity = 132/182 (72.53%), Postives = 149/182 (81.87%), Query Frame = 0
Query:    1 QVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEHFATEVGGILCETSAKENWGVNELFARVCDRAMETRGPELRGETSGGAAGAG 182
            +VVVLGDKGVGK+CLVLRFIEGYF+PKQQSTIGAFFL+K I A DGT CKMQIWDTAGQERFRAMA +YYRNAA A+VCFDI DEESF KMKDWV+EL+ NVPEG+LVLAIA TKTD+E++R VSR RAE +A  +G + CETSAKENWGV E+F     R +E RGPELR      A G G
Sbjct:   15 KVVVLGDKGVGKSCLVLRFIEGYFSPKQQSTIGAFFLSKTIEAADGTACKMQIWDTAGQERFRAMASMYYRNAAAAIVCFDITDEESFSKMKDWVQELKANVPEGRLVLAIAATKTDLEAQRAVSRGRAEQYAQSIGALCCETSAKENWGVTEVFEAAAARVLELRGPELRAAAQAQARGVG 196          
BLAST of mRNA_L-elsbetiae_contig10102.157.1 vs. uniprot
Match: F0XY01_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XY01_AURAN)

HSP 1 Score: 240 bits (612), Expect = 3.350e-77
Identity = 125/202 (61.88%), Postives = 152/202 (75.25%), Query Frame = 0
Query:    1 QVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEHFATEVGGILCETSAKENWGVNELFARVCDRAMETRGPEL---RGETSGGAAGAGARKSKFGLSPAAHAAGF 199
            ++V+LGD+GVGKTCLVLRFIEG +  +QQSTIGAFFLTK+I    G  CK+QIWDTAGQERFRAMAP+YYRNAA A+VCFD+ DE +F  MKDWVEEL+TNV +  LV+AIAC K D+++++V SRARAE FA  +  I+ +TSAKEN+GV ELFA V +  ++ RG EL    G   GG  G G R    GLS AA AAGF
Sbjct:   12 KIVLLGDRGVGKTCLVLRFIEGLYNSRQQSTIGAFFLTKKIVTAQGDACKIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDVTDESTFNTMKDWVEELKTNVVDKNLVIAIACNKADLDTRQV-SRARAEQFARSISAIVLDTSAKENFGVAELFAAVSEHVIKLRGQELCSTPGAPRGGGGGPGGR----GLSLAARAAGF 208          
BLAST of mRNA_L-elsbetiae_contig10102.157.1 vs. uniprot
Match: A0A835ZBF8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBF8_9STRA)

HSP 1 Score: 231 bits (590), Expect = 1.150e-74
Identity = 111/163 (68.10%), Postives = 131/163 (80.37%), Query Frame = 0
Query:    1 QVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGK--LVLAIACTKTDMESKRVVSRARAEHFATEVGGILCETSAKENWGVNELFARVCDR 161
            ++ VLGDKGVGKTCLVLRFIEGYF+  QQSTIGAFFLTK +   +G +CK+QIWDTAGQERFRAMAP+YYRNAA A+VC DI DEESF KMKDWVEE++ NVP G+  L + +A  KTD+E +RVVSRARAE FA  +G  + ETSA+ENWGV  LF   C+R
Sbjct:    3 KICVLGDKGVGKTCLVLRFIEGYFSQNQQSTIGAFFLTKSLPV-NGVLCKLQIWDTAGQERFRAMAPMYYRNAAAAIVCCDITDEESFDKMKDWVEEIKMNVPVGQQGLAIVLALNKTDLEERRVVSRARAEEFAASIGAAVVETSARENWGVARLFECACER 164          
BLAST of mRNA_L-elsbetiae_contig10102.157.1 vs. uniprot
Match: A0A7S2BGJ2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BGJ2_9STRA)

HSP 1 Score: 232 bits (592), Expect = 5.030e-74
Identity = 112/162 (69.14%), Postives = 131/162 (80.86%), Query Frame = 0
Query:    9 GVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEHFATEVGGILCETSAKENWGVNELFARVCDRAMETRGPEL 170
            GVGKTCLVLRFIEG F  KQQSTIGAFFLTK++   DG++CK+QIWDTAGQERFRAMAP+YYRNAA A+VCFDI DE SF  MKDWV+ELR N  +  L+LAIAC K D+ S RVVSR RAE FA+ +  IL +TSAKEN GVNELF +V +R +E++G EL
Sbjct:   17 GVGKTCLVLRFIEGTFTQKQQSTIGAFFLTKKVQLEDGSMCKIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDITDENSFSTMKDWVQELRRNCQDRDLILAIACNKADLSSTRVVSRERAESFASSIKAILMDTSAKENEGVNELFQKVTERVIESQGEEL 178          
BLAST of mRNA_L-elsbetiae_contig10102.157.1 vs. uniprot
Match: A0A7S3NK22_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NK22_9STRA)

HSP 1 Score: 232 bits (591), Expect = 5.160e-74
Identity = 109/175 (62.29%), Postives = 142/175 (81.14%), Query Frame = 0
Query:    1 QVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEHFATEVGGILCETSAKENWGVNELFARVCDRAMETRGPELRGETS 175
            ++V+LGD+GVGKTCLVLRFIEG +  +QQSTIGAFFLTK+I  ++G  CK+QIWDTAGQERFRAMAP+YYRNAA A+VCFD+ DE +F  MKDWVEEL+TNV +  LV+AIAC K D+++++V SRARAE FA  +  I+ +TSAKEN+GV+ELF  V ++ +  RG EL  +++
Sbjct:   17 KIVLLGDRGVGKTCLVLRFIEGLYNSRQQSTIGAFFLTKKIVTSNGDACKIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDVTDESTFNTMKDWVEELKTNVVDKNLVIAIACNKADLDTRQV-SRARAESFARSIDAIILDTSAKENFGVSELFTAVSEQVITLRGHELEAQSN 190          
BLAST of mRNA_L-elsbetiae_contig10102.157.1 vs. uniprot
Match: A0A7S3ZPM5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPM5_9STRA)

HSP 1 Score: 219 bits (557), Expect = 6.320e-69
Identity = 108/171 (63.16%), Postives = 133/171 (77.78%), Query Frame = 0
Query:    1 QVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEHFATEVG-GILCETSAKENWGVNELFARVCDRAMETRGPEL 170
            +VV+LGD+GVGKTCLVLRFIEG +  +QQSTIGAFFLTK+I    G  CK+QIWDTAGQERFRAMAP+YYRNAA AVVCFD  D+ +FQ M+ WVEELR NV + KLV+AIA TK+D++  R  +R +AE FA+ +   ++ ETSAK + GV ELFA V +R +E RG EL
Sbjct:   17 KVVLLGDRGVGKTCLVLRFIEGLYNARQQSTIGAFFLTKKIKTARGDDCKIQIWDTAGQERFRAMAPMYYRNAAAAVVCFDGTDQRTFQTMRTWVEELRANVDDKKLVIAIAITKSDLDENRAETRRKAEEFASSINDALVLETSAKNDVGVRELFATVAERVIELRGEEL 187          
BLAST of mRNA_L-elsbetiae_contig10102.157.1 vs. uniprot
Match: A0A7R9U6V0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6V0_9STRA)

HSP 1 Score: 187 bits (476), Expect = 1.560e-56
Identity = 90/174 (51.72%), Postives = 119/174 (68.39%), Query Frame = 0
Query:    1 QVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEHFATEVGGILCETSAKENWGVNELFARVCDRAMETRGPELRGET 174
            +VVV+G+K VGKT LVLRFI+G F P+QQ TIGAFF +K +    G  C +Q+WDTAGQERFRA+ P+YYR A  A+VCFD+  E SF+ M+ WV+ELR N   G +V+AIA TK D+E+ RVV +     +A  +G +  ETSAK N GV +LF  +  R +E +  + R ET
Sbjct:   10 KVVVVGEKSVGKTSLVLRFIDGCFQPQQQPTIGAFFFSKHLVLAGGAACVLQVWDTAGQERFRAITPMYYRQAMGAIVCFDVTSEASFETMQGWVKELRENTEPGSIVIAIAATKADLEAARVVDQEGPRLYAASIGALYAETSAKANVGVQDLFVTLGQRMLEKQLQKQRMET 183          
BLAST of mRNA_L-elsbetiae_contig10102.157.1 vs. uniprot
Match: A0A8J5XZ05_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XZ05_DIALT)

HSP 1 Score: 179 bits (455), Expect = 1.010e-53
Identity = 93/171 (54.39%), Postives = 118/171 (69.01%), Query Frame = 0
Query:    1 QVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEHFATEVGGILCETSAKENWGVNELFARVCDRAMETRGPELR 171
            +VVVLG  GVGKTC+  RF++  FAP   STIGA FL K++T  +G    +QIWDTAGQERFR+MAPLYYR A  A++ FDI ++ SF KMK+WV EL+ NV E  LVLAIAC K D+  +RVV   +A  +A ++G I+ ETSAKEN GV+ LF  V  R   T+   L+
Sbjct:    8 KVVVLGSSGVGKTCIACRFVKNQFAPYIASTIGASFLVKEVTV-NGQKITLQIWDTAGQERFRSMAPLYYRGAVAAILVFDITNDVSFDKMKEWVRELQANVEEP-LVLAIACNKADLREQRVVQFEQAAQYAAKIGAIIVETSAKENVGVDALFMDVSKRLAATKFRSLK 176          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10102.157.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS40_ECTSI5.970e-14495.31Rab50, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S2XTR6_9STRA1.490e-9277.06Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S3Y4J2_HETAK7.700e-9172.53Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
F0XY01_AURAN3.350e-7761.88Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A835ZBF8_9STRA1.150e-7468.10P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S2BGJ2_9STRA5.030e-7469.14Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3NK22_9STRA5.160e-7462.29Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S3ZPM5_9STRA6.320e-6963.16Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7R9U6V0_9STRA1.560e-5651.72Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A8J5XZ05_DIALT1.010e-5354.39Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 23..39
score: 29.94
coord: 42..64
score: 49.49
coord: 140..162
score: 31.84
coord: 105..118
score: 19.15
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 2..165
e-value: 3.0E-18
score: 76.6
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 2..165
e-value: 8.0E-11
score: 19.2
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 5..205
e-value: 0.0012
score: 3.8
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 1..165
e-value: 5.3E-60
score: 215.3
NoneNo IPR availableGENE3D3.40.50.300coord: 1..175
e-value: 7.2E-55
score: 187.3
NoneNo IPR availablePANTHERPTHR24073:SF366RAS-RELATED PROTEIN RAB-5Ccoord: 2..167
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 2..167
NoneNo IPR availablePROSITEPS51419RABcoord: 1..212
score: 27.204
IPR001806Small GTPasePFAMPF00071Rascoord: 2..162
e-value: 1.4E-50
score: 171.1
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 2..155
e-value: 1.2E-22
score: 78.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10102contigL-elsbetiae_contig10102:1058..3251 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10102.157.1mRNA_L-elsbetiae_contig10102.157.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10102 1058..3251 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10102.157.1 ID=prot_L-elsbetiae_contig10102.157.1|Name=mRNA_L-elsbetiae_contig10102.157.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=214bp
QVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICK
MQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRT
NVPEGKLVLAIACTKTDMESKRVVSRARAEHFATEVGGILCETSAKENWG
VNELFARVCDRAMETRGPELRGETSGGAAGAGARKSKFGLSPAAHAAGFG
GDSGGETAGGCCG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase